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Dally-like, isoform A (LD47466p)

 Q9VUG1_DROME            Unreviewed;       765 AA.
Q9VUG1; Q960K1;
01-MAY-2000, integrated into UniProtKB/TrEMBL.
01-OCT-2002, sequence version 2.
10-OCT-2018, entry version 141.
SubName: Full=Dally-like, isoform A {ECO:0000313|EMBL:AAF49722.2};
SubName: Full=LD47466p {ECO:0000313|EMBL:AAK93441.1};
Name=dlp {ECO:0000313|EMBL:AAF49722.2,
ECO:0000313|FlyBase:FBgn0041604};
Synonyms=CG17703 {ECO:0000313|EMBL:AAF49722.2},
CG5031 {ECO:0000313|EMBL:AAF49722.2},
CT16138 {ECO:0000313|EMBL:AAF49722.2},
D-gpcB {ECO:0000313|EMBL:AAF49722.2},
Dally-like {ECO:0000313|EMBL:AAF49722.2},
DLP {ECO:0000313|EMBL:AAF49722.2}, Dlp {ECO:0000313|EMBL:AAF49722.2},
Dly {ECO:0000313|EMBL:AAF49722.2}, dly {ECO:0000313|EMBL:AAF49722.2},
Dmel\CG32146 {ECO:0000313|EMBL:AAF49722.2};
ORFNames=CG32146 {ECO:0000313|FlyBase:FBgn0041604},
Dmel_CG32146 {ECO:0000313|EMBL:AAF49722.2};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AAF49722.2, ECO:0000313|Proteomes:UP000000803};
[1] {ECO:0000313|EMBL:AAF49722.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AAK93441.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Berkeley {ECO:0000313|EMBL:AAK93441.1};
Frohberg C.;
Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|EMBL:AAF49722.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[4] {ECO:0000313|EMBL:AAF49722.2, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[5] {ECO:0000313|EMBL:AAF49722.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002).
[6] {ECO:0000313|EMBL:AAF49722.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[7] {ECO:0000313|EMBL:AAF49722.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[8] {ECO:0000313|EMBL:AAF49722.2}
NUCLEOTIDE SEQUENCE.
O'Boyle S.T.;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AAF49722.2}
NUCLEOTIDE SEQUENCE.
Berkeley Drosophila Genome Project;
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E.,
Yu C., Rubin G.;
"Drosophila melanogaster release 4 sequence.";
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
[10] {ECO:0000313|EMBL:AAF49722.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[11] {ECO:0000313|EMBL:AAF49722.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
[12] {ECO:0000213|PDB:3ODN}
X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS) OF 74-617, AND DISULFIDE BONDS.
PubMed=21828006; DOI=10.1073/pnas.1109877108;
Kim M.S., Saunders A.M., Hamaoka B.Y., Beachy P.A., Leahy D.J.;
"Structure of the protein core of the glypican Dally-like and
localization of a region important for hedgehog signaling.";
Proc. Natl. Acad. Sci. U.S.A. 108:13112-13117(2011).
[13] {ECO:0000313|EMBL:AAF49722.2}
NUCLEOTIDE SEQUENCE.
PubMed=26109357;
FlyBase Consortium;
Matthews B.B., Dos Santos G., Crosby M.A., Emmert D.B.,
St Pierre S.E., Gramates L.S., Zhou P., Schroeder A.J., Falls K.,
Strelets V., Russo S.M., Gelbart W.M.;
"Gene Model Annotations for Drosophila melanogaster: Impact of High-
Throughput Data.";
G3 (Bethesda) 5:1721-1736(2015).
[14] {ECO:0000313|EMBL:AAF49722.2}
NUCLEOTIDE SEQUENCE.
PubMed=26109356;
FlyBase Consortium;
Crosby M.A., Gramates L.S., Dos Santos G., Matthews B.B.,
St Pierre S.E., Zhou P., Schroeder A.J., Falls K., Emmert D.B.,
Russo S.M., Gelbart W.M.;
"Gene Model Annotations for Drosophila melanogaster: The Rule-
Benders.";
G3 (Bethesda) 5:1737-1749(2015).
[15] {ECO:0000313|EMBL:AAF49722.2}
NUCLEOTIDE SEQUENCE.
FlyBase;
Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Cell surface proteoglycan that bears heparan sulfate.
{ECO:0000256|RuleBase:RU003519}.
-!- SUBCELLULAR LOCATION: Cell membrane
{ECO:0000256|RuleBase:RU003519}; Lipid-anchor, GPI-anchor
{ECO:0000256|RuleBase:RU003519}.
-!- SIMILARITY: Belongs to the glypican family.
{ECO:0000256|RuleBase:RU003518}.
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EMBL; AE014296; AAF49722.2; -; Genomic_DNA.
EMBL; AY052017; AAK93441.1; -; mRNA.
RefSeq; NP_524071.2; NM_079347.3.
UniGene; Dm.2840; -.
PDB; 3ODN; X-ray; 2.40 A; A=74-617.
PDBsum; 3ODN; -.
IntAct; Q9VUG1; 19.
STRING; 7227.FBpp0075431; -.
EnsemblMetazoa; FBtr0075679; FBpp0075431; FBgn0041604.
GeneID; 39596; -.
KEGG; dme:Dmel_CG32146; -.
UCSC; CG32146-RA; d. melanogaster.
CTD; 39596; -.
FlyBase; FBgn0041604; dlp.
eggNOG; KOG3821; Eukaryota.
eggNOG; ENOG410XST2; LUCA.
GeneTree; ENSGT00550000074430; -.
KO; K08110; -.
OrthoDB; EOG091G06T6; -.
Reactome; R-DME-1971475; A tetrasaccharide linker sequence is required for GAG synthesis.
Reactome; R-DME-2022928; HS-GAG biosynthesis.
Reactome; R-DME-2024096; HS-GAG degradation.
Reactome; R-DME-376176; Signaling by ROBO receptors.
ChiTaRS; dlp; fly.
GenomeRNAi; 39596; -.
Proteomes; UP000000803; Chromosome 3L.
Bgee; FBgn0041604; Expressed in 66 organ(s), highest expression level in embryo.
GO; GO:0046658; C:anchored component of plasma membrane; IEA:InterPro.
GO; GO:0062023; C:collagen-containing extracellular matrix; IEA:InterPro.
GO; GO:0009897; C:external side of plasma membrane; IDA:FlyBase.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0031594; C:neuromuscular junction; IDA:FlyBase.
GO; GO:0098595; C:perivitelline space; HDA:FlyBase.
GO; GO:0005886; C:plasma membrane; HDA:FlyBase.
GO; GO:0045202; C:synapse; IDA:FlyBase.
GO; GO:0017147; F:Wnt-protein binding; IDA:FlyBase.
GO; GO:0007411; P:axon guidance; IMP:FlyBase.
GO; GO:0048749; P:compound eye development; IMP:FlyBase.
GO; GO:0050908; P:detection of light stimulus involved in visual perception; IMP:FlyBase.
GO; GO:0008587; P:imaginal disc-derived wing margin morphogenesis; IMP:FlyBase.
GO; GO:0007528; P:neuromuscular junction development; IMP:FlyBase.
GO; GO:0090263; P:positive regulation of canonical Wnt signaling pathway; IMP:FlyBase.
GO; GO:0045880; P:positive regulation of smoothened signaling pathway; IMP:FlyBase.
GO; GO:0030177; P:positive regulation of Wnt signaling pathway; IMP:FlyBase.
GO; GO:0045570; P:regulation of imaginal disc growth; IMP:FlyBase.
GO; GO:0008589; P:regulation of smoothened signaling pathway; IMP:FlyBase.
GO; GO:0007367; P:segment polarity determination; IMP:FlyBase.
GO; GO:0007224; P:smoothened signaling pathway; IMP:FlyBase.
GO; GO:0048190; P:wing disc dorsal/ventral pattern formation; IGI:FlyBase.
InterPro; IPR001863; Glypican.
PANTHER; PTHR10822; PTHR10822; 2.
Pfam; PF01153; Glypican; 2.
1: Evidence at protein level;
3D-structure {ECO:0000213|PDB:3ODN};
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Glycoprotein {ECO:0000256|RuleBase:RU003519};
GPI-anchor {ECO:0000256|RuleBase:RU003519};
Heparan sulfate {ECO:0000256|RuleBase:RU003519};
Lipoprotein {ECO:0000256|RuleBase:RU003519};
Membrane {ECO:0000256|RuleBase:RU003519, ECO:0000256|SAM:Phobius};
Proteoglycan {ECO:0000256|RuleBase:RU003519};
Proteomics identification {ECO:0000213|PeptideAtlas:Q9VUG1};
Reference proteome {ECO:0000313|Proteomes:UP000000803};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius}.
TRANSMEM 21 41 Helical. {ECO:0000256|SAM:Phobius}.
COILED 473 495 {ECO:0000256|SAM:Coils}.
DISULFID 241 392 {ECO:0000213|PDB:3ODN}.
DISULFID 296 328 {ECO:0000213|PDB:3ODN}.
DISULFID 317 553 {ECO:0000213|PDB:3ODN}.
DISULFID 321 538 {ECO:0000213|PDB:3ODN}.
SEQUENCE 765 AA; 85323 MW; 497851309B96D43F CRC64;
MLHQQQQQQH LHCRRKATAT TTARLVIFSS PLLLLLLTTH LPPTLQADNG PAPQVAALAA
PNPAGGVAGS SIIDQFSPNC SAVTHIFQAR GIDAIEIPQK PSNERVLRYC ESPSVGTCCT
YNMETRMAMQ SRQQLEGHTK DQISRMSGIL GSKATKFKDI FTALLKESRT QFNSMFIRTY
GVIYERNSYV FSDLFKELET YFANGRVDLL EVMDKFFNTL YQKMFTVLNT QYTFDENYMR
CVSEHMKELK PFGDVPDKLS VQIKRSFVAT RTYGQALTTA SEVAKKVLNV RLNADCTGAL
TKMQHCGACK GYTEKPCTNY CVNVIKGCLH YQHEFDSEWE NFAMAMDKVA ERLLGSFNIV
MVVEPLNIKI SEAIMNFQDS GQDITNRVFQ GCGRPKLKKM KRSISPKLQG VQILNARSPV
EADTLDIDET LDEAIVLRER RAAEPGSQET SAQQSQEQGV GKSGNGGGGG GGNNRRQQQR
RKQQQQRRKQ QNNRDDNDDD DNESGGGREP ILDRIVRDIR QRVKDYKKFW SNLPHSVCSN
EDIASSSDVD GMCWNGHTID RYMHSITTEH GSNPEFTGNP ASTKQTAQMA SQLSHLKNAI
VHLRNAYNGQ DVEWSEQEEL PYAGSGAGSG SGSEDDEDDD EGSGLGPFEP SHKPDVERPS
VDADNDDDED AGGRGHMPTH TSRPTSGVDD KNPLIHTTHF DQDHNDLDED HRQLDEDEDT
DAGHDGANDN RSSDAPEKMT LRRALVVYLL PLYMAWFGGV CADLL


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