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Dally-like, isoform C

 Q7KUL1_DROME            Unreviewed;       764 AA.
Q7KUL1;
05-JUL-2004, integrated into UniProtKB/TrEMBL.
26-JUN-2013, sequence version 2.
22-NOV-2017, entry version 120.
SubName: Full=Dally-like, isoform C {ECO:0000313|EMBL:AAS65005.2};
Name=dlp {ECO:0000313|EMBL:AAS65005.2,
ECO:0000313|FlyBase:FBgn0041604};
Synonyms=CG17703 {ECO:0000313|EMBL:AAS65005.2},
CG5031 {ECO:0000313|EMBL:AAS65005.2},
CT16138 {ECO:0000313|EMBL:AAS65005.2},
D-gpcB {ECO:0000313|EMBL:AAS65005.2},
Dally-like {ECO:0000313|EMBL:AAS65005.2},
DLP {ECO:0000313|EMBL:AAS65005.2}, Dlp {ECO:0000313|EMBL:AAS65005.2},
Dly {ECO:0000313|EMBL:AAS65005.2}, dly {ECO:0000313|EMBL:AAS65005.2},
Dmel\CG32146 {ECO:0000313|EMBL:AAS65005.2};
ORFNames=CG32146 {ECO:0000313|EMBL:AAS65005.2,
ECO:0000313|FlyBase:FBgn0041604},
Dmel_CG32146 {ECO:0000313|EMBL:AAS65005.2};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AAS65005.2, ECO:0000313|Proteomes:UP000000803};
[1] {ECO:0000313|EMBL:AAS65005.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AAS65005.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[3] {ECO:0000313|EMBL:AAS65005.2, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[4] {ECO:0000313|EMBL:AAS65005.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002).
[5] {ECO:0000313|EMBL:AAS65005.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[6] {ECO:0000313|EMBL:AAS65005.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[7] {ECO:0000313|EMBL:AAS65005.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[8] {ECO:0000313|EMBL:AAS65005.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
-!- FUNCTION: Cell surface proteoglycan that bears heparan sulfate.
{ECO:0000256|RuleBase:RU003519}.
-!- SUBCELLULAR LOCATION: Cell membrane
{ECO:0000256|RuleBase:RU003519}; Lipid-anchor, GPI-anchor
{ECO:0000256|RuleBase:RU003519}.
-!- SIMILARITY: Belongs to the glypican family.
{ECO:0000256|RuleBase:RU003518}.
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EMBL; AE014296; AAS65005.2; -; Genomic_DNA.
RefSeq; NP_996075.2; NM_206353.2.
UniGene; Dm.2840; -.
ProteinModelPortal; Q7KUL1; -.
SMR; Q7KUL1; -.
IntAct; Q7KUL1; 3.
PaxDb; Q7KUL1; -.
PRIDE; Q7KUL1; -.
EnsemblMetazoa; FBtr0333032; FBpp0305246; FBgn0041604.
GeneID; 39596; -.
UCSC; CG32146-RB; d. melanogaster.
CTD; 39596; -.
FlyBase; FBgn0041604; dlp.
eggNOG; KOG3821; Eukaryota.
eggNOG; ENOG410XST2; LUCA.
GeneTree; ENSGT00550000074430; -.
InParanoid; Q7KUL1; -.
OrthoDB; EOG091G06T6; -.
Reactome; R-DME-1971475; A tetrasaccharide linker sequence is required for GAG synthesis.
Reactome; R-DME-2022928; HS-GAG biosynthesis.
Reactome; R-DME-2024096; HS-GAG degradation.
Reactome; R-DME-376176; Signaling by ROBO receptors.
GenomeRNAi; 39596; -.
Proteomes; UP000000803; Chromosome 3L.
Bgee; FBgn0041604; -.
ExpressionAtlas; Q7KUL1; differential.
Genevisible; Q7KUL1; DM.
GO; GO:0031225; C:anchored component of membrane; IEA:UniProtKB-KW.
GO; GO:0009897; C:external side of plasma membrane; IDA:FlyBase.
GO; GO:0005576; C:extracellular region; ISS:FlyBase.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0031594; C:neuromuscular junction; IDA:FlyBase.
GO; GO:0098595; C:perivitelline space; IDA:FlyBase.
GO; GO:0005886; C:plasma membrane; IDA:FlyBase.
GO; GO:0005578; C:proteinaceous extracellular matrix; IEA:InterPro.
GO; GO:0045202; C:synapse; IDA:FlyBase.
GO; GO:0043395; F:heparan sulfate proteoglycan binding; IEA:InterPro.
GO; GO:0017147; F:Wnt-protein binding; IDA:FlyBase.
GO; GO:0007411; P:axon guidance; IMP:FlyBase.
GO; GO:0048749; P:compound eye development; IMP:FlyBase.
GO; GO:0050908; P:detection of light stimulus involved in visual perception; IMP:FlyBase.
GO; GO:0008587; P:imaginal disc-derived wing margin morphogenesis; IMP:FlyBase.
GO; GO:0030178; P:negative regulation of Wnt signaling pathway; IMP:FlyBase.
GO; GO:0007528; P:neuromuscular junction development; IMP:FlyBase.
GO; GO:0045880; P:positive regulation of smoothened signaling pathway; IMP:FlyBase.
GO; GO:0030177; P:positive regulation of Wnt signaling pathway; IMP:FlyBase.
GO; GO:0045570; P:regulation of imaginal disc growth; IMP:FlyBase.
GO; GO:0008589; P:regulation of smoothened signaling pathway; IMP:FlyBase.
GO; GO:0007367; P:segment polarity determination; IMP:FlyBase.
GO; GO:0007224; P:smoothened signaling pathway; IMP:FlyBase.
GO; GO:0048190; P:wing disc dorsal/ventral pattern formation; IGI:FlyBase.
GO; GO:0016055; P:Wnt signaling pathway; IMP:FlyBase.
Gene3D; 1.25.10.10; -; 1.
InterPro; IPR011989; ARM-like.
InterPro; IPR001863; Glypican.
PANTHER; PTHR10822; PTHR10822; 2.
Pfam; PF01153; Glypican; 2.
1: Evidence at protein level;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Glycoprotein {ECO:0000256|RuleBase:RU003519};
GPI-anchor {ECO:0000256|RuleBase:RU003519};
Heparan sulfate {ECO:0000256|RuleBase:RU003519};
Lipoprotein {ECO:0000256|RuleBase:RU003519};
Membrane {ECO:0000256|RuleBase:RU003519, ECO:0000256|SAM:Phobius};
Proteoglycan {ECO:0000256|RuleBase:RU003519};
Proteomics identification {ECO:0000213|PeptideAtlas:Q7KUL1};
Reference proteome {ECO:0000313|Proteomes:UP000000803};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius}.
TRANSMEM 21 41 Helical. {ECO:0000256|SAM:Phobius}.
COILED 473 495 {ECO:0000256|SAM:Coils}.
SEQUENCE 764 AA; 85194 MW; C5C6DF5A7189F8F2 CRC64;
MLHQQQQQQH LHCRRKATAT TTARLVIFSS PLLLLLLTTH LPPTLQADNG PAPQVAALAA
PNPAGGVAGS SIIDQFSPNC SAVTHIFQAR GIDAIEIPQK PSNERVLRYC ESPSVGTCCT
YNMETRMAMQ SRQQLEGHTK DQISRMSGIL GSKATKFKDI FTALLKESRT QFNSMFIRTY
GVIYERNSYV FSDLFKELET YFANGRVDLL EVMDKFFNTL YQKMFTVLNT QYTFDENYMR
CVSEHMKELK PFGDVPDKLS VQIKRSFVAT RTYGQALTTA SEVAKKVLNV RLNADCTGAL
TKMQHCGACK GYTEKPCTNY CVNVIKGCLH YQHEFDSEWE NFAMAMDKVA ERLLGSFNIV
MVVEPLNIKI SEAIMNFQDS GQDITNRVFQ GCGRPKLKKM KRSISPKLQG VQILNARSPV
EADTLDIDET LDEAIVLRER RAAEPGSQET SAQQSQEQGV GKSGNGGGGG GGNNRRQQQR
RKQQQQRRKQ QNNRDDNDDD DNESGGGREP ILDRIVRDIR QRVKDYKKFW SNLPHSVCSN
EDIASSSDVD GMCWNGHTID RYMHSITTEH GSNPEFTGNP ASTKQTAQMA SQLSHLKNAI
VHLRNAYNGQ DVEWSEQELP YAGSGAGSGS GSEDDEDDDE GSGLGPFEPS HKPDVERPSV
DADNDDDEDA GGRGHMPTHT SRPTSGVDDK NPLIHTTHFD QDHNDLDEDH RQLDEDEDTD
AGHDGANDNR SSDAPEKMTL RRALVVYLLP LYMAWFGGVC ADLL


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