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Drab5 (GH24702p) (Rab5) (Rab5 protein) (Rab5, isoform A) (Rab5, isoform B) (Rab5, isoform C) (Rab5, isoform E) (Rab5, isoform F) (Rab5, isoform H)

 Q9V3I2_DROME            Unreviewed;       219 AA.
Q9V3I2;
01-MAY-2000, integrated into UniProtKB/TrEMBL.
01-MAY-2000, sequence version 1.
22-NOV-2017, entry version 152.
SubName: Full=Drab5 {ECO:0000313|EMBL:BAA87879.1};
SubName: Full=GH24702p {ECO:0000313|EMBL:AAL25382.1};
SubName: Full=Rab5 {ECO:0000313|EMBL:AAN85552.1};
SubName: Full=Rab5 protein {ECO:0000313|EMBL:BAA88244.1};
SubName: Full=Rab5, isoform A {ECO:0000313|EMBL:AAF51265.1};
SubName: Full=Rab5, isoform B {ECO:0000313|EMBL:AAN10422.1};
SubName: Full=Rab5, isoform C {ECO:0000313|EMBL:AAN10423.1};
SubName: Full=Rab5, isoform E {ECO:0000313|EMBL:AAN10425.1};
SubName: Full=Rab5, isoform F {ECO:0000313|EMBL:AAN10426.1};
SubName: Full=Rab5, isoform H {ECO:0000313|EMBL:AGB92463.1};
Name=Rab5 {ECO:0000313|EMBL:AAF51265.1,
ECO:0000313|FlyBase:FBgn0014010};
Synonyms=AAF51265 {ECO:0000313|EMBL:AAF51265.1},
BAA88244 {ECO:0000313|EMBL:AAF51265.1},
Dm Rab5 {ECO:0000313|EMBL:AAF51265.1},
Dmel\CG3664 {ECO:0000313|EMBL:AAF51265.1},
DmRab5 {ECO:0000313|EMBL:AAF51265.1},
DRab5 {ECO:0000313|EMBL:AAF51265.1},
Drab5 {ECO:0000313|EMBL:AAF51265.1},
dRab5 {ECO:0000313|EMBL:AAF51265.1},
drab5 {ECO:0000313|EMBL:AAF51265.1},
l(2)k08232 {ECO:0000313|EMBL:AAF51265.1},
Rab {ECO:0000313|EMBL:AAF51265.1},
Rab-5 {ECO:0000313|EMBL:AAF51265.1},
RAB5 {ECO:0000313|EMBL:AAF51265.1},
rab5 {ECO:0000313|EMBL:AAF51265.1},
RAB5a {ECO:0000313|EMBL:AAF51265.1};
ORFNames=CG3664 {ECO:0000313|EMBL:AAN10422.1,
ECO:0000313|FlyBase:FBgn0014010},
Dmel_CG3664 {ECO:0000313|EMBL:AAF51265.1};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AAF51265.1, ECO:0000313|Proteomes:UP000000803};
[1] {ECO:0000313|EMBL:BAA87879.1}
NUCLEOTIDE SEQUENCE.
PubMed=9197407; DOI=10.1007/s004380050443;
Sasamura T., Kobayashi T., Kojima S., Qadota H., Ohya Y., Masai I.,
Hotta Y.;
"Molecular cloning and characterization of Drosophila genes encoding
small GTPases of the rab and rho families.";
Mol. Gen. Genet. 254:486-494(1997).
[2] {ECO:0000313|EMBL:BAA87879.1}
NUCLEOTIDE SEQUENCE.
Sasamura T.;
Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|EMBL:BAA88244.1}
NUCLEOTIDE SEQUENCE.
Ozaki K., Shimizu H., Satoh A.K.;
"Drosophila Rab5 protein (Rab5) mRNA.";
Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases.
[4] {ECO:0000313|EMBL:AAF51265.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[5] {ECO:0000313|EMBL:AAL25382.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Berkeley {ECO:0000313|EMBL:AAL25382.1};
Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J.,
Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R.,
Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J.,
Nunoo J., Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K.,
Yu C., Lewis S.E., Rubin G.M., Celniker S.;
Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases.
[6] {ECO:0000313|EMBL:AAF51265.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[7] {ECO:0000313|EMBL:AAF51265.1, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[8] {ECO:0000313|EMBL:AAF51265.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002).
[9] {ECO:0000313|EMBL:AAF51265.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[10] {ECO:0000313|EMBL:AAN85552.1}
NUCLEOTIDE SEQUENCE.
PubMed=12743108; DOI=10.1083/jcb.200211087;
Wucherpfennig T., Wilsch-Brauninger M., Gonzalez-Gaitan M.;
"Role of Drosophila Rab5 during endosomal trafficking at the synapse
and evoked neurotransmitter release.";
J. Cell Biol. 161:609-624(2003).
[11] {ECO:0000313|EMBL:AAF51265.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[12] {ECO:0000313|EMBL:AAF51265.1}
NUCLEOTIDE SEQUENCE.
Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S.,
Svirskas R., Rubin G.;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[13] {ECO:0000313|EMBL:AAF51265.1}
NUCLEOTIDE SEQUENCE.
Berkeley Drosophila Genome Project;
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E.,
Yu C., Rubin G.;
"Drosophila melanogaster release 4 sequence.";
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
[14] {ECO:0000313|EMBL:AAF51265.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[15] {ECO:0000313|EMBL:AAF51265.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
[16] {ECO:0000313|EMBL:AAF51265.1}
NUCLEOTIDE SEQUENCE.
FlyBase;
Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
-----------------------------------------------------------------------
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EMBL; AE014134; AAF51265.1; -; Genomic_DNA.
EMBL; AY060343; AAL25382.1; -; mRNA.
EMBL; AE014134; AAN10422.1; -; Genomic_DNA.
EMBL; AE014134; AAN10423.1; -; Genomic_DNA.
EMBL; AE014134; AAN10424.1; -; Genomic_DNA.
EMBL; AE014134; AAN10425.1; -; Genomic_DNA.
EMBL; AE014134; AAN10426.1; -; Genomic_DNA.
EMBL; AY081180; AAN85552.1; -; mRNA.
EMBL; AY081181; AAN85553.1; -; mRNA.
EMBL; AE014134; AGB92462.1; -; Genomic_DNA.
EMBL; AE014134; AGB92463.1; -; Genomic_DNA.
EMBL; AE014134; AGB92464.1; -; Genomic_DNA.
EMBL; AB035353; BAA87879.1; -; mRNA.
EMBL; AB035671; BAA88244.1; -; mRNA.
EMBL; BK000968; DAA01061.1; -; Genomic_DNA.
RefSeq; NP_001259925.1; NM_001272996.1.
RefSeq; NP_001259926.1; NM_001272997.1.
RefSeq; NP_001259927.1; NM_001272998.1.
RefSeq; NP_523457.1; NM_078733.4.
RefSeq; NP_722795.1; NM_164475.2.
RefSeq; NP_722796.1; NM_164476.2.
RefSeq; NP_722797.1; NM_164477.3.
RefSeq; NP_722798.1; NM_164478.2.
RefSeq; NP_722799.1; NM_164479.2.
UniGene; Dm.6724; -.
MINT; MINT-334912; -.
STRING; 7227.FBpp0077473; -.
EnsemblMetazoa; FBtr0077793; FBpp0077470; FBgn0014010.
EnsemblMetazoa; FBtr0077794; FBpp0077471; FBgn0014010.
EnsemblMetazoa; FBtr0077795; FBpp0077472; FBgn0014010.
EnsemblMetazoa; FBtr0077796; FBpp0077473; FBgn0014010.
EnsemblMetazoa; FBtr0077797; FBpp0077474; FBgn0014010.
EnsemblMetazoa; FBtr0077798; FBpp0077475; FBgn0014010.
EnsemblMetazoa; FBtr0330668; FBpp0303518; FBgn0014010.
EnsemblMetazoa; FBtr0330669; FBpp0303519; FBgn0014010.
EnsemblMetazoa; FBtr0330670; FBpp0303520; FBgn0014010.
GeneID; 33418; -.
KEGG; dme:Dmel_CG3664; -.
UCSC; CG3664-RA; d. melanogaster.
CTD; 33418; -.
FlyBase; FBgn0014010; Rab5.
eggNOG; KOG0092; Eukaryota.
eggNOG; ENOG410YCCP; LUCA.
GeneTree; ENSGT00760000119101; -.
KO; K07889; -.
OMA; QTTVKFE; -.
OrthoDB; EOG091G0HKN; -.
GenomeRNAi; 33418; -.
Proteomes; UP000000803; Chromosome 2L.
Bgee; FBgn0014010; -.
GO; GO:0005938; C:cell cortex; IDA:FlyBase.
GO; GO:0005769; C:early endosome; IDA:FlyBase.
GO; GO:0030139; C:endocytic vesicle; IBA:GO_Central.
GO; GO:0043025; C:neuronal cell body; IDA:FlyBase.
GO; GO:0005886; C:plasma membrane; IDA:FlyBase.
GO; GO:0098793; C:presynapse; IEA:GOC.
GO; GO:0045202; C:synapse; IDA:FlyBase.
GO; GO:0031982; C:vesicle; ISS:FlyBase.
GO; GO:0005525; F:GTP binding; IEA:InterPro.
GO; GO:0003924; F:GTPase activity; ISS:FlyBase.
GO; GO:0048675; P:axon extension; IMP:FlyBase.
GO; GO:0007409; P:axonogenesis; IMP:FlyBase.
GO; GO:0007298; P:border follicle cell migration; IMP:FlyBase.
GO; GO:0007349; P:cellularization; IMP:FlyBase.
GO; GO:0006325; P:chromatin organization; IMP:FlyBase.
GO; GO:0061883; P:clathrin-dependent endocytosis involved in vitellogenesis; IDA:FlyBase.
GO; GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.
GO; GO:0046664; P:dorsal closure, amnioserosa morphology change; IMP:FlyBase.
GO; GO:0006897; P:endocytosis; IMP:FlyBase.
GO; GO:0034058; P:endosomal vesicle fusion; IMP:FlyBase.
GO; GO:0032509; P:endosome transport via multivesicular body sorting pathway; IMP:FlyBase.
GO; GO:0060429; P:epithelium development; IMP:FlyBase.
GO; GO:0035088; P:establishment or maintenance of apical/basal cell polarity; IMP:FlyBase.
GO; GO:0016321; P:female meiosis chromosome segregation; IMP:FlyBase.
GO; GO:0007293; P:germarium-derived egg chamber formation; IMP:FlyBase.
GO; GO:0016348; P:imaginal disc-derived leg joint morphogenesis; IGI:FlyBase.
GO; GO:0048803; P:imaginal disc-derived male genitalia morphogenesis; IMP:FlyBase.
GO; GO:0000278; P:mitotic cell cycle; IMP:FlyBase.
GO; GO:0008285; P:negative regulation of cell proliferation; IMP:FlyBase.
GO; GO:0007220; P:Notch receptor processing; IMP:FlyBase.
GO; GO:0048477; P:oogenesis; IMP:FlyBase.
GO; GO:0048227; P:plasma membrane to endosome transport; IMP:FlyBase.
GO; GO:2000366; P:positive regulation of STAT protein import into nucleus; IMP:FlyBase.
GO; GO:0032482; P:Rab protein signal transduction; ISS:FlyBase.
GO; GO:0030100; P:regulation of endocytosis; IMP:FlyBase.
GO; GO:0010906; P:regulation of glucose metabolic process; IMP:FlyBase.
GO; GO:0050803; P:regulation of synapse structure or activity; IMP:FlyBase.
GO; GO:0048488; P:synaptic vesicle endocytosis; TAS:FlyBase.
GO; GO:0099532; P:synaptic vesicle endosomal processing; IMP:SynGO.
GO; GO:0016189; P:synaptic vesicle to endosome fusion; IMP:FlyBase.
GO; GO:0016192; P:vesicle-mediated transport; ISS:FlyBase.
GO; GO:0035220; P:wing disc development; IMP:FlyBase.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR005225; Small_GTP-bd_dom.
InterPro; IPR001806; Small_GTPase.
Pfam; PF00071; Ras; 1.
SUPFAM; SSF52540; SSF52540; 1.
TIGRFAMs; TIGR00231; small_GTP; 1.
1: Evidence at protein level;
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Proteomics identification {ECO:0000213|PeptideAtlas:Q9V3I2};
Reference proteome {ECO:0000313|Proteomes:UP000000803}.
SEQUENCE 219 AA; 23959 MW; BFA3A28955B7F15D CRC64;
MATTPRSGGA SGTGTAQRPN GTSQNKSCQF KLVLLGESAV GKSSLVLRFV KGQFHEYQES
TIGAAFLTQT ICIEDTVVKF EIWDTAGQER YHSLAPMYYR GAQAAIVVYD IQNQDSFQRA
KTWVKELHKQ ASPNIVIALA GNKADLSNIR VVEFDEAKQY AEENGLLFME TSAKTGMNVN
DIFLAIAKKL PKNDGANNQG TSIRPTGTET NRPTNNCCK


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