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Extracellular agarase (EC 3.2.1.81)

 AGAR_STRCO              Reviewed;         309 AA.
P07883;
01-AUG-1988, integrated into UniProtKB/Swiss-Prot.
01-JUL-1989, sequence version 2.
07-JUN-2017, entry version 119.
RecName: Full=Extracellular agarase;
EC=3.2.1.81;
Flags: Precursor;
Name=dagA; OrderedLocusNames=SCO3471; ORFNames=SCE65.07c;
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145).
Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae;
Streptomyces; Streptomyces albidoflavus group.
NCBI_TaxID=100226;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND PROTEIN SEQUENCE OF 31-61.
STRAIN=A3(2) / NRRL B-16638;
PubMed=17165236; DOI=10.1007/BF00329843;
Buttner M.J., Fearnley I.M., Bibb M.J.;
"The agarase gene (dagA) of Streptomyces coelicolor A3(2): nucleotide
sequence and transcriptional analysis.";
Mol. Gen. Genet. 209:101-109(1987).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC BAA-471 / A3(2) / M145;
PubMed=12000953; DOI=10.1038/417141a;
Bentley S.D., Chater K.F., Cerdeno-Tarraga A.-M., Challis G.L.,
Thomson N.R., James K.D., Harris D.E., Quail M.A., Kieser H.,
Harper D., Bateman A., Brown S., Chandra G., Chen C.W., Collins M.,
Cronin A., Fraser A., Goble A., Hidalgo J., Hornsby T., Howarth S.,
Huang C.-H., Kieser T., Larke L., Murphy L.D., Oliver K., O'Neil S.,
Rabbinowitsch E., Rajandream M.A., Rutherford K.M., Rutter S.,
Seeger K., Saunders D., Sharp S., Squares R., Squares S., Taylor K.,
Warren T., Wietzorrek A., Woodward J.R., Barrell B.G., Parkhill J.,
Hopwood D.A.;
"Complete genome sequence of the model actinomycete Streptomyces
coelicolor A3(2).";
Nature 417:141-147(2002).
-!- CATALYTIC ACTIVITY: Hydrolysis of (1->4)-beta-D-galactosidic
linkages in agarose, giving the tetramer as the predominant
product.
-!- SUBCELLULAR LOCATION: Secreted.
-!- PTM: Predicted to be exported by the Tat system. The position of
the signal peptide cleavage has been experimentally proven.
-!- SIMILARITY: Belongs to the glycosyl hydrolase 16 family.
{ECO:0000305}.
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EMBL; X05811; CAA29257.1; -; Genomic_DNA.
EMBL; AL939116; CAB61795.1; -; Genomic_DNA.
PIR; S07322; EUSMAG.
RefSeq; NP_627674.1; NC_003888.3.
RefSeq; WP_011029010.1; NC_003888.3.
ProteinModelPortal; P07883; -.
SMR; P07883; -.
STRING; 100226.SCO3471; -.
CAZy; GH16; Glycoside Hydrolase Family 16.
EnsemblBacteria; CAB61795; CAB61795; CAB61795.
GeneID; 1098908; -.
KEGG; sco:SCO3471; -.
PATRIC; fig|100226.15.peg.3531; -.
eggNOG; ENOG4108MQB; Bacteria.
eggNOG; ENOG410YZRZ; LUCA.
InParanoid; P07883; -.
KO; K01219; -.
OrthoDB; POG091H0F6I; -.
Proteomes; UP000001973; Chromosome.
GO; GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO; GO:0033916; F:beta-agarase activity; IEA:UniProtKB-EC.
GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
CDD; cd02178; GH16_beta_agarase; 1.
InterPro; IPR016287; Beta_agarase.
InterPro; IPR013320; ConA-like_dom.
InterPro; IPR000757; GH16.
InterPro; IPR008263; GH16_AS.
InterPro; IPR006311; TAT_signal.
InterPro; IPR019546; TAT_signal_bac_arc.
Pfam; PF00722; Glyco_hydro_16; 1.
Pfam; PF10518; TAT_signal; 1.
PIRSF; PIRSF001097; Agarase; 1.
SUPFAM; SSF49899; SSF49899; 1.
PROSITE; PS01034; GH16_1; 1.
PROSITE; PS51762; GH16_2; 1.
PROSITE; PS51318; TAT; 1.
1: Evidence at protein level;
Complete proteome; Direct protein sequencing; Glycosidase; Hydrolase;
Reference proteome; Secreted; Signal.
SIGNAL 1 30 Tat-type signal. {ECO:0000255|PROSITE-
ProRule:PRU00648,
ECO:0000269|PubMed:17165236}.
CHAIN 31 309 Extracellular agarase.
/FTId=PRO_0000011797.
DOMAIN 33 309 GH16. {ECO:0000255|PROSITE-
ProRule:PRU01098}.
ACT_SITE 155 155 Nucleophile. {ECO:0000255|PROSITE-
ProRule:PRU10064}.
ACT_SITE 160 160 Proton donor. {ECO:0000255|PROSITE-
ProRule:PRU10064}.
SEQUENCE 309 AA; 35164 MW; 18E479E642DB1A43 CRC64;
MVNRRDLIKW SAVALGAGAG LAGPAPAAHA ADLEWEQYPV PAAPGGNRSW QLLPSHSDDF
NYTGKPQTFR GRWLDQHKDG WSGPANSLYS ARHSWVADGN LIVEGRRAPD GRVYCGYVTS
RTPVEYPLYT EVLMRVSGLK LSSNFWLLSR DDVNEIDVIE CYGNESLHGK HMNTAYHIFQ
RNPFTELARS QKGYFADGSY GYNGETGQVF GDGAGQPLLR NGFHRYGVHW ISATEFDFYF
NGRLVRRLNR SNDLRDPRSR FFDQPMHLIL NTESHQWRVD RGIEPTDAEL ADPSINNIYY
RWVRTYQAV


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