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FI23915p1 (GluRIID) (Glutamate receptor IID) (Ionotropic glutamate receptor subunit IA)

 Q9TVI0_DROME            Unreviewed;       902 AA.
Q9TVI0; Q9I7I5;
01-MAY-2000, integrated into UniProtKB/TrEMBL.
01-MAY-2000, sequence version 1.
18-JUL-2018, entry version 156.
SubName: Full=FI23915p1 {ECO:0000313|EMBL:AGW52178.1};
SubName: Full=GluRIID {ECO:0000313|EMBL:AAV54100.1};
SubName: Full=Glutamate receptor IID {ECO:0000313|EMBL:AAG22164.2};
SubName: Full=Ionotropic glutamate receptor subunit IA {ECO:0000313|EMBL:CAB64942.1};
Name=GluRIID {ECO:0000313|EMBL:AAG22164.2,
ECO:0000313|FlyBase:FBgn0028422};
Synonyms=brec {ECO:0000313|EMBL:AAG22164.2},
CT13538 {ECO:0000313|EMBL:AAG22164.2},
DGluRIID {ECO:0000313|EMBL:AAG22164.2},
DKaiR-IA {ECO:0000313|EMBL:AAG22164.2},
Dmel\CG18039 {ECO:0000313|EMBL:AAG22164.2},
DmelGluRIID {ECO:0000313|EMBL:AAG22164.2},
GluR-IID {ECO:0000313|EMBL:AAG22164.2},
GluRIA {ECO:0000313|EMBL:AAG22164.2},
gluRIID {ECO:0000313|EMBL:AAG22164.2},
GluRIID-RA {ECO:0000313|EMBL:AGW52178.1},
Kai-RIA {ECO:0000313|EMBL:CAB64942.1},
KaiRIA {ECO:0000313|EMBL:AAG22164.2, ECO:0000313|FlyBase:FBgn0028422},
kaiRIA {ECO:0000313|EMBL:AAG22164.2};
ORFNames=CG18039 {ECO:0000313|EMBL:AAG22164.2,
ECO:0000313|FlyBase:FBgn0028422},
Dmel_CG18039 {ECO:0000313|EMBL:AAG22164.2};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:CAB64942.1};
[1] {ECO:0000313|EMBL:CAB64942.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Canton S {ECO:0000313|EMBL:CAB64941.1}, and
WT Berlin {ECO:0000313|EMBL:CAB64942.1};
Schmitt B.J.;
Submitted (DEC-1999) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|EMBL:AAG22164.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[3] {ECO:0000313|EMBL:CAB64942.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Canton S {ECO:0000313|EMBL:CAB64941.1}, and
WT Berlin {ECO:0000313|EMBL:CAB64942.1};
Voelkner M., Lenz-Boehme B., Fuchs S., Wismar J., Betz H., Schmitt B.;
"Novel glutamate receptor subunit genes of Drosophila melanogaster.";
Submitted (JAN-2000) to the EMBL/GenBank/DDBJ databases.
[4] {ECO:0000313|EMBL:AAG22164.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[5] {ECO:0000313|EMBL:AAG22164.2, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[6] {ECO:0000313|EMBL:AAG22164.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002).
[7] {ECO:0000313|EMBL:AAG22164.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[8] {ECO:0000313|EMBL:AAV54100.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Oregon R {ECO:0000313|EMBL:AAV54100.1}, and
Rucuca {ECO:0000313|EMBL:AAV54101.1};
Featherstone D., Sheng Q.;
Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AAV54100.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Oregon R {ECO:0000313|EMBL:AAV54100.1}, and
Rucuca {ECO:0000313|EMBL:AAV54101.1};
PubMed=15788777; DOI=10.1523/JNEUROSCI.4201-04.2005;
Featherstone D.E., Rushton E., Rohrbough J., Liebl F., Karr J.,
Sheng Q., Rodesch C.K., Broadie K.;
"An essential Drosophila glutamate receptor subunit that functions in
both central neuropil and neuromuscular junction.";
J. Neurosci. 25:3199-3208(2005).
[10] {ECO:0000313|EMBL:AAG22164.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[11] {ECO:0000313|EMBL:AAG22164.2}
NUCLEOTIDE SEQUENCE.
Berkeley Drosophila Genome Project;
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E.,
Yu C., Rubin G.;
"Drosophila melanogaster release 4 sequence.";
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[12] {ECO:0000313|EMBL:AAG22164.2}
NUCLEOTIDE SEQUENCE.
Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S.,
Svirskas R., Rubin G.;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[13] {ECO:0000313|EMBL:AAG22164.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[14] {ECO:0000313|EMBL:AAG22164.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
[15] {ECO:0000313|EMBL:AGW52178.1}
NUCLEOTIDE SEQUENCE.
Carlson J., Booth B., Frise E., Park S., Wan K., Yu C., Celniker S.;
Submitted (SEP-2013) to the EMBL/GenBank/DDBJ databases.
[16] {ECO:0000313|EMBL:AAG22164.2}
NUCLEOTIDE SEQUENCE.
FlyBase;
Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
-!- SUBCELLULAR LOCATION: Cell junction, synapse, postsynaptic cell
membrane {ECO:0000256|SAAS:SAAS00582638}.
-!- SIMILARITY: Belongs to the glutamate-gated ion channel (TC
1.A.10.1) family. {ECO:0000256|SAAS:SAAS00586618}.
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EMBL; AE014297; AAG22164.2; -; Genomic_DNA.
EMBL; AY768536; AAV54100.1; -; Genomic_DNA.
EMBL; AY768537; AAV54101.1; -; Genomic_DNA.
EMBL; BT150368; AGW52178.1; -; mRNA.
EMBL; AJ251888; CAB64941.1; -; mRNA.
EMBL; AJ251889; CAB64942.1; -; mRNA.
RefSeq; NP_651982.1; NM_143725.3.
UniGene; Dm.3353; -.
IntAct; Q9TVI0; 1.
STRING; 7227.FBpp0083346; -.
EnsemblMetazoa; FBtr0083938; FBpp0083346; FBgn0028422.
GeneID; 44483; -.
KEGG; dme:Dmel_CG18039; -.
UCSC; CG18039-RA; d. melanogaster.
CTD; 44483; -.
FlyBase; FBgn0028422; GluRIID.
eggNOG; KOG1054; Eukaryota.
eggNOG; ENOG410XPSH; LUCA.
GeneTree; ENSGT00910000143978; -.
KO; K05313; -.
OMA; EVPFCDA; -.
OrthoDB; EOG091G02LN; -.
Reactome; R-DME-451307; Activation of Na-permeable kainate receptors.
Reactome; R-DME-451308; Activation of Ca-permeable Kainate Receptor.
Reactome; R-DME-500657; Presynaptic function of Kainate receptors.
GenomeRNAi; 44483; -.
Proteomes; UP000000803; Chromosome 3R.
Bgee; FBgn0028422; -.
GO; GO:0030054; C:cell junction; IEA:UniProtKB-KW.
GO; GO:0005622; C:intracellular; IEA:GOC.
GO; GO:0008328; C:ionotropic glutamate receptor complex; IMP:FlyBase.
GO; GO:0097482; C:muscle cell postsynaptic specialization; IDA:FlyBase.
GO; GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-SubCell.
GO; GO:0005234; F:extracellularly glutamate-gated ion channel activity; IEA:InterPro.
GO; GO:0022849; F:glutamate-gated calcium ion channel activity; IDA:FlyBase.
GO; GO:0004970; F:ionotropic glutamate receptor activity; IMP:FlyBase.
GO; GO:0015277; F:kainate selective glutamate receptor activity; ISS:FlyBase.
GO; GO:0006816; P:calcium ion transport; IDA:FlyBase.
GO; GO:0007274; P:neuromuscular synaptic transmission; IMP:FlyBase.
GO; GO:0030510; P:regulation of BMP signaling pathway; IMP:FlyBase.
GO; GO:0043179; P:rhythmic excitation; IMP:FlyBase.
GO; GO:0035249; P:synaptic transmission, glutamatergic; IC:FlyBase.
InterPro; IPR001828; ANF_lig-bd_rcpt.
InterPro; IPR019594; Glu/Gly-bd.
InterPro; IPR001508; Iono_rcpt_met.
InterPro; IPR001320; Iontro_rcpt.
InterPro; IPR028082; Peripla_BP_I.
Pfam; PF01094; ANF_receptor; 1.
Pfam; PF00060; Lig_chan; 1.
Pfam; PF10613; Lig_chan-Glu_bd; 1.
PRINTS; PR00177; NMDARECEPTOR.
SMART; SM00918; Lig_chan-Glu_bd; 1.
SMART; SM00079; PBPe; 1.
SUPFAM; SSF53822; SSF53822; 1.
2: Evidence at transcript level;
Cell junction {ECO:0000256|SAAS:SAAS00111890};
Cell membrane {ECO:0000256|SAAS:SAAS00618203};
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Ion channel {ECO:0000256|SAAS:SAAS00586652};
Ion transport {ECO:0000256|SAAS:SAAS00586652};
Ligand-gated ion channel {ECO:0000256|SAAS:SAAS00586652};
Membrane {ECO:0000256|SAAS:SAAS00111890,
ECO:0000256|SAAS:SAAS00425515, ECO:0000256|SAAS:SAAS00618203,
ECO:0000256|SAM:Phobius};
Postsynaptic cell membrane {ECO:0000256|SAAS:SAAS00111890};
Receptor {ECO:0000256|SAAS:SAAS00586650, ECO:0000313|EMBL:CAB64942.1};
Reference proteome {ECO:0000313|Proteomes:UP000000803};
Signal {ECO:0000256|SAM:SignalP};
Synapse {ECO:0000256|SAAS:SAAS00111890};
Transmembrane {ECO:0000256|SAAS:SAAS00425515,
ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAAS:SAAS00425515,
ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|SAAS:SAAS00586652}.
SIGNAL 1 18 {ECO:0000256|SAM:SignalP}.
CHAIN 19 902 {ECO:0000256|SAM:SignalP}.
/FTId=PRO_5015300049.
TRANSMEM 550 568 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 625 648 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 815 839 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 419 789 PBPe. {ECO:0000259|SMART:SM00079}.
DOMAIN 430 494 Lig_chan-Glu_bd.
{ECO:0000259|SMART:SM00918}.
SEQUENCE 902 AA; 101657 MW; E025BE6BAD86CB8C CRC64;
MHFCWISLII LSLSRVQAQF YGGNAYEASS GQSIRLGLIT DDATDRIRQT FEHAISVVNN
ELGVPLVGET EQVAYGNSVQ AFAQLCRLMQ SGVGAVFGPA ARHTASHLLN ACDSKDIPFI
YPHLSWGSNP DGFNLHPSPE DIANALYDIV NQFEWSRFIF CYESAEYLKI LDHLMTRYGI
KGPVIKVMRY DLNLNGNYKS VLRRIRKSED SRIVVVGSTT GVAELLRQAQ QVGIMNEDYT
YIIGNLNLHT FDLEEYKYSE ANITGIRMFS PDQEEVRDLM EKLHQELGES EPVNSGSTFI
TMEMALTYDA VRVIAETTKH LPYQPQMLNC SERHDNVQPD GSTFRNYMRS LEIKEKTITG
RIYFEGNVRK GFTFDVIELQ TSGLVKVGTW EEGKDFEFQR PPQAVNFNDI DDGSLVNKTF
IVLISVATKP YASLVESIDT LIGNNQFQGY GVDLIKELAD KLGFNFTFRD GGNDYGSFNK
TTNSTSGMLK EIVEGRADLA ITDLTITSER EEVIDFSIPF MNLGIAILYV KPQKAPPALF
SFMDPFSSEV WLYLGIAYLG VSLCFFIIGR LSPIEWDNPY PCIEEPEELE NQFTINNSLW
FTTGALLQQG SEIAPKALST RTISAIWWFF TLIMVSSYTA NLAAFLTIEN PTSPINSVKD
LADNKDDVQY GAKRTGSTRN FFSTSEEPIY IKMNEYLNAH PEMLMENNQQ GVDKVKSGTK
YAFLMESTSI EFNTVRECNL TKVGDPLDEK GYGIAMVKNW PYRDKFNKAL LELQEQGVLA
RLKNKWWNEV GAGVCSAKSD DDGPSELGVD NLSGIYVVLV IGSIISIIIS ILCWCYFVYK
KAKNYEVPFC DALAEEFRIV IRFSENERPL KSAQSIYSRS RNSSQSIESL KTDSEENMPV
ED


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Genprice Inc, Invoices and accounting
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