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Fatty acid-binding protein, liver (Fatty acid-binding protein 1) (Liver basic FABP) (LB-FABP) (Liver bile acid-binding protein) (L-BABP) (Liver-type fatty acid-binding protein) (L-FABP)

 FABPL_CHICK             Reviewed;         126 AA.
P80226; Q90WB0;
01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
23-JAN-2007, sequence version 2.
10-MAY-2017, entry version 128.
RecName: Full=Fatty acid-binding protein, liver;
AltName: Full=Fatty acid-binding protein 1;
AltName: Full=Liver basic FABP;
Short=LB-FABP;
AltName: Full=Liver bile acid-binding protein;
Short=L-BABP;
AltName: Full=Liver-type fatty acid-binding protein;
Short=L-FABP;
Name=FABP1;
Gallus gallus (Chicken).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
Phasianidae; Phasianinae; Gallus.
NCBI_TaxID=9031;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=White leghorn; TISSUE=Liver;
Murai A., Kusumoto K., Okumura J.;
"Regulation of gene expression of two liver type fatty acid binding
proteins in chicken.";
Submitted (MAY-2001) to the EMBL/GenBank/DDBJ databases.
[2]
PROTEIN SEQUENCE OF 2-126, AND ACETYLATION AT ALA-2.
TISSUE=Liver;
PubMed=7553344; DOI=10.1016/0305-0491(94)90010-8;
Ceciliani F., Monaco H.L., Ronchi S., Faotto L., Spadon P.;
"The primary structure of a basic (pI 9.0) fatty acid-binding protein
from liver of Gallus domesticus.";
Comp. Biochem. Physiol. 109B:261-271(1994).
[3]
X-RAY CRYSTALLOGRAPHY (2.7 ANGSTROMS).
PubMed=2266974; DOI=10.1007/BF00231372;
Scapin G., Spadon P., Mammi M., Zanotti G., Monaco H.L.;
"Crystal structure of chicken liver basic fatty acid-binding protein
at 2.7 A resolution.";
Mol. Cell. Biochem. 98:95-99(1990).
[4]
STRUCTURE BY NMR.
PubMed=12652125; DOI=10.1023/A:1022277727303;
Vasile F., Ragona L., Catalano M., Zetta L., Perduca M., Monaco H.L.,
Molinari H.;
"Solution structure of chicken liver basic fatty acid binding
protein.";
J. Biomol. NMR 25:157-160(2003).
[5]
X-RAY CRYSTALLOGRAPHY (2.0 ANGSTROMS) IN COMPLEX WITH CHOLATE.
PubMed=15518556; DOI=10.1021/bi0489661;
Nichesola D., Perduca M., Capaldi S., Carrizo M.E., Righetti P.G.,
Monaco H.L.;
"Crystal structure of chicken liver basic fatty acid-binding protein
complexed with cholic acid.";
Biochemistry 43:14072-14079(2004).
[6]
STRUCTURE BY NMR.
PubMed=16439356; DOI=10.1074/jbc.M513003200;
Ragona L., Catalano M., Luppi M., Cicero D., Eliseo T., Foote J.,
Fogolari F., Zetta L., Molinari H.;
"NMR dynamic studies suggest that allosteric activation regulates
ligand binding in chicken liver bile acid-binding protein.";
J. Biol. Chem. 281:9697-9709(2006).
-!- FUNCTION: Binds free fatty acids and their coenzyme A derivatives,
bilirubin, and some other small molecules in the cytoplasm. May be
involved in intracellular lipid transport. Binds 2 molecules of
cholate per subunit.
-!- SUBCELLULAR LOCATION: Cytoplasm.
-!- DOMAIN: Forms a beta-barrel structure that accommodates
hydrophobic ligands in its interior.
-!- SIMILARITY: Belongs to the calycin superfamily. Fatty-acid binding
protein (FABP) family. {ECO:0000305}.
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EMBL; AF380998; AAK58094.1; -; mRNA.
RefSeq; NP_989965.1; NM_204634.1.
UniGene; Gga.40; -.
PDB; 1MVG; NMR; -; A=2-126.
PDB; 1TVQ; X-ray; 2.00 A; A=2-126.
PDB; 1TW4; X-ray; 2.00 A; A/B=2-126.
PDB; 1ZRY; NMR; -; A=2-126.
PDB; 2JN3; NMR; -; A=2-126.
PDB; 2K62; NMR; -; A=2-126.
PDB; 2LFO; NMR; -; A=2-126.
PDBsum; 1MVG; -.
PDBsum; 1TVQ; -.
PDBsum; 1TW4; -.
PDBsum; 1ZRY; -.
PDBsum; 2JN3; -.
PDBsum; 2K62; -.
PDBsum; 2LFO; -.
ProteinModelPortal; P80226; -.
SMR; P80226; -.
STRING; 9031.ENSGALP00000006574; -.
PaxDb; P80226; -.
GeneID; 395345; -.
KEGG; gga:395345; -.
CTD; 395345; -.
eggNOG; KOG4015; Eukaryota.
eggNOG; ENOG4111US8; LUCA.
HOGENOM; HOG000004830; -.
HOVERGEN; HBG005633; -.
InParanoid; P80226; -.
OrthoDB; EOG091G16BV; -.
PhylomeDB; P80226; -.
TreeFam; TF330348; -.
EvolutionaryTrace; P80226; -.
PRO; PR:P80226; -.
Proteomes; UP000000539; Unplaced.
Bgee; ENSGALG00000004141; -.
GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO; GO:0005504; F:fatty acid binding; IEA:InterPro.
GO; GO:0005215; F:transporter activity; IEA:InterPro.
Gene3D; 2.40.128.20; -; 1.
InterPro; IPR012674; Calycin.
InterPro; IPR000463; Fatty_acid-bd.
InterPro; IPR031259; ILBP.
InterPro; IPR031276; Lb-FABP.
PANTHER; PTHR11955; PTHR11955; 1.
PANTHER; PTHR11955:SF97; PTHR11955:SF97; 1.
PRINTS; PR00178; FATTYACIDBP.
SUPFAM; SSF50814; SSF50814; 1.
PROSITE; PS00214; FABP; 1.
1: Evidence at protein level;
3D-structure; Acetylation; Complete proteome; Cytoplasm;
Direct protein sequencing; Lipid-binding; Reference proteome;
Transport.
INIT_MET 1 1 Removed. {ECO:0000269|PubMed:7553344}.
CHAIN 2 126 Fatty acid-binding protein, liver.
/FTId=PRO_0000067338.
BINDING 56 56 Cholate 1. {ECO:0000269|PubMed:15518556}.
BINDING 57 57 Cholate 1. {ECO:0000269|PubMed:15518556}.
BINDING 77 77 Cholate 2. {ECO:0000269|PubMed:15518556}.
BINDING 99 99 Cholate 2. {ECO:0000269|PubMed:15518556}.
BINDING 101 101 Cholate 2. {ECO:0000269|PubMed:15518556}.
MOD_RES 2 2 N-acetylalanine.
{ECO:0000269|PubMed:7553344}.
CONFLICT 92 92 T -> C (in Ref. 1; AAK58094).
{ECO:0000305}.
STRAND 5 14 {ECO:0000244|PDB:1TVQ}.
HELIX 15 21 {ECO:0000244|PDB:1TVQ}.
STRAND 22 24 {ECO:0000244|PDB:1MVG}.
HELIX 26 32 {ECO:0000244|PDB:1TVQ}.
STRAND 38 44 {ECO:0000244|PDB:1TVQ}.
STRAND 47 53 {ECO:0000244|PDB:1TVQ}.
STRAND 58 64 {ECO:0000244|PDB:1TVQ}.
STRAND 69 72 {ECO:0000244|PDB:1TVQ}.
TURN 74 76 {ECO:0000244|PDB:1MVG}.
STRAND 78 81 {ECO:0000244|PDB:1TVQ}.
STRAND 84 86 {ECO:0000244|PDB:1TVQ}.
STRAND 89 94 {ECO:0000244|PDB:1TVQ}.
STRAND 97 104 {ECO:0000244|PDB:1TVQ}.
STRAND 107 114 {ECO:0000244|PDB:1TVQ}.
STRAND 117 125 {ECO:0000244|PDB:1TVQ}.
SEQUENCE 126 AA; 14210 MW; 537022389AC431FF CRC64;
MAFSGTWQVY AQENYEEFLK ALALPEDLIK MARDIKPIVE IQQKGDDFVV TSKTPRQTVT
NSFTLGKEAD ITTMDGKKLK CTVHLANGKL VTKSEKFSHE QEVKGNEMVE TITFGGVTLI
RRSKRV


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