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Fibrocystin-L (Polycystic kidney and hepatic disease 1-like protein 1) (PKHD1-like protein 1) (Protein D86)

 PKHL1_MOUSE             Reviewed;        4249 AA.
Q80ZA4; Q99PS9;
05-FEB-2008, integrated into UniProtKB/Swiss-Prot.
01-JUN-2003, sequence version 1.
28-FEB-2018, entry version 97.
RecName: Full=Fibrocystin-L;
AltName: Full=Polycystic kidney and hepatic disease 1-like protein 1;
Short=PKHD1-like protein 1;
AltName: Full=Protein D86;
Flags: Precursor;
Name=Pkhd1l1;
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
STRAIN=C57BL/6J;
PubMed=12620974; DOI=10.1093/hmg/ddg068;
Hogan M.C., Griffin M.D., Rossetti S., Torres V.E., Ward C.J.,
Harris P.C.;
"PKHDL1, a homolog of the autosomal recessive polycystic kidney
disease gene, encodes a receptor with inducible T lymphocyte
expression.";
Hum. Mol. Genet. 12:685-698(2003).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2).
TISSUE=Lymphocyte;
Sato H., Taniguchi M.;
"Novel protein secreted from lymphocytes.";
Submitted (FEB-2001) to the EMBL/GenBank/DDBJ databases.
[3]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Spleen;
PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
"A tissue-specific atlas of mouse protein phosphorylation and
expression.";
Cell 143:1174-1189(2010).
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000305}; Single-pass membrane
protein {ECO:0000305}.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=2;
Name=1;
IsoId=Q80ZA4-1; Sequence=Displayed;
Name=2;
IsoId=Q80ZA4-2; Sequence=VSP_031226, VSP_031227;
Note=No experimental confirmation available.;
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EMBL; AY219182; AAO60073.1; -; mRNA.
EMBL; AB055648; BAB32449.1; -; mRNA.
CCDS; CCDS84169.1; -. [Q80ZA4-1]
RefSeq; NP_619615.2; NM_138674.2. [Q80ZA4-1]
UniGene; Mm.211494; -.
ProteinModelPortal; Q80ZA4; -.
SMR; Q80ZA4; -.
iPTMnet; Q80ZA4; -.
PhosphoSitePlus; Q80ZA4; -.
EPD; Q80ZA4; -.
PaxDb; Q80ZA4; -.
PRIDE; Q80ZA4; -.
Ensembl; ENSMUST00000209244; ENSMUSP00000147447; ENSMUSG00000038725. [Q80ZA4-1]
GeneID; 192190; -.
KEGG; mmu:192190; -.
UCSC; uc007vpx.1; mouse. [Q80ZA4-2]
UCSC; uc007vpy.1; mouse. [Q80ZA4-1]
CTD; 93035; -.
MGI; MGI:2183153; Pkhd1l1.
eggNOG; ENOG410IEIF; Eukaryota.
eggNOG; ENOG410XQ01; LUCA.
GeneTree; ENSGT00780000121902; -.
HOGENOM; HOG000010311; -.
HOVERGEN; HBG099795; -.
InParanoid; Q80ZA4; -.
OMA; GRSGICW; -.
PhylomeDB; Q80ZA4; -.
PRO; PR:Q80ZA4; -.
Proteomes; UP000000589; Chromosome 15.
CleanEx; MM_PKHD1L1; -.
ExpressionAtlas; Q80ZA4; baseline and differential.
GO; GO:0005929; C:cilium; IDA:MGI.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
Gene3D; 2.160.20.10; -; 1.
Gene3D; 2.60.40.10; -; 14.
Gene3D; 2.60.40.420; -; 1.
InterPro; IPR008972; Cupredoxin.
InterPro; IPR019316; G8_domain.
InterPro; IPR013783; Ig-like_fold.
InterPro; IPR014756; Ig_E-set.
InterPro; IPR002909; IPT_dom.
InterPro; IPR037524; PA14/GLEYA.
InterPro; IPR011658; PA14_dom.
InterPro; IPR006626; PbH1.
InterPro; IPR012334; Pectin_lyas_fold.
InterPro; IPR011050; Pectin_lyase_fold/virulence.
InterPro; IPR029927; PKHDL1.
PANTHER; PTHR44854; PTHR44854; 1.
Pfam; PF10162; G8; 2.
Pfam; PF07691; PA14; 1.
Pfam; PF01833; TIG; 14.
SMART; SM01225; G8; 2.
SMART; SM00429; IPT; 10.
SMART; SM00758; PA14; 1.
SMART; SM00710; PbH1; 12.
SUPFAM; SSF49503; SSF49503; 1.
SUPFAM; SSF51126; SSF51126; 2.
SUPFAM; SSF81296; SSF81296; 14.
PROSITE; PS51484; G8; 2.
PROSITE; PS51820; PA14; 1.
1: Evidence at protein level;
Alternative splicing; Complete proteome; Glycoprotein; Membrane;
Reference proteome; Repeat; Signal; Transmembrane;
Transmembrane helix.
SIGNAL 1 20 {ECO:0000255}.
CHAIN 21 4249 Fibrocystin-L.
/FTId=PRO_0000318573.
TOPO_DOM 21 4222 Extracellular. {ECO:0000255}.
TRANSMEM 4223 4243 Helical. {ECO:0000255}.
TOPO_DOM 4244 4249 Cytoplasmic. {ECO:0000255}.
DOMAIN 31 132 IPT/TIG 1.
DOMAIN 146 255 IPT/TIG 2.
DOMAIN 270 361 IPT/TIG 3.
DOMAIN 337 492 PA14. {ECO:0000255|PROSITE-
ProRule:PRU01164}.
DOMAIN 1067 1153 IPT/TIG 4.
DOMAIN 1155 1234 IPT/TIG 5.
DOMAIN 1240 1323 IPT/TIG 6.
DOMAIN 1329 1468 IPT/TIG 7.
DOMAIN 1565 1648 IPT/TIG 8.
DOMAIN 1658 1742 IPT/TIG 9.
DOMAIN 1748 1827 IPT/TIG 10.
DOMAIN 1830 1909 IPT/TIG 11.
DOMAIN 1915 1996 IPT/TIG 12.
DOMAIN 1998 2084 IPT/TIG 13.
DOMAIN 2090 2175 IPT/TIG 14.
DOMAIN 2183 2303 G8 1. {ECO:0000255|PROSITE-
ProRule:PRU00817}.
REPEAT 2484 2506 PbH1 1.
REPEAT 2507 2529 PbH1 2.
REPEAT 2565 2587 PbH1 3.
REPEAT 2664 2686 PbH1 4.
REPEAT 2732 2755 PbH1 5.
DOMAIN 3035 3173 G8 2. {ECO:0000255|PROSITE-
ProRule:PRU00817}.
REPEAT 3292 3314 PbH1 6.
REPEAT 3354 3376 PbH1 7.
REPEAT 3415 3437 PbH1 8.
REPEAT 3470 3492 PbH1 9.
REPEAT 3493 3514 PbH1 10.
COMPBIAS 4178 4210 Ser-rich.
CARBOHYD 1297 1297 O-linked (GalNAc...) threonine.
{ECO:0000255}.
CARBOHYD 1359 1359 O-linked (GalNAc...) threonine.
{ECO:0000255}.
CARBOHYD 1838 1838 O-linked (GalNAc...) threonine.
{ECO:0000255}.
CARBOHYD 3735 3735 O-linked (GalNAc...) threonine.
{ECO:0000255}.
VAR_SEQ 1926 1944 LPGTEVEITGSNLGFAISD -> TPASTCLFIYCIDVMLQL
Y (in isoform 2). {ECO:0000303|Ref.2}.
/FTId=VSP_031226.
VAR_SEQ 1945 4249 Missing (in isoform 2).
{ECO:0000303|Ref.2}.
/FTId=VSP_031227.
SEQUENCE 4249 AA; 464732 MW; 797F6AE92407B148 CRC64;
MGHLWLSGTW FLFGLLWCAA DSHKGSSETI PKVTEVIPKY GSINGATRLT IKGEGFSQAS
QFNYGADNTE LGNHVQLVSS FQSITCDVEK DSSHSTQITC YTRAMPEDTY SVRVSVDGVP
VAENNTCKGV ASSWACSFST KSFRTPTIRS ITPLSGTPGT LITIKGRLFT DVYGSNTALS
SNGRNVRILR IYIGGMPCEL LIPHSDDLYG LKLDHANGDT GSVTCKTTGT YIGHHNVSFI
LDSDYGRSFP EKMTYFVSSL NKISMFQTYP EVVMVSPSKG STEGGTLLTI HGHFFDQTDL
PVRVLVGGQA CAILNVTENT IYCKTPPKPH ILKATYPGGR GLKVEVWNNS RPAHLEDILE
YNEHTPGYMG ATWTDSASYV WPIEQDTFVA RISGFLVPPD SDVYRFYIRG DDRYAIYFSQ
TGRTEDKVRI AYYSGNANTY FSNSTQRSDE IHLQKGKEYY IEILLQEYTL SAFVDVGLYQ
YKNVFTEQQT GDALNEEQVI KSQSTVVPEV QIITLENWET ADVTNEVQQV TVTSPCVGAN
SCSLSQYRFI YNMEKTVWLP ADASDFTLKS ALNDLWSIKP DSVQVTSKRD LQSYIYTITF
VSTRGDFDLL GYEVFEGSNV TLSITEQTKG KPNLETFTLN WDGIASKPLT PESSEAEFQV
AVEEMVSAKC PPEIAHLEEG FLVKYFRDYE TDFELEHINR GQKTAETDAY CGRYSLKNPA
VLFDSTDVKP NKSPYGDILL FPYNQLCLAY KGSLANFIDL KFKYQDSGKI IRSADVQFEY
NFASGNKWTY TCIDLLDFLQ TKYAGTSFSL QRITLQKSSE FQSIYVDAVY IGQTPTVSVL
DDMPKRRPPA LANKGIFLKH FQVNRTKLNG SAMTIQYSVT ITSYNCSHNI PMMAVSFGQI
ITNETKNELV YRGNNWPGES KIRIQKIQEA SPPISGSFDV QAYGHTLKGI PAAVPAADLQ
FALQSLEEIE QVSVNREGTC AGYSWSIRWT SPRGKQPLLQ INDSNIIGEK ANVTVTTIKE
GGLFRQRIPG DMLRTLNQQP QVEVYVNGIP AKCSGDCGFT WDAMITPLIL TTTPSEGSYA
ESTILTIAGS GFSPTSAVSV SVGSTRCSLL SVEENEIKCQ ILNGSAGHVP VAVSIADVGL
AQNLEGEGSH FIYRSQISHV WPDSGSLAGG TLLTISGFGF SENSTVLVGN ETCNVIEGDL
NRITCRTSKR IEGTVDISVI TNGIQVTAKD SFSYSCLQTP VVTDFSPKER TVLGKVNLTI
KGYNFGNELA QNTVYVGRKH CQVLHSNFTD ITCLLPTLPP GKHDIYVKVR NWGLASTRNK
LNASILYILE VIHMFPQRGS LYGGTEITIM GFGFSTIPTE NSVLLGSFPC DITSSSENVI
KCTLHSTGTV FRITNNGSHL VHGLGYAWSP SVLNVTVGDT VVWSWQAHPF LRGIGYRIFS
VSSPGSVTYD DKGFTNGRQK SASGSFSYQF TSPGIYYYSS GYVDEAHSIS LQGVINVFPA
EARHIPLYLF VGNIEATYVP AGPAHLQLAS TAAGCLATEP LCGLNDTRVK HSNKLFFELS
NCISPSIINI TPSTGTANEL ITIIGHGFSS LPCANKVTIG SYPCVVEESS ENSIICHIDP
QNSMNVGIRE IVTLIVYNLG TAINTLTKAF DRRFVLLPNI DMVMPKAGST TGMTRVTIQG
SGFMSSPEGV EVFMGDFPCK VLSVTYTAIE CETSPAPQQL VLVDILIHGV PAQCQSNCSF
SYLENIAPYV TGIFPNSIQG YGNVLIKGER FGTVLEEISI FIGSQQFRVI DVNENNITVL
MTPLEAGLHS LSVVVGSKGL ALGNLTISSP AVASVSPTSG SIAGGTTLMI TGNGFSPGNT
TVTVGDQPCQ ITFISSSEVY CSTPAGRAGT ANLKISVNAI IYPPLSFTYA MEDTPFLKRI
IPNRGLPGTE VEITGSNLGF AISDVSVMIK ESVCNVTTVN DTVLQCTVGE HAGGIFPVTM
LHKTKGSAVS SVAFEYPLSI QNIYPTQGSF GGGQTLTVTG MGFDPWNSTI LVCNSECAVD
KLRSNSTTLF CVIPPNNGKG HDQVCGVSVV NGKDSSHSTK LFTYTLSLTP LITEISPRRG
STAGGTRLTV TGSGFSENTQ GVQVFVGNSK CDIQYSNKTH IVCMTSVHVP SGWVPVHVNI
KNIGLAKLEN ADFLYADVWS ANSSWGGSPP PEEGSLAVIT KGQIILLDQS TPILKMLLIQ
GGTLIFDEAN IELQAENILI TDGGVLQIGT EASPFQHRAV ITLHGHLRSP ELPVYGAKTL
GVREGTLDLH GLPIPVVWTR LTHTANAGEW TLTVQEAVTW KAGDNIVIAS TGHRHSQAEN
EKRTIASVSA DGMHITLTKP LNYTHLGITT TLPDGTVFEA RAEVGILTRN ILIRGSDNVE
WNDKIPSCPD GFDTGEFATQ TCLQGKFGEE MGSDQFGGCI MLHAPLPGAD MVTGRIEYVE
VFHAGQSFRL GRYPIHWHLL GDLQFKSYVK GCAIHQSYNR AITIHNTHHL LVERNIIYDI
KGGAFFIEDG IEHGNILQYN LAVFVQQSTS LLNDDVTPAA FWVTNPNNTI RHNAAAGGTH
FGFWYRMNDH PDGPSFDRNI CQKRIPLGEF FNNTVHSQGW FGLWIFEEYF PMQTGSCTST
VPVPAIFNSL TVWNCQKGAE WVNGGALQFH NFVMVNNNEA GIETKRILAP YVGGWGESNG
AVIKNAKIVG HLDELGMGPT FCTSKGLVLP FSQGLTVSSV HFMNFDRHAC VALGVTSITG
VCNDRCGGWS AKFVGIRYFH APNKGGFRWE HEAVLIDVDG SLTGHRGHTV VPHSSLLDPS
HCTQEPAWSI GFPGSICDAS VSFHRLAFNK PSPVSLLEKD VVLSDSFGTS IVPFQKKRLT
HMSGWMALIP NANHINWYFK GVEHLTNISY TSTFYGFKEE DYVIISHNFT QNPDMFNVVD
MRNGSANPLN WNSSKNGDWH LEANTSTLYY LVSGRSDLPQ SQPISGTLDP GVKDVIINFQ
AYCCVLQDCF PVHPPSRKPI PRKRPAAYNL WSNESFWQSS PENNYTVPRP GANVIIPEGT
WIVADVDIPP VERLIIWGVL EMEDKSEIGV AGPTYRRVVL NATYISVQGG RLIGGWEDNP
FKGELQIVLR GNHSTPEWAF PDGPNQGAKV LGVFGELDLH GLPHSVYKTK LLETAEAGSK
ILSLVDAVDW QEGEDVVITT TSYDLHQTEI RRIAKILHGH KILILNDSLS YTHLAERQWI
SGTAQSYTLS ADVGILSRNI KIVGDDYSVL SKDSFGARIL VGSFTGNMMT FKGNARISNV
EFHHSGQEGY RDSTDPRYAV TFLNLGQIQD HGLSYVRGCA FHHVFSPAIG VFGTDGVDID
DNIIYFTVGE GIRIWGDANR VRGNLVTLSV WPGTYQNRKD LSSTLWHAAI EINRGTNTVL
QNNVVAGFGR VGYRIDGEPC SSQANSMENW FNNEAHGGLY GIYMNQDGLP GCSLIQGFTI
WTCWDYGIYF QTTESVHIYN VTLVNNGMSI FSMVYMPPSV SHKISSKTVK IKNSLIVGSS
PEFNCSDVLT NDSPDVELTS AHRSSRPPSG GRSGICWPTF ASAHNMAPRK PHAGIMSYNA
ISGLLHVSDS TFVGFKDVCS GETNVIFITN PLNEDLQHPI HVKNVQLIDT IEQSKVFIHR
PDISKVNPSD CVDMVCDAKR KSFLRDLDGS FLGNSGSVIP QAEYEWDGNS QLGIGDYRIP
KAMLTYLNGS RIPVTEKAPH KGIIRDATCK YIPEWQSYQC SGMEYAMMVL ESLDSDTETR
RLSPVAIMSN GYVDLINGPQ DHGWCAGYTC QRRLSLFHGI VALNKKYEVY FTGTSPQNLR
LMLLNVEHNK AVLVGIFFST LQRLDVYVNN SLVCPKNTAW NAQKKHCELE RHLSTEQFLP
NLGSTVPGEN YFDRTYQMLY LFLKGTTPVE VHTATVIFVS FHLPVMTADE FFSSHNLVRN
LALFLKIPSD KIRVSRIIGA SLRKKRSTGH IMEFEIGAAP TQFLSNSTTG QMQLSELQEI
TDSLGQAVVL GKISTILGFN ISSMSITSPI PQPTDSGWIK VTAQPVERSA FPVHYLALVS
SLSVVAQPVA AQPGQPFPQQ PSVKAVDPEG NCVSVGITSL TLKAILKDSN NNQVGGLSGN
TTIPFSTCWA NYTDLTPHRT GKNYKIEFVL DNTVRVDSRP FSLSAQSVPG GSGSSPGSGS
SSSGHSKASS VGTPVQTLAV ITACLVGRLL LLEVFMAAVF ILNTTVGIN


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