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Fusion glycoprotein F0

 B7SFW7_9MONO            Unreviewed;       553 AA.
B7SFW7;
10-FEB-2009, integrated into UniProtKB/TrEMBL.
10-FEB-2009, sequence version 1.
07-JUN-2017, entry version 59.
RecName: Full=Fusion glycoprotein F0 {ECO:0000256|RuleBase:RU003705, ECO:0000256|SAAS:SAAS00628579};
Name=F {ECO:0000313|EMBL:AGH08369.1};
Avian avulavirus 1.
Viruses; ssRNA viruses; ssRNA negative-strand viruses;
Mononegavirales; Paramyxoviridae; Avulavirus.
NCBI_TaxID=11176 {ECO:0000313|EMBL:ABZ80395.1, ECO:0000313|Proteomes:UP000140431};
[1] {ECO:0000313|EMBL:ABZ80395.1, ECO:0000313|Proteomes:UP000140431}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=VG/GA {ECO:0000313|EMBL:ABZ80395.1};
Perozo F., Villegas P., Afonso C.L.;
"Genetic analysis of clone 5.";
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|EMBL:AEZ00926.1}
NUCLEOTIDE SEQUENCE.
STRAIN=B1 {ECO:0000313|EMBL:AEZ00926.1}, and
Hitchner {ECO:0000313|EMBL:AEZ00928.1};
PubMed=22856199; DOI=10.1637/10035-120811-Reg.1;
Hines N.L., Killian M.L., Pedersen J.C., Reising M.M., Mosos N.A.,
Mathieu-Benson C., Miller C.L.;
"An rRT-PCR assay to detect the matrix gene of a broad range of avian
paramyxovirus serotype-1 strains.";
Avian Dis. 56:387-395(2012).
[3] {ECO:0000313|EMBL:AGH08369.1}
NUCLEOTIDE SEQUENCE.
STRAIN=APMV1/broiler/PA/USA/0813/2008 {ECO:0000313|EMBL:AGH08433.1},
APMV1/Broiler/USA/0001/2000 {ECO:0000313|EMBL:AGH08372.1},
APMV1/chicken/PA/USA/0814/2008 {ECO:0000313|EMBL:AGH08434.1},
APMV1/Chicken/USA/0107/2001 {ECO:0000313|EMBL:AGH08379.1},
APMV1/Pigeon/MN/USA/0713.2/2007 {ECO:0000313|EMBL:AGH08406.1},
APMV1/USA/9601/1996 {ECO:0000313|EMBL:AGH08369.1}, and
APMV1/USA/97BE/1997 {ECO:0000313|EMBL:AGH08371.1};
Poss M., Chong Y.L.;
"The molecular evolution of Paramyxovirus serotype 1 (PMV1) in North
America.";
Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases.
[4] {ECO:0000313|EMBL:CCX28745.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Chicken/Cameroon/CAE08-061/2009 {ECO:0000313|EMBL:CCX28745.1},
Chicken/Cameroon/CAE08-078/2009 {ECO:0000313|EMBL:CCX28746.1}, and
Chicken/Cameroon/CAE11-868/2011 {ECO:0000313|EMBL:CCX28782.1};
PubMed=23658271; DOI=10.1128/JCM.00684-13;
Snoeck C.J., Owoade A.A., Couacy-Hymann E., Alkali B.R., Okwen M.P.,
Adeyanju A.T., Komoyo G.F., Nakoune E., Le Faou A., Muller C.P.;
"High Genetic Diversity of Newcastle Disease Virus in Poultry in West
and Central Africa: Cocirculation of Genotype XIV and Newly Defined
Genotypes XVII and XVIII.";
J. Clin. Microbiol. 51:2250-2260(2013).
[5] {ECO:0000313|EMBL:CCX28745.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Chicken/Cameroon/CAE08-061/2009 {ECO:0000313|EMBL:CCX28745.1},
Chicken/Cameroon/CAE08-078/2009 {ECO:0000313|EMBL:CCX28746.1}, and
Chicken/Cameroon/CAE11-868/2011 {ECO:0000313|EMBL:CCX28782.1};
Snoeck C.;
Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
[6] {ECO:0000313|EMBL:AIC84183.1, ECO:0000313|Proteomes:UP000106573, ECO:0000313|Proteomes:UP000115710}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Go/CH/LFJ/1/06 {ECO:0000313|EMBL:AIC84189.1}, and
Go/CH/LHLJ/2/06 {ECO:0000313|EMBL:AIC84183.1};
Zhao S., Liu H., Han Z., Shao Y., Xu Y., Liu S.;
Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
[7] {ECO:0000313|EMBL:AIQ78374.1, ECO:0000313|Proteomes:UP000144070}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Ndv64/VH {ECO:0000313|EMBL:AIQ78374.1};
Jakhesara S.J., Patel H.S., Jhala M.K., Prajapati K.S., Joshi C.G.;
"Molecular and phylogenetic characterization of velogenic Newcastle
disease virus isolates in India reveals presence of II, IV and XIII
genotypes.";
Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
[8] {ECO:0000313|EMBL:ANA50356.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Rock pigeon/USA/GA/1/2012 {ECO:0000313|EMBL:ANA50356.1},
Rock pigeon/USA/GA/2/2012 {ECO:0000313|EMBL:ANA50357.1},
Rock pigeon/USA/GA/3/2012 {ECO:0000313|EMBL:ANA50358.1},
Rock pigeon/USA/GA/4/2012 {ECO:0000313|EMBL:ANA50359.1},
Rock pigeon/USA/GA/5/2012 {ECO:0000313|EMBL:ANA50360.1},
Rock pigeon/USA/GA/6/2012 {ECO:0000313|EMBL:ANA50361.1},
Rock pigeon/USA/GA/7/2012 {ECO:0000313|EMBL:ANA50362.1}, and
Rock pigeon/USA/GA/8/2012 {ECO:0000313|EMBL:ANA50363.1};
Ayala A.J., Dimitrov K.M., Olivier T.L., Becker C.R., Miller P.J.,
Afonso C.L.;
"Globalized Newcastle Disease Vaccine Escape Into Wild Birds.";
Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
-!- SUBUNIT: Homotrimer of disulfide-linked F1-F2.
{ECO:0000256|RuleBase:RU003705}.
-!- SUBCELLULAR LOCATION: Host cell membrane
{ECO:0000256|SAAS:SAAS00628583}; Single-pass membrane protein
{ECO:0000256|SAAS:SAAS00628583}.
-!- SUBCELLULAR LOCATION: Virion membrane
{ECO:0000256|RuleBase:RU003705}; Single-pass type I membrane
protein {ECO:0000256|RuleBase:RU003705}. Host cell membrane
{ECO:0000256|RuleBase:RU003705}; Single-pass membrane protein
{ECO:0000256|RuleBase:RU003705}.
-!- SIMILARITY: Belongs to the paramyxoviruses fusion glycoprotein
family. {ECO:0000256|RuleBase:RU003705,
ECO:0000256|SAAS:SAAS00628586}.
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EMBL; EU289029; ABZ80395.1; -; Viral_cRNA.
EMBL; JN872150; AEZ00926.1; -; Viral_cRNA.
EMBL; JN872151; AEZ00928.1; -; Viral_cRNA.
EMBL; JX901306; AGH08369.1; -; Viral_cRNA.
EMBL; JX901308; AGH08371.1; -; Viral_cRNA.
EMBL; JX901309; AGH08372.1; -; Viral_cRNA.
EMBL; JX901316; AGH08379.1; -; Viral_cRNA.
EMBL; JX901343; AGH08406.1; -; Viral_cRNA.
EMBL; JX901370; AGH08433.1; -; Viral_cRNA.
EMBL; JX901371; AGH08434.1; -; Viral_cRNA.
EMBL; KJ607167; AIC84183.1; -; Viral_cRNA.
EMBL; KJ607168; AIC84189.1; -; Viral_cRNA.
EMBL; KM056358; AIQ78374.1; -; Viral_cRNA.
EMBL; KU159667; ANA50356.1; -; Viral_cRNA.
EMBL; KU159668; ANA50357.1; -; Viral_cRNA.
EMBL; KU159669; ANA50358.1; -; Viral_cRNA.
EMBL; KU159670; ANA50359.1; -; Viral_cRNA.
EMBL; KU159671; ANA50360.1; -; Viral_cRNA.
EMBL; KU159672; ANA50361.1; -; Viral_cRNA.
EMBL; KU159673; ANA50362.1; -; Viral_cRNA.
EMBL; KU159674; ANA50363.1; -; Viral_cRNA.
EMBL; HF969123; CCX28745.1; -; Viral_cRNA.
EMBL; HF969124; CCX28746.1; -; Viral_cRNA.
EMBL; HF969160; CCX28782.1; -; Viral_cRNA.
Proteomes; UP000106573; Genome.
Proteomes; UP000115710; Genome.
Proteomes; UP000140431; Genome.
Proteomes; UP000144070; Genome.
GO; GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0019031; C:viral envelope; IEA:UniProtKB-KW.
GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
GO; GO:0019064; P:fusion of virus membrane with host plasma membrane; IEA:UniProtKB-KW.
InterPro; IPR000776; Fusion_F0_Paramyxovir.
Pfam; PF00523; Fusion_gly; 1.
3: Inferred from homology;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000106573,
ECO:0000313|Proteomes:UP000115710, ECO:0000313|Proteomes:UP000140431,
ECO:0000313|Proteomes:UP000144070};
Disulfide bond {ECO:0000256|SAAS:SAAS00628577};
Fusion of virus membrane with host cell membrane
{ECO:0000256|SAAS:SAAS00628576};
Fusion of virus membrane with host membrane
{ECO:0000256|SAAS:SAAS00628576};
Host cell membrane {ECO:0000256|SAAS:SAAS00628578};
Host membrane {ECO:0000256|SAAS:SAAS00628578};
Membrane {ECO:0000256|RuleBase:RU003705,
ECO:0000256|SAAS:SAAS00628574, ECO:0000256|SAAS:SAAS00628578};
Transmembrane {ECO:0000256|RuleBase:RU003705,
ECO:0000256|SAAS:SAAS00628574};
Transmembrane helix {ECO:0000256|RuleBase:RU003705,
ECO:0000256|SAAS:SAAS00628574};
Viral envelope protein {ECO:0000256|RuleBase:RU003705,
ECO:0000256|SAAS:SAAS00628570};
Viral penetration into host cytoplasm {ECO:0000256|SAAS:SAAS00628576};
Virion {ECO:0000256|RuleBase:RU003705, ECO:0000256|SAAS:SAAS00628570};
Virus entry into host cell {ECO:0000256|SAAS:SAAS00628576}.
TRANSMEM 501 527 Helical. {ECO:0000256|RuleBase:RU003705}.
COILED 467 498 {ECO:0000256|SAM:Coils}.
SEQUENCE 553 AA; 58910 MW; F09767CFDCCE4493 CRC64;
MGSRPSTKNP APMMLTIRVA LVLSCICPAN SIDGRPLAAA GIVVTGDKAV NIYTSSQTGS
IIVKLLPNLP KDKEACAKAP LDAYNRTLTT LLTPLGDSIR RIQESVTTSG GGRQGRLIGA
IIGGVALGVA TAAQITAAAA LIQAKQNAAN ILRLKESIAA TNEAVHEVTD GLSQLAVAVG
KMQQFVNDQF NKTAQELDCI KIAQQVGVEL NLYLTELTTV FGPQITSPAL NKLTIQALYN
LAGGNMDYLL TKLGIGNNQL SSLIGSGLIT GNPILYDSQT QLLGIQVTLP SVGNLNNMRA
TYLETLSVST TRGFASALVP KVVTQVGSVI EELDTSYCIE TDLDLYCTRI VTFPMSPGIY
SCLSGNTSAC MYSKTEGALT TPYMTIKGSV IANCKMTTCR CVNPPGIISQ NYGEAVSLID
KQSCNVLSLG GITLRLSGEF DVTYQKNISI QDSQVIITGN LDISTELGNV NNSISNALNK
LEESNRKLDK VNVKLTSTSA LITYIVLTII SLVFGILSLI LACYLMYKQK AQQKTLLWLG
NNTLDQMRAT TKM


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