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GH11189p (Neuropilin and tolloid-like, isoform A)

 Q9VYC7_DROME            Unreviewed;       677 AA.
Q9VYC7; Q8SZJ8;
01-MAY-2000, integrated into UniProtKB/TrEMBL.
01-OCT-2002, sequence version 2.
05-DEC-2018, entry version 150.
SubName: Full=GH11189p {ECO:0000313|EMBL:AAL48461.1};
SubName: Full=Neuropilin and tolloid-like, isoform A {ECO:0000313|EMBL:AAF48276.2};
Name=Neto {ECO:0000313|EMBL:AAF48276.2,
ECO:0000313|FlyBase:FBgn0265416};
Synonyms=CG12727 {ECO:0000313|EMBL:AAF48276.2},
CG15751 {ECO:0000313|EMBL:AAF48276.2},
CG15752 {ECO:0000313|EMBL:AAF48276.2},
CG15753 {ECO:0000313|EMBL:AAF48276.2},
CG32635 {ECO:0000313|EMBL:AAF48276.2},
CT36003 {ECO:0000313|EMBL:AAF48276.2},
Dmel\CG44328 {ECO:0000313|EMBL:AAF48276.2},
net {ECO:0000313|EMBL:AAF48276.2}, NETO {ECO:0000313|EMBL:AAF48276.2},
neto {ECO:0000313|EMBL:AAF48276.2},
tld-like {ECO:0000313|EMBL:AAF48276.2};
ORFNames=CG44328 {ECO:0000313|FlyBase:FBgn0265416},
Dmel_CG44328 {ECO:0000313|EMBL:AAF48276.2};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AAF48276.2, ECO:0000313|Proteomes:UP000000803};
[1] {ECO:0000313|EMBL:AAF48276.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AAL48461.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Berkeley {ECO:0000313|EMBL:AAL48461.1};
Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J.,
Champe M., Chavez C., Dorsett V., Dresnek D., Farfan D., Frise E.,
George R., Gonzalez M., Guarin H., Kronmiller B., Li P., Liao G.,
Miranda A., Mungall C.J., Nunoo J., Pacleb J., Paragas V., Park S.,
Patel S., Phouanenavong S., Wan K., Yu C., Lewis S.E., Rubin G.M.,
Celniker S.;
Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|EMBL:AAF48276.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[4] {ECO:0000313|EMBL:AAF48276.2, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[5] {ECO:0000313|EMBL:AAF48276.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002).
[6] {ECO:0000313|EMBL:AAF48276.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[7] {ECO:0000313|EMBL:AAF48276.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[8] {ECO:0000313|EMBL:AAF48276.2}
NUCLEOTIDE SEQUENCE.
Berkeley Drosophila Genome Project;
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E.,
Yu C., Rubin G.;
"Drosophila melanogaster release 4 sequence.";
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AAF48276.2}
NUCLEOTIDE SEQUENCE.
O'Boyle S.T.;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[10] {ECO:0000313|EMBL:AAF48276.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[11] {ECO:0000313|EMBL:AAF48276.2, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
[12] {ECO:0000313|EMBL:AAF48276.2}
NUCLEOTIDE SEQUENCE.
PubMed=26109357; DOI=.1534/g3.115.018929;
FlyBase Consortium;
Matthews B.B., Dos Santos G., Crosby M.A., Emmert D.B.,
St Pierre S.E., Gramates L.S., Zhou P., Schroeder A.J., Falls K.,
Strelets V., Russo S.M., Gelbart W.M.;
"Gene Model Annotations for Drosophila melanogaster: Impact of High-
Throughput Data.";
G3 (Bethesda) 5:1721-1736(2015).
[13] {ECO:0000313|EMBL:AAF48276.2}
NUCLEOTIDE SEQUENCE.
PubMed=26109356; DOI=.1534/g3.115.018937;
FlyBase Consortium;
Crosby M.A., Gramates L.S., Dos Santos G., Matthews B.B.,
St Pierre S.E., Zhou P., Schroeder A.J., Falls K., Emmert D.B.,
Russo S.M., Gelbart W.M.;
"Gene Model Annotations for Drosophila melanogaster: The Rule-
Benders.";
G3 (Bethesda) 5:1737-1749(2015).
[14] {ECO:0000313|EMBL:AAF48276.2}
NUCLEOTIDE SEQUENCE.
FlyBase;
Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
-!- CAUTION: Lacks conserved residue(s) required for the propagation
of feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00059}.
-----------------------------------------------------------------------
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EMBL; AE014298; AAF48276.2; -; Genomic_DNA.
EMBL; AY070839; AAL48461.1; -; mRNA.
RefSeq; NP_727708.1; NM_167371.2.
UniGene; Dm.6259; -.
IntAct; Q9VYC7; 14.
STRING; 7227.FBpp0073611; -.
EnsemblMetazoa; FBtr0339702; FBpp0308759; FBgn0265416.
GeneID; 32303; -.
UCSC; CG32635-RA; d. melanogaster.
CTD; 32303; -.
FlyBase; FBgn0265416; Neto.
eggNOG; ENOG410IGDK; Eukaryota.
eggNOG; ENOG41102J7; LUCA.
OMA; LQNDFMC; -.
OrthoDB; EOG091G058I; -.
GenomeRNAi; 32303; -.
Proteomes; UP000000803; Chromosome X.
Bgee; FBgn0265416; Expressed in 9 organ(s), highest expression level in head.
GO; GO:0008328; C:ionotropic glutamate receptor complex; IDA:FlyBase.
GO; GO:0097482; C:muscle cell postsynaptic specialization; IDA:FlyBase.
GO; GO:0031594; C:neuromuscular junction; IDA:FlyBase.
GO; GO:0060361; P:flight; IMP:FlyBase.
GO; GO:0097688; P:glutamate receptor clustering; IMP:FlyBase.
GO; GO:0035187; P:hatching behavior; IMP:FlyBase.
GO; GO:0040011; P:locomotion; IMP:FlyBase.
GO; GO:0007528; P:neuromuscular junction development; IMP:FlyBase.
GO; GO:0007274; P:neuromuscular synaptic transmission; IMP:FlyBase.
GO; GO:0097106; P:postsynaptic density organization; IMP:FlyBase.
GO; GO:0001941; P:postsynaptic membrane organization; IMP:FlyBase.
GO; GO:0043113; P:receptor clustering; IMP:FlyBase.
GO; GO:0030510; P:regulation of BMP signaling pathway; IGI:FlyBase.
GO; GO:0050808; P:synapse organization; IMP:FlyBase.
CDD; cd00041; CUB; 2.
CDD; cd00112; LDLa; 1.
Gene3D; 2.60.120.290; -; 2.
InterPro; IPR000859; CUB_dom.
InterPro; IPR036055; LDL_receptor-like_sf.
InterPro; IPR002172; LDrepeatLR_classA_rpt.
InterPro; IPR035914; Sperma_CUB_dom_sf.
Pfam; PF00431; CUB; 2.
SMART; SM00042; CUB; 2.
SMART; SM00192; LDLa; 1.
SUPFAM; SSF49854; SSF49854; 2.
SUPFAM; SSF57424; SSF57424; 1.
PROSITE; PS01180; CUB; 2.
PROSITE; PS50068; LDLRA_2; 1.
2: Evidence at transcript level;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Disulfide bond {ECO:0000256|PROSITE-ProRule:PRU00124,
ECO:0000256|SAAS:SAAS01008102}; Membrane {ECO:0000256|SAM:Phobius};
Reference proteome {ECO:0000313|Proteomes:UP000000803};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius}.
TRANSMEM 437 460 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 139 254 CUB. {ECO:0000259|PROSITE:PS01180}.
DOMAIN 267 385 CUB. {ECO:0000259|PROSITE:PS01180}.
COILED 555 582 {ECO:0000256|SAM:Coils}.
DISULFID 392 404 {ECO:0000256|PROSITE-ProRule:PRU00124}.
DISULFID 399 417 {ECO:0000256|PROSITE-ProRule:PRU00124}.
DISULFID 411 426 {ECO:0000256|PROSITE-ProRule:PRU00124}.
SEQUENCE 677 AA; 75884 MW; AF1E0EC2ED77AECF CRC64;
MRRRGSTCSA QQPQQRPHKQ QQQQQQQNQR LIPGQRCSLL MLLIVGQAVY ASAGSEIIAN
RSASAGESLI MLSNFTVATP PPAPRFTSPF REQDVAEGEE LAGGGQVDWL DEQHPLTISR
PPRAGRSERQ AEEDQVDRCR LFVEGDPTKN ELYSPEYPNL YPKNINCTRV ITAPKGQIIR
LDFRNSFNIE AKEGCKFDFL EIRDGQYGFS TLIGKFCGTD FPPEITSKER YLWLHFHSDE
TIEYTGFSAV YEYLDRSRDA PSTDLNCTID KGGFEGFINS TDVPAEIWEQ VNRNKIALDC
IWRIQVKENW KIFLKFLDFK LSKPNDCQTN FLDIFPEQTV MPLRVKNFCG SAGESITAES
NILHLRFYAD QTAINSTFGI LFTAFRERGA ACTEDEYDCE DATCISKDLK CNNLDNCKFR
WDEEGCTSEA AGQSEHVVII VIVFGLILGG MVITFIVNCI RKIIRDQKII RDVPALSDGI
YHIDSFILEA PKSAIFVGLQ NDFMCDFSYS SDGQMAPNLG HETRDEEAAV GGDSDFDSQM
DSPKQTCDCD FELDVNDGEQ MEEDDEEELE EEQEQDHHVE DQEYDDGIGF SCDSDSGLTL
PEDDDEFVLV TGQCLPSNSS HSCSSSMQCS SGSSGREVAT SSSNSMELDM VLTPPPPPTL
GKPKSGVHPL KFLHKII


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