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GH23732p (HIF prolyl hydroxylase, isoform A)

 Q9VN98_DROME            Unreviewed;       325 AA.
Q9VN98;
01-MAY-2000, integrated into UniProtKB/TrEMBL.
01-MAY-2000, sequence version 1.
25-OCT-2017, entry version 132.
SubName: Full=GH23732p {ECO:0000313|EMBL:AAK93018.1};
SubName: Full=HIF prolyl hydroxylase, isoform A {ECO:0000313|EMBL:AAF52050.1};
Name=Hph {ECO:0000313|EMBL:AAF52050.1,
ECO:0000313|FlyBase:FBgn0264785};
Synonyms=0303 {ECO:0000313|EMBL:AAF52050.1},
04 {ECO:0000313|EMBL:AAF52050.1}, 31543 {ECO:0000313|EMBL:AAF52050.1},
anon-EST:Posey69 {ECO:0000313|EMBL:AAF52050.1},
CG1114 {ECO:0000313|EMBL:AAF52050.1},
CG14665 {ECO:0000313|EMBL:AAF52050.1},
CG2676 {ECO:0000313|EMBL:AAF52050.1},
CG31543 {ECO:0000313|EMBL:AAF52050.1},
CG44015 {ECO:0000313|EMBL:AAF52050.1,
ECO:0000313|FlyBase:FBgn0264785},
CR31541 {ECO:0000313|EMBL:AAF52050.1},
dHPH {ECO:0000313|EMBL:AAF52050.1},
Dm.egl-9 {ECO:0000313|EMBL:AAF52050.1},
Dmel\CG44015 {ECO:0000313|EMBL:AAF52050.1},
dmHPH {ECO:0000313|EMBL:AAF52050.1},
dPHD {ECO:0000313|EMBL:AAF52050.1},
dPHD2 {ECO:0000313|EMBL:AAF52050.1},
fga {ECO:0000313|EMBL:AAF52050.1}, hph {ECO:0000313|EMBL:AAF52050.1},
l(3)02255 {ECO:0000313|EMBL:AAF52050.1},
l(3)82Fe {ECO:0000313|EMBL:AAF52050.1},
l(3)S030304 {ECO:0000313|EMBL:AAF52050.1},
PHD {ECO:0000313|EMBL:AAF52050.1};
ORFNames=Dmel_CG44015 {ECO:0000313|EMBL:AAF52050.1};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AAF52050.1, ECO:0000313|Proteomes:UP000000803};
[1] {ECO:0000313|EMBL:AAF52050.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AAK93018.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Berkeley {ECO:0000313|EMBL:AAK93018.1};
Stapleton M., Brokstein P., Hong L., Agbayani A., Carlson J.,
Champe M., Chavez C., Dorsett V., Farfan D., Frise E., George R.,
Gonzalez M., Guarin H., Li P., Liao G., Miranda A., Mungall C.J.,
Nunoo J., Pacleb J., Paragas V., Park S., Phouanenavong S., Wan K.,
Yu C., Lewis S.E., Rubin G.M., Celniker S.;
Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|EMBL:AAF52050.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[4] {ECO:0000313|EMBL:AAF52050.1, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[5] {ECO:0000313|EMBL:AAF52050.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084.1-RESEARCH0084.20(2002).
[6] {ECO:0000313|EMBL:AAF52050.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[7] {ECO:0000313|EMBL:AAF52050.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[8] {ECO:0000313|EMBL:AAF52050.1}
NUCLEOTIDE SEQUENCE.
Berkeley Drosophila Genome Project;
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E.,
Yu C., Rubin G.;
"Drosophila melanogaster release 4 sequence.";
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AAF52050.1}
NUCLEOTIDE SEQUENCE.
Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S.,
Svirskas R., Rubin G.;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[10] {ECO:0000313|EMBL:AAF52050.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[11] {ECO:0000313|EMBL:AAF52050.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
[12] {ECO:0000313|EMBL:AAF52050.1}
NUCLEOTIDE SEQUENCE.
FlyBase;
Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
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EMBL; AE014297; AAF52050.1; -; Genomic_DNA.
EMBL; AY051594; AAK93018.1; -; mRNA.
RefSeq; NP_649525.1; NM_141268.3.
UniGene; Dm.20436; -.
SMR; Q9VN98; -.
EnsemblMetazoa; FBtr0334275; FBpp0306390; FBgn0264785.
GeneID; 40633; -.
UCSC; CG31543-RA; d. melanogaster.
CTD; 40633; -.
FlyBase; FBgn0264785; Hph.
eggNOG; KOG3710; Eukaryota.
eggNOG; ENOG410ZHZN; LUCA.
GeneTree; ENSGT00390000001936; -.
OMA; KHSAHPA; -.
OrthoDB; EOG091G03SP; -.
Reactome; R-DME-1234176; Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha.
GenomeRNAi; 40633; -.
Proteomes; UP000000803; Chromosome 3R.
Bgee; FBgn0264785; -.
ExpressionAtlas; Q9VN98; differential.
GO; GO:0005654; C:nucleoplasm; IDA:FlyBase.
GO; GO:0005506; F:iron ion binding; ISM:FlyBase.
GO; GO:0031418; F:L-ascorbic acid binding; IEA:InterPro.
GO; GO:0031545; F:peptidyl-proline 4-dioxygenase activity; ISS:FlyBase.
GO; GO:0031543; F:peptidyl-proline dioxygenase activity; IDA:FlyBase.
GO; GO:0008270; F:zinc ion binding; ISM:FlyBase.
GO; GO:0006974; P:cellular response to DNA damage stimulus; IMP:FlyBase.
GO; GO:0071456; P:cellular response to hypoxia; IMP:FlyBase.
GO; GO:0007424; P:open tracheal system development; IMP:FlyBase.
GO; GO:0019511; P:peptidyl-proline hydroxylation; IDA:FlyBase.
GO; GO:0018401; P:peptidyl-proline hydroxylation to 4-hydroxy-L-proline; ISS:FlyBase.
GO; GO:0030307; P:positive regulation of cell growth; IMP:FlyBase.
GO; GO:0006611; P:protein export from nucleus; IMP:FlyBase.
GO; GO:0008104; P:protein localization; IMP:FlyBase.
GO; GO:0001666; P:response to hypoxia; IMP:FlyBase.
GO; GO:0007430; P:terminal branching, open tracheal system; IMP:FlyBase.
InterPro; IPR005123; Oxoglu/Fe-dep_dioxygenase.
InterPro; IPR006620; Pro_4_hyd_alph.
Pfam; PF13640; 2OG-FeII_Oxy_3; 1.
SMART; SM00702; P4Hc; 1.
PROSITE; PS51471; FE2OG_OXY; 1.
2: Evidence at transcript level;
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Reference proteome {ECO:0000313|Proteomes:UP000000803}.
DOMAIN 150 248 Fe2OG dioxygenase.
{ECO:0000259|PROSITE:PS51471}.
SEQUENCE 325 AA; 36301 MW; 8F3FDCC407FA3466 CRC64;
MITSTTTDYK NFFKHSAHPA NAEQYFRELL DKRERRYEDL CRNIISDMNQ YGLSVVDDFL
GMETGLKILN EVRSMYNAGA FQDGQVVTNQ TPDAPAVRGD KIRGDKIKWV GGNEPGCSNV
WYLTNQIDSV VYRVNTMKDN GILGNYHIRE RTRAMVACYP GSGTHYVMHV DNPQKDGRVI
TAIYYLNINW DARESGGILR IRPTPGTTVA DIEPKFDRLI FFWSDIRNPH EVQPAHRTRY
AITVWYFDAK EREEALIRAK LENSKTNNLA AQAQAQQAEP DSTTTPPAAP ASSASSLPVS
MSTGTGALNA NVSSNSCATS SEICT


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