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Heat shock protein 90kDa beta (Grp94), member 1

 Q3UAD6_MOUSE            Unreviewed;       802 AA.
Q3UAD6;
11-OCT-2005, integrated into UniProtKB/TrEMBL.
11-OCT-2005, sequence version 1.
07-NOV-2018, entry version 136.
SubName: Full=Heat shock protein 90kDa beta (Grp94), member 1 {ECO:0000313|EMBL:EDL21440.1};
Name=Hsp90b1 {ECO:0000313|EMBL:EDL21440.1, ECO:0000313|MGI:MGI:98817};
Synonyms=Tra1 {ECO:0000313|MGI:MGI:98817};
ORFNames=mCG_8346 {ECO:0000313|EMBL:EDL21440.1};
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1] {ECO:0000313|EMBL:BAE30378.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE30378.1};
TISSUE=Amnion {ECO:0000313|EMBL:BAE40874.1},
Bone marrow {ECO:0000313|EMBL:BAE30378.1},
Heart {ECO:0000313|EMBL:BAE27505.1},
Kidney {ECO:0000313|EMBL:BAE40758.1}, and
Lung {ECO:0000313|EMBL:BAE38494.1};
PubMed=10349636; DOI=10.1016/S0076-6879(99)03004-9;
Carninci P., Hayashizaki Y.;
"High-efficiency full-length cDNA cloning.";
Methods Enzymol. 303:19-44(1999).
[2] {ECO:0000313|EMBL:BAE30378.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE30378.1};
TISSUE=Amnion {ECO:0000313|EMBL:BAE40874.1},
Bone marrow {ECO:0000313|EMBL:BAE30378.1},
Heart {ECO:0000313|EMBL:BAE27505.1},
Kidney {ECO:0000313|EMBL:BAE40758.1}, and
Lung {ECO:0000313|EMBL:BAE38494.1};
PubMed=11042159; DOI=10.1101/gr.145100;
Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M.,
Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.;
"Normalization and subtraction of cap-trapper-selected cDNAs to
prepare full-length cDNA libraries for rapid discovery of new genes.";
Genome Res. 10:1617-1630(2000).
[3] {ECO:0000313|EMBL:BAE30378.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE30378.1};
TISSUE=Amnion {ECO:0000313|EMBL:BAE40874.1},
Bone marrow {ECO:0000313|EMBL:BAE30378.1},
Heart {ECO:0000313|EMBL:BAE27505.1},
Kidney {ECO:0000313|EMBL:BAE40758.1}, and
Lung {ECO:0000313|EMBL:BAE38494.1};
PubMed=11076861; DOI=10.1101/gr.152600;
Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P.,
Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M.,
Sumi N., Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A.,
Yamamoto R., Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K.,
Fujiwake S., Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M.,
Yoneda Y., Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J.,
Okazaki Y., Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.;
"RIKEN integrated sequence analysis (RISA) system--384-format
sequencing pipeline with 384 multicapillary sequencer.";
Genome Res. 10:1757-1771(2000).
[4] {ECO:0000313|EMBL:BAE30378.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE30378.1};
TISSUE=Amnion {ECO:0000313|EMBL:BAE40874.1},
Bone marrow {ECO:0000313|EMBL:BAE30378.1},
Heart {ECO:0000313|EMBL:BAE27505.1},
Kidney {ECO:0000313|EMBL:BAE40758.1}, and
Lung {ECO:0000313|EMBL:BAE38494.1};
PubMed=11217851; DOI=10.1038/35055500;
The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM Consortium;
"Functional annotation of a full-length mouse cDNA collection.";
Nature 409:685-690(2001).
[5] {ECO:0000313|EMBL:BAE30378.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE30378.1};
TISSUE=Amnion {ECO:0000313|EMBL:BAE40874.1},
Bone marrow {ECO:0000313|EMBL:BAE30378.1},
Heart {ECO:0000313|EMBL:BAE27505.1},
Kidney {ECO:0000313|EMBL:BAE40758.1}, and
Lung {ECO:0000313|EMBL:BAE38494.1};
PubMed=12466851; DOI=10.1038/nature01266;
The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase I and II Team;
"Analysis of the mouse transcriptome based on functional annotation of
60,770 full-length cDNAs.";
Nature 420:563-573(2002).
[6] {ECO:0000313|EMBL:EDL21440.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Mixed {ECO:0000313|EMBL:EDL21440.1};
PubMed=12040188; DOI=10.1126/science.1069193;
Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R.,
Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A.,
Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.,
Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K.,
Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J.,
Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R.,
Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H.,
Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A.,
Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A.,
Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C.,
Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C.,
Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B.,
Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E.,
Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R.,
Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C.,
Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L.,
Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S.,
Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L.,
Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R.,
Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R.,
Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J.,
Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L.,
Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C.,
Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A.,
Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H.,
Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L.,
Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M.,
Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K.,
Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S.,
Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J.,
Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G.,
Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.;
"A comparison of whole-genome shotgun-derived mouse chromosome 16 and
the human genome.";
Science 296:1661-1671(2002).
[7] {ECO:0000313|EMBL:BAE30378.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE30378.1};
TISSUE=Bone marrow {ECO:0000313|EMBL:BAE30378.1}, and
Heart {ECO:0000313|EMBL:BAE27505.1};
Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K.,
Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S.,
Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N.,
Nishiyori H., Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D.,
Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A.,
Muramatsu M., Hayashizaki Y.;
Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases.
[8] {ECO:0000313|EMBL:BAE38494.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE40758.1};
TISSUE=Amnion {ECO:0000313|EMBL:BAE40874.1},
Kidney {ECO:0000313|EMBL:BAE40758.1}, and
Lung {ECO:0000313|EMBL:BAE38494.1};
Arakawa T., Carninci P., Fukuda S., Hashizume W., Hayashida K.,
Hori F., Iida J., Imamura K., Imotani K., Itoh M., Kanagawa S.,
Kawai J., Kojima M., Konno H., Murata M., Nakamura M., Ninomiya N.,
Nishiyori H., Nomura K., Ohno M., Sakazume N., Sano H., Sasaki D.,
Shibata K., Shiraki T., Tagami M., Tagami Y., Waki K., Watahiki A.,
Muramatsu M., Hayashizaki Y.;
Submitted (APR-2004) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:BAE30378.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE30378.1};
TISSUE=Amnion {ECO:0000313|EMBL:BAE40874.1},
Bone marrow {ECO:0000313|EMBL:BAE30378.1},
Heart {ECO:0000313|EMBL:BAE27505.1},
Kidney {ECO:0000313|EMBL:BAE40758.1}, and
Lung {ECO:0000313|EMBL:BAE38494.1};
The FANTOM Consortium;
Riken Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group);
"The Transcriptional Landscape of the Mammalian Genome.";
Science 309:1559-1563(2005).
[10] {ECO:0000313|EMBL:BAE30378.1}
NUCLEOTIDE SEQUENCE.
STRAIN=C57BL/6J {ECO:0000313|EMBL:BAE30378.1};
TISSUE=Amnion {ECO:0000313|EMBL:BAE40874.1},
Bone marrow {ECO:0000313|EMBL:BAE30378.1},
Heart {ECO:0000313|EMBL:BAE27505.1},
Kidney {ECO:0000313|EMBL:BAE40758.1}, and
Lung {ECO:0000313|EMBL:BAE38494.1};
PubMed=16141073; DOI=10.1126/science.1112009;
RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group) and the FANTOM Consortium;
"Antisense Transcription in the Mammalian Transcriptome.";
Science 309:1564-1566(2005).
[11] {ECO:0000313|EMBL:EDL21440.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Mixed {ECO:0000313|EMBL:EDL21440.1};
Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.;
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
[12] {ECO:0000213|PubMed:21183079}
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
"A tissue-specific atlas of mouse protein phosphorylation and
expression.";
Cell 143:1174-1189(2010).
[13] {ECO:0000213|PubMed:23806337}
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=23806337; DOI=10.1016/j.molcel.2013.06.001;
Park J., Chen Y., Tishkoff D.X., Peng C., Tan M., Dai L., Xie Z.,
Zhang Y., Zwaans B.M., Skinner M.E., Lombard D.B., Zhao Y.;
"SIRT5-mediated lysine desuccinylation impacts diverse metabolic
pathways.";
Mol. Cell 50:919-930(2013).
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EMBL; AK146885; BAE27505.1; -; mRNA.
EMBL; AK151413; BAE30378.1; -; mRNA.
EMBL; AK153550; BAE32087.1; -; mRNA.
EMBL; AK159974; BAE35526.1; -; mRNA.
EMBL; AK165975; BAE38494.1; -; mRNA.
EMBL; AK168952; BAE40758.1; -; mRNA.
EMBL; AK169090; BAE40874.1; -; mRNA.
EMBL; CH466539; EDL21440.1; -; Genomic_DNA.
RefSeq; NP_035761.1; NM_011631.1.
UniGene; Mm.87773; -.
SMR; Q3UAD6; -.
MaxQB; Q3UAD6; -.
PeptideAtlas; Q3UAD6; -.
PRIDE; Q3UAD6; -.
TopDownProteomics; Q3UAD6; -.
GeneID; 22027; -.
KEGG; mmu:22027; -.
CTD; 7184; -.
MGI; MGI:98817; Hsp90b1.
eggNOG; KOG0020; Eukaryota.
eggNOG; COG0326; LUCA.
HOVERGEN; HBG007374; -.
KO; K09487; -.
OMA; MRRMKEM; -.
OrthoDB; EOG091G0270; -.
ChiTaRS; Hsp90b1; mouse.
Bgee; ENSMUSG00000020048; Expressed in 281 organ(s), highest expression level in female gonad.
ExpressionAtlas; Q3UAD6; baseline and differential.
GO; GO:0005829; C:cytosol; IEA:Ensembl.
GO; GO:0005788; C:endoplasmic reticulum lumen; IEA:Ensembl.
GO; GO:0005789; C:endoplasmic reticulum membrane; IEA:Ensembl.
GO; GO:0030496; C:midbody; IEA:Ensembl.
GO; GO:0048471; C:perinuclear region of cytoplasm; IEA:Ensembl.
GO; GO:0032991; C:protein-containing complex; IEA:Ensembl.
GO; GO:0005524; F:ATP binding; IEA:InterPro.
GO; GO:0050750; F:low-density lipoprotein particle receptor binding; IEA:Ensembl.
GO; GO:0019903; F:protein phosphatase binding; IEA:Ensembl.
GO; GO:0003723; F:RNA binding; IEA:Ensembl.
GO; GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO; GO:0031247; P:actin rod assembly; IEA:Ensembl.
GO; GO:0071318; P:cellular response to ATP; IEA:Ensembl.
GO; GO:0043066; P:negative regulation of apoptotic process; IEA:Ensembl.
GO; GO:0006457; P:protein folding; IEA:InterPro.
GO; GO:0043666; P:regulation of phosphoprotein phosphatase activity; IEA:Ensembl.
GO; GO:0001666; P:response to hypoxia; IEA:Ensembl.
GO; GO:0030970; P:retrograde protein transport, ER to cytosol; IEA:Ensembl.
GO; GO:0030433; P:ubiquitin-dependent ERAD pathway; IEA:Ensembl.
CDD; cd00075; HATPase_c; 1.
Gene3D; 1.20.120.790; -; 1.
Gene3D; 3.30.565.10; -; 1.
HAMAP; MF_00505; HSP90; 1.
InterPro; IPR003594; HATPase_C.
InterPro; IPR036890; HATPase_C_sf.
InterPro; IPR019805; Heat_shock_protein_90_CS.
InterPro; IPR037196; HSP90_C.
InterPro; IPR001404; Hsp90_fam.
InterPro; IPR020575; Hsp90_N.
InterPro; IPR020568; Ribosomal_S5_D2-typ_fold.
PANTHER; PTHR11528; PTHR11528; 1.
Pfam; PF02518; HATPase_c; 1.
Pfam; PF00183; HSP90; 1.
PIRSF; PIRSF002583; Hsp90; 1.
PRINTS; PR00775; HEATSHOCK90.
SMART; SM00387; HATPase_c; 1.
SUPFAM; SSF110942; SSF110942; 1.
SUPFAM; SSF54211; SSF54211; 1.
SUPFAM; SSF55874; SSF55874; 1.
PROSITE; PS00298; HSP90; 1.
1: Evidence at protein level;
Coiled coil {ECO:0000256|SAM:Coils}; Signal {ECO:0000256|SAM:SignalP};
Stress response {ECO:0000313|EMBL:EDL21440.1}.
SIGNAL 1 21 {ECO:0000256|SAM:SignalP}.
CHAIN 22 802 {ECO:0000256|SAM:SignalP}.
/FTId=PRO_5010843409.
DOMAIN 96 255 HATPase_c. {ECO:0000259|SMART:SM00387}.
COILED 296 318 {ECO:0000256|SAM:Coils}.
SEQUENCE 802 AA; 92476 MW; BDF33B9BD86BFC5F CRC64;
MRVLWVLGLC CVLLTFGFVR ADDEVDVDGT VEEDLGKSRE GSRTDDEVVQ REEEAIQLDG
LNASQIRELR EKSEKFAFQA EVNRMMKLII NSLYKNKEIF LRELISNASD ALDKIRLISL
TDENALAGNE ELTVKIKCDK EKNLLHVTDT GVGMTREELV KNLGTIAKSG TSEFLNKMTE
AQEDGQSTSE LIGQFGVGFY SAFLVADKVI VTSKHNNDTQ HIWESDSNEF SVIADPRGNT
LGRGTTITLV LKEEASDYLE LDTIKNLVRK YSQFINFPIY VWSSKTETVE EPLEEDEAAK
EEKEESDDEA AVEEEEEEKK PKTKKVEKTV WDWELMNDIK PIWQRPSKEV EEDEYKAFYK
SFSKESDDPM AYIHFTAEGE VTFKSILFVP TSAPRGLFDE YGSKKSDYIK LYVRRVFITD
DFHDMMPKYL NFVKGVVDSD DLPLNVSRET LQQHKLLKVI RKKLVRKTLD MIKKIADEKY
NDTFWKEFGT NIKLGVIEDH SNRTRLAKLL RFQSSHHSTD ITSLDQYVER MKEKQDKIYF
MAGSSRKEAE SSPFVERLLK KGYEVIYLTE PVDEYCIQAL PEFDGKRFQN VAKEGVKFDE
SEKTKESREA TEKEFEPLLN WMKDKALKDK IEKAVVSQRL TESPCALVAS QYGWSGNMER
IMKAQAYQTG KDISTNYYAS QKKTFEINPR HPLIRDMLRR IKEDEDDKTV MDLAVVLFET
ATLRSGYLLP DTKAYGDRIE RMLRLSLNID PEAQVEEEPE EEPEDTSEDA EDSEQDEGEE
MDAGTEEEEE ETEKESTEKD EL


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