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Hemoglobin-1 (Hemoglobin I) (Hb I) (HbI) (Sulfide-reactive hemoglobin)

 GLB1_PHAPT              Reviewed;         143 AA.
P41260; Q9GV87;
01-FEB-1995, integrated into UniProtKB/Swiss-Prot.
23-JAN-2007, sequence version 4.
07-NOV-2018, entry version 91.
RecName: Full=Hemoglobin-1;
AltName: Full=Hemoglobin I;
Short=Hb I;
Short=HbI;
AltName: Full=Sulfide-reactive hemoglobin;
Phacoides pectinatus (Thick lucine) (Lucina pectinata).
Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Heterodonta;
Euheterodonta; Lucinoida; Lucinoidea; Lucinidae; Phacoides.
NCBI_TaxID=244486;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=10839619; DOI=10.1023/A:1020623011363;
Antommattei-Perez F.M., Rosado-Ruiz T., Cadilla C.L.,
Lopez-Garriga J.;
"The cDNA-derived amino acid sequence of hemoglobin I from Lucina
pectinata.";
J. Protein Chem. 18:831-836(1999).
[2]
CHARACTERIZATION.
PubMed=2398044;
Kraus D.W., Wittenberg J.B.;
"Hemoglobins of the Lucina pectinata/bacteria symbiosis. I. Molecular
properties, kinetics and equilibria of reactions with ligands.";
J. Biol. Chem. 265:16043-16053(1990).
[3]
PARTIAL PROTEIN SEQUENCE, ACETYLATION AT SER-2, AND X-RAY
CRYSTALLOGRAPHY (1.5 ANGSTROMS).
TISSUE=Gill;
PubMed=7966324; DOI=10.1006/jmbi.1994.1706;
Rizzi M., Wittenberg J.B., Coda A., Ascenzi P., Fasano M.,
Bolognesi M.;
"Structure of the sulfide-reactive hemoglobin from the clam Lucina
pectinata. Crystallographic analysis at 1.5-A resolution.";
J. Mol. Biol. 244:86-99(1994).
[4]
X-RAY CRYSTALLOGRAPHY (1.9 ANGSTROMS).
PubMed=8613980; DOI=10.1006/jmbi.1996.0228;
Rizzi M., Wittenberg J.B., Coda A., Ascenzi P., Bolognesi M.;
"Structural bases for sulfide recognition in Lucina pectinata
hemoglobin I.";
J. Mol. Biol. 258:1-5(1996).
[5]
X-RAY CRYSTALLOGRAPHY (1.43 ANGSTROMS), AND SEQUENCE REVISION.
PubMed=10423453; DOI=10.1016/S0006-3495(99)76959-6;
Bolognesi M., Rosano C., Losso R., Borassi A., Rizzi M.,
Wittenberg J.B., Boffi A., Ascenzi P.;
"Cyanide binding to Lucina pectinata hemoglobin I and to sperm whale
myoglobin: an X-ray crystallographic study.";
Biophys. J. 77:1093-1099(1999).
-!- FUNCTION: Serves to transport hydrogen sulfide to autotrophic
bacteria.
-!- SUBUNIT: Monomer.
-!- SUBCELLULAR LOCATION: Cytoplasm.
-!- MISCELLANEOUS: This molluscan globin lacks one of the heme-binding
histidine residues found in most other globins.
-!- SIMILARITY: Belongs to the globin family. {ECO:0000255|PROSITE-
ProRule:PRU00238}.
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EMBL; AF187049; AAG01380.1; -; mRNA.
PDB; 1B0B; X-ray; 1.43 A; A=2-141.
PDB; 1EBT; X-ray; 1.90 A; A=2-143.
PDB; 1FLP; X-ray; 1.50 A; A=2-143.
PDB; 1MOH; X-ray; 1.90 A; A=2-143.
PDBsum; 1B0B; -.
PDBsum; 1EBT; -.
PDBsum; 1FLP; -.
PDBsum; 1MOH; -.
ProteinModelPortal; P41260; -.
SMR; P41260; -.
iPTMnet; P41260; -.
EvolutionaryTrace; P41260; -.
GO; GO:0005576; C:extracellular region; IEA:InterPro.
GO; GO:0005833; C:hemoglobin complex; IEA:InterPro.
GO; GO:0020037; F:heme binding; IEA:InterPro.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0019825; F:oxygen binding; IEA:InterPro.
GO; GO:0015671; P:oxygen transport; IEA:InterPro.
Gene3D; 1.10.490.10; -; 1.
InterPro; IPR002336; Erythrocruorin.
InterPro; IPR000971; Globin.
InterPro; IPR009050; Globin-like_sf.
InterPro; IPR012292; Globin/Proto.
Pfam; PF00042; Globin; 1.
PRINTS; PR00611; ERYTHCRUORIN.
SUPFAM; SSF46458; SSF46458; 1.
PROSITE; PS01033; GLOBIN; 1.
1: Evidence at protein level;
3D-structure; Acetylation; Cytoplasm; Direct protein sequencing; Heme;
Iron; Metal-binding; Transport.
INIT_MET 1 1 Removed.
CHAIN 2 143 Hemoglobin-1.
/FTId=PRO_0000052492.
METAL 97 97 Iron (heme proximal ligand).
MOD_RES 2 2 N-acetylserine.
{ECO:0000269|PubMed:7966324}.
CONFLICT 49 49 K -> S (in Ref. 3; AA sequence).
{ECO:0000305}.
HELIX 5 36 {ECO:0000244|PDB:1B0B}.
HELIX 38 42 {ECO:0000244|PDB:1B0B}.
TURN 43 50 {ECO:0000244|PDB:1B0B}.
HELIX 53 55 {ECO:0000244|PDB:1B0B}.
HELIX 60 77 {ECO:0000244|PDB:1B0B}.
TURN 78 81 {ECO:0000244|PDB:1B0B}.
HELIX 83 99 {ECO:0000244|PDB:1B0B}.
HELIX 104 117 {ECO:0000244|PDB:1B0B}.
HELIX 118 121 {ECO:0000244|PDB:1B0B}.
HELIX 125 139 {ECO:0000244|PDB:1B0B}.
HELIX 140 142 {ECO:0000244|PDB:1B0B}.
SEQUENCE 143 AA; 14944 MW; 0DFB3A709E97BED5 CRC64;
MSLSAAQKDN VKSSWAKASA AWGTAGPEFF MALFDAHDDV FAKFSGLFKG AAKGTVKNTP
EMAAQAQSFK GLVSNWVDNL DNAGALEGQC KTFAANHKAR GISAGQLEAA FKVLAGFMKS
YGGDEGAWTA VAGALMGMIR PNM


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