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Histone chaperone ASF1B (Anti-silencing function protein 1-like protein b) (Anti-silencing function 1b protein) (Silencing group A protein 1)

 ASF1B_ARATH             Reviewed;         218 AA.
Q9LS09;
09-JAN-2007, integrated into UniProtKB/Swiss-Prot.
01-OCT-2000, sequence version 1.
25-APR-2018, entry version 102.
RecName: Full=Histone chaperone ASF1B;
AltName: Full=Anti-silencing function protein 1-like protein b;
Short=Anti-silencing function 1b protein;
AltName: Full=Silencing group A protein 1;
Name=ASF1B; Synonyms=SGA01, SGA1; OrderedLocusNames=At5g38110;
ORFNames=F16F17.110;
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=cv. Columbia;
Kaya H., Lee J., Araki T., Shibahara K.;
"Arabidopsis thaliana ASF1 genes.";
Submitted (JAN-2002) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H.,
Tabata S.;
"Structural analysis of Arabidopsis thaliana chromosome 5. XI.";
Submitted (JUN-1999) to the EMBL/GenBank/DDBJ databases.
[3]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
PubMed=27862469; DOI=10.1111/tpj.13415;
Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
Town C.D.;
"Araport11: a complete reannotation of the Arabidopsis thaliana
reference genome.";
Plant J. 89:789-804(2017).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
PubMed=14593172; DOI=10.1126/science.1088305;
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J.,
Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F.,
Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.,
Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J.,
Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y.,
Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P.,
Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F.,
Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M.,
Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J.,
Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T.,
Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y.,
Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.;
"Empirical analysis of transcriptional activity in the Arabidopsis
genome.";
Science 302:842-846(2003).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Brover V.V., Troukhan M.E., Alexandrov N.A., Lu Y.-P., Flavell R.B.,
Feldmann K.A.;
"Full-length cDNA from Arabidopsis thaliana.";
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases.
[6]
INTERACTION WITH TOUSLED, AND PHOSPHORYLATION.
STRAIN=cv. Columbia;
PubMed=15047893; DOI=10.1104/pp.103.038117;
Ehsan H., Reichheld J.-P., Durfee T., Roe J.L.;
"TOUSLED kinase activity oscillates during the cell cycle and
interacts with chromatin regulators.";
Plant Physiol. 134:1488-1499(2004).
-!- FUNCTION: Histone chaperone that facilitates histone deposition
and histone exchange and removal during nucleosome assembly and
disassembly. {ECO:0000250}.
-!- SUBUNIT: Interacts with histone H3 and histone H4 (By similarity).
Interacts strongly with the N-terminus of TOUSLED. {ECO:0000250,
ECO:0000269|PubMed:15047893}.
-!- INTERACTION:
Q39238:TOUSLED; NbExp=2; IntAct=EBI-2366572, EBI-2325484;
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
-!- PTM: Phosphorylated in vitro by TOUSLED.
{ECO:0000269|PubMed:15047893}.
-!- SIMILARITY: Belongs to the ASF1 family. {ECO:0000305}.
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EMBL; AB078340; BAC54104.1; -; mRNA.
EMBL; AB028606; BAA97545.1; -; Genomic_DNA.
EMBL; CP002688; AED94269.1; -; Genomic_DNA.
EMBL; AY114716; AAM48035.1; -; mRNA.
EMBL; AY072420; AAL62412.1; -; mRNA.
EMBL; AY086448; AAM63451.1; -; mRNA.
RefSeq; NP_198627.1; NM_123171.4.
UniGene; At.30436; -.
ProteinModelPortal; Q9LS09; -.
SMR; Q9LS09; -.
BioGrid; 19042; 2.
IntAct; Q9LS09; 2.
STRING; 3702.AT5G38110.1; -.
PaxDb; Q9LS09; -.
EnsemblPlants; AT5G38110.1; AT5G38110.1; AT5G38110.
GeneID; 833791; -.
Gramene; AT5G38110.1; AT5G38110.1; AT5G38110.
KEGG; ath:AT5G38110; -.
Araport; AT5G38110; -.
TAIR; locus:2144416; AT5G38110.
eggNOG; KOG3265; Eukaryota.
eggNOG; COG5137; LUCA.
HOGENOM; HOG000197425; -.
InParanoid; Q9LS09; -.
KO; K10753; -.
OMA; FNPFQFE; -.
OrthoDB; EOG09360MXQ; -.
PhylomeDB; Q9LS09; -.
PRO; PR:Q9LS09; -.
Proteomes; UP000006548; Chromosome 5.
ExpressionAtlas; Q9LS09; baseline and differential.
Genevisible; Q9LS09; AT.
GO; GO:0005737; C:cytoplasm; IDA:TAIR.
GO; GO:0005634; C:nucleus; IDA:TAIR.
GO; GO:0051301; P:cell division; IMP:TAIR.
GO; GO:0006333; P:chromatin assembly or disassembly; IEA:InterPro.
GO; GO:0009294; P:DNA mediated transformation; IMP:TAIR.
GO; GO:0000724; P:double-strand break repair via homologous recombination; IMP:TAIR.
GO; GO:0031567; P:mitotic cell size control checkpoint; IMP:TAIR.
GO; GO:0008361; P:regulation of cell size; IMP:TAIR.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
GO; GO:0010091; P:trichome branching; IMP:TAIR.
Gene3D; 2.60.40.1490; -; 1.
InterPro; IPR006818; ASF1-like.
InterPro; IPR036747; ASF1-like_sf.
PANTHER; PTHR12040; PTHR12040; 1.
Pfam; PF04729; ASF1_hist_chap; 1.
SUPFAM; SSF101546; SSF101546; 1.
1: Evidence at protein level;
Chaperone; Chromatin regulator; Complete proteome; Nucleus;
Phosphoprotein; Reference proteome; Transcription;
Transcription regulation.
CHAIN 1 218 Histone chaperone ASF1B.
/FTId=PRO_0000270798.
SEQUENCE 218 AA; 24701 MW; 80E29847E65E25FC CRC64;
MSSINITNVT VLDNPAPFVN PFQFEISYEC LTSLKDDLEW KLIYVGSAED ETYDQVLESV
LVGPVNVGNY RFVLQADSPD PLKIREEDII GVTVLLLTCS YMDQEFIRVG YYVNNDYDDE
QLREEPPTKV LIDKVQRNIL TDKPRVTKFP INFHPENEQT LGDGPAPTEP FADSVVNGEA
PVFLEQPQKL QEIEQFDDSD VNGEAIALLD QPQNLQET


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