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Histone deacetylase (EC 3.5.1.98)

 A0A0V1FX37_TRIPS        Unreviewed;       935 AA.
A0A0V1FX37;
16-MAR-2016, integrated into UniProtKB/TrEMBL.
16-MAR-2016, sequence version 1.
22-NOV-2017, entry version 13.
RecName: Full=Histone deacetylase {ECO:0000256|SAAS:SAAS00894283};
EC=3.5.1.98 {ECO:0000256|SAAS:SAAS00894283};
Name=HDAC11 {ECO:0000313|EMBL:KRY90417.1};
ORFNames=T4D_16841 {ECO:0000313|EMBL:KRY90417.1};
Trichinella pseudospiralis (Parasitic roundworm).
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
Trichocephalida; Trichinellidae; Trichinella.
NCBI_TaxID=6337 {ECO:0000313|EMBL:KRY90417.1, ECO:0000313|Proteomes:UP000054995};
[1] {ECO:0000313|EMBL:KRY90417.1, ECO:0000313|Proteomes:UP000054995}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ISS470 {ECO:0000313|EMBL:KRY90417.1};
Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
"Evolution of Trichinella species and genotypes.";
Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
-!- CATALYTIC ACTIVITY: Hydrolysis of an N(6)-acetyl-lysine residue of
a histone to yield a deacetylated histone.
{ECO:0000256|SAAS:SAAS00894227}.
-!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|SAAS:SAAS00894298}.
-!- CAUTION: The sequence shown here is derived from an
EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
preliminary data. {ECO:0000313|EMBL:KRY90417.1}.
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EMBL; JYDT01000021; KRY90417.1; -; Genomic_DNA.
Proteomes; UP000054995; Unassembled WGS sequence.
GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO; GO:0032041; F:NAD-dependent histone deacetylase activity (H3-K14 specific); IEA:UniProtKB-EC.
GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
GO; GO:0006355; P:regulation of transcription, DNA-templated; IEA:UniProtKB-KW.
GO; GO:0006351; P:transcription, DNA-templated; IEA:UniProtKB-KW.
CDD; cd12263; RRM_ABT1_like; 1.
Gene3D; 3.40.800.20; -; 1.
InterPro; IPR034353; ABT1/ESF2_RRM.
InterPro; IPR000286; His_deacetylse.
InterPro; IPR023801; His_deacetylse_dom.
InterPro; IPR037138; His_deacetylse_dom_sf.
InterPro; IPR035979; RBD_domain_sf.
InterPro; IPR000504; RRM_dom.
InterPro; IPR009686; Senescence/spartin.
InterPro; IPR023696; Ureohydrolase_dom_sf.
Pfam; PF00850; Hist_deacetyl; 1.
Pfam; PF00076; RRM_1; 1.
Pfam; PF06911; Senescence; 1.
PRINTS; PR01270; HDASUPER.
SMART; SM00360; RRM; 1.
SUPFAM; SSF52768; SSF52768; 1.
SUPFAM; SSF54928; SSF54928; 1.
PROSITE; PS50102; RRM; 1.
4: Predicted;
Chromatin regulator {ECO:0000256|SAAS:SAAS00894233};
Complete proteome {ECO:0000313|Proteomes:UP000054995};
Hydrolase {ECO:0000256|SAAS:SAAS00870288};
Nucleus {ECO:0000256|SAAS:SAAS00894277};
RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
Transcription {ECO:0000256|SAAS:SAAS00894290};
Transcription regulation {ECO:0000256|SAAS:SAAS00894290}.
DOMAIN 754 830 RRM. {ECO:0000259|PROSITE:PS50102}.
SEQUENCE 935 AA; 105872 MW; F10F1C1CDF22E2E1 CRC64;
MDITEEDFRR FNSSKLYAPL KEQGLHSFVF DPIYDIRFFG IEKLHPFDAG KWGRVYNKLV
ERGYINEQHI CRPREAQYDD LLIVHSKSYL STLQWNVLIA RIMEVPLLIF FPACVIDRKV
LKSFRYQTGG TVLAVRLAIE CGAAVNLGGG FHHCSSKSGG GFCPYADITL AIKFVFSQRL
VEKVMIVDLD AHQGNGHERD FLTSTDNVYI LDMYNCDIYP RDAKAKKAIR KAVEIKSQTS
DQRYFSLLKK ALDEAVLEFQ PELVLYNAGT DSLTNDPLPA VPIAMVFSGG YQRNSAERLR
MAINFMQLLR KYNLPSPFSL AMYGAVGAVC GIYITDWNQI EGAEELRAYS CVDQGLWFDE
NGLPDVAVGL YEGALELIDK AGNMPGATEN ENYLKMLSAR GMVVDRLQWL RSRCNGEEKS
QTADVEPPVC FLEAFEPCRD AELICQIDDG VQLYTKPPQS ESESELKTVG FISVGSWVYP
LLPDPKVGLM LPPNLDKEKL KQFEDIVHES TMCVDQKEPP KLTETEEKSG TYVALGIREC
AEKTSDIIER KSSLLSSRVS FSESKLAGYP RVQTGVHYLR KGTDQVGVAA SRLGKLLASE
ASKRMKKDGV VSKAVYGAAE VASGGICGAA AVWVSMEEAA RILGKSIANG SVRVMEQKYG
PSVATLTDDA LHTLGYCGAT AWNVHNIGPK AIAKETVREL GLSLSKEGSS RNLKMKKPSP
PQMEIAEIED KKKEKKKKLQ QESDFTLDES TEPGIIYMST IPYSMTVKQV RDILESYGTI
GRIYFHKEQV EGKNGKRRRR YTEGWVEFAD KRVAKRVAMM LNNKQVGGRK RSRAYECLWN
MKYLHRFKWY HLTEQLTYER NLHRQRLQME VSQAKREARF FSQQLEKGKH LSKLEQHVLK
KGGLWERYQR QIKQRKPFVE KKSVDRTKLL KSILQ


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