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Histone deacetylase 11

 F1NYW6_CHICK            Unreviewed;       358 AA.
F1NYW6;
03-MAY-2011, integrated into UniProtKB/TrEMBL.
26-JUN-2013, sequence version 2.
22-NOV-2017, entry version 48.
SubName: Full=Histone deacetylase 11 {ECO:0000313|Ensembl:ENSGALP00000008151};
Name=HDAC11 {ECO:0000313|Ensembl:ENSGALP00000008151};
Gallus gallus (Chicken).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
Phasianidae; Phasianinae; Gallus.
NCBI_TaxID=9031 {ECO:0000313|Ensembl:ENSGALP00000008151, ECO:0000313|Proteomes:UP000000539};
[1] {ECO:0000313|Ensembl:ENSGALP00000008151, ECO:0000313|Proteomes:UP000000539}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Red jungle fowl {ECO:0000313|Ensembl:ENSGALP00000008151,
ECO:0000313|Proteomes:UP000000539};
PubMed=15592404; DOI=10.1038/nature03154;
International Chicken Genome Sequencing Consortium;
Hillier L.W., Miller W., Birney E., Warren W., Hardison R.C.,
Ponting C.P., Bork P., Burt D.W., Groenen M.A.M., Delany M.E.,
Dodgson J.B., Chinwalla A.T., Cliften P.F., Clifton S.W.,
Delehaunty K.D., Fronick C., Fulton R.S., Graves T.A., Kremitzki C.,
Layman D., Magrini V., McPherson J.D., Miner T.L., Minx P., Nash W.E.,
Nhan M.N., Nelson J.O., Oddy L.G., Pohl C.S., Randall-Maher J.,
Smith S.M., Wallis J.W., Yang S.-P., Romanov M.N., Rondelli C.M.,
Paton B., Smith J., Morrice D., Daniels L., Tempest H.G.,
Robertson L., Masabanda J.S., Griffin D.K., Vignal A., Fillon V.,
Jacobbson L., Kerje S., Andersson L., Crooijmans R.P., Aerts J.,
van der Poel J.J., Ellegren H., Caldwell R.B., Hubbard S.J.,
Grafham D.V., Kierzek A.M., McLaren S.R., Overton I.M., Arakawa H.,
Beattie K.J., Bezzubov Y., Boardman P.E., Bonfield J.K.,
Croning M.D.R., Davies R.M., Francis M.D., Humphray S.J., Scott C.E.,
Taylor R.G., Tickle C., Brown W.R.A., Rogers J., Buerstedde J.-M.,
Wilson S.A., Stubbs L., Ovcharenko I., Gordon L., Lucas S.,
Miller M.M., Inoko H., Shiina T., Kaufman J., Salomonsen J.,
Skjoedt K., Wong G.K.-S., Wang J., Liu B., Wang J., Yu J., Yang H.,
Nefedov M., Koriabine M., Dejong P.J., Goodstadt L., Webber C.,
Dickens N.J., Letunic I., Suyama M., Torrents D., von Mering C.,
Zdobnov E.M., Makova K., Nekrutenko A., Elnitski L., Eswara P.,
King D.C., Yang S.-P., Tyekucheva S., Radakrishnan A., Harris R.S.,
Chiaromonte F., Taylor J., He J., Rijnkels M., Griffiths-Jones S.,
Ureta-Vidal A., Hoffman M.M., Severin J., Searle S.M.J., Law A.S.,
Speed D., Waddington D., Cheng Z., Tuzun E., Eichler E., Bao Z.,
Flicek P., Shteynberg D.D., Brent M.R., Bye J.M., Huckle E.J.,
Chatterji S., Dewey C., Pachter L., Kouranov A., Mourelatos Z.,
Hatzigeorgiou A.G., Paterson A.H., Ivarie R., Brandstrom M.,
Axelsson E., Backstrom N., Berlin S., Webster M.T., Pourquie O.,
Reymond A., Ucla C., Antonarakis S.E., Long M., Emerson J.J.,
Betran E., Dupanloup I., Kaessmann H., Hinrichs A.S., Bejerano G.,
Furey T.S., Harte R.A., Raney B., Siepel A., Kent W.J., Haussler D.,
Eyras E., Castelo R., Abril J.F., Castellano S., Camara F., Parra G.,
Guigo R., Bourque G., Tesler G., Pevzner P.A., Smit A., Fulton L.A.,
Mardis E.R., Wilson R.K.;
"Sequence and comparative analysis of the chicken genome provide
unique perspectives on vertebrate evolution.";
Nature 432:695-716(2004).
[2] {ECO:0000313|Ensembl:ENSGALP00000008151}
IDENTIFICATION.
STRAIN=Red jungle fowl {ECO:0000313|Ensembl:ENSGALP00000008151};
Ensembl;
Submitted (JUL-2011) to UniProtKB.
-!- CAUTION: The sequence shown here is derived from an Ensembl
automatic analysis pipeline and should be considered as
preliminary data. {ECO:0000313|Ensembl:ENSGALP00000008151}.
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EMBL; AC145911; -; NOT_ANNOTATED_CDS; Genomic_DNA.
RefSeq; NP_001264070.1; NM_001277141.1.
UniGene; Gga.11485; -.
ProteinModelPortal; F1NYW6; -.
STRING; 9031.ENSGALP00000008151; -.
PaxDb; F1NYW6; -.
Ensembl; ENSGALT00000008165; ENSGALP00000008151; ENSGALG00000005092.
GeneID; 415978; -.
CTD; 79885; -.
eggNOG; KOG1344; Eukaryota.
eggNOG; COG0123; LUCA.
GeneTree; ENSGT00900000140987; -.
InParanoid; F1NYW6; -.
OMA; RVFTFSM; -.
OrthoDB; EOG091G0EQP; -.
TreeFam; TF106176; -.
Proteomes; UP000000539; Chromosome 12.
Bgee; ENSGALG00000005092; -.
GO; GO:0070062; C:extracellular exosome; IEA:Ensembl.
GO; GO:0000118; C:histone deacetylase complex; IEA:Ensembl.
GO; GO:0005886; C:plasma membrane; IEA:Ensembl.
GO; GO:0004407; F:histone deacetylase activity; IEA:Ensembl.
Gene3D; 3.40.800.20; -; 1.
InterPro; IPR000286; His_deacetylse.
InterPro; IPR023801; His_deacetylse_dom.
InterPro; IPR037138; His_deacetylse_dom_sf.
InterPro; IPR023696; Ureohydrolase_dom_sf.
Pfam; PF00850; Hist_deacetyl; 1.
PRINTS; PR01270; HDASUPER.
SUPFAM; SSF52768; SSF52768; 1.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000000539};
Hydrolase {ECO:0000256|SAAS:SAAS00870288};
Reference proteome {ECO:0000313|Proteomes:UP000000539}.
DOMAIN 36 315 Hist_deacetyl.
{ECO:0000259|Pfam:PF00850}.
SEQUENCE 358 AA; 39906 MW; C61F98701E1BCD98 CRC64;
MPHRTELYEG VPPTCWPIVY SPDYNITFMG LEKLHPFDAG KWGKVINFLK EEKLIGDDLI
VQAREATDED LLVVHTRRYL NKLKWSFVVA TITEIPPVLF LPNFLVQRKV LKPLRTQTGG
TIMAGKLAVD RGWAINVGGG FHHCSSDKGG GFCAYADITL AIKFLFERVP GVSKATIIDL
DAHQGNGHER DFMNDHRVYI MDAYNRYIYP GDGFAKRAIK RKVELEWGTE DTEYLQKVHT
HVEGALNELK PDIIVYNAGT DILDGDPLGG LAISPQGIVK RDEVVFKAAR SRGIPILMVT
SGGYQKRTAR IIADSILNLH NLGLIDKELA TSEAESPKVD QMIRDSVTDL TNLTCSDG


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