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Homeobox protein Hox-A10 (Homeobox protein Hox-1.8) (Homeobox protein Hox-1H) (PL)

 HXA10_HUMAN             Reviewed;         410 AA.
P31260; O43370; O43605; Q15949; Q504T1;
01-JUL-1993, integrated into UniProtKB/Swiss-Prot.
20-APR-2010, sequence version 3.
12-SEP-2018, entry version 185.
RecName: Full=Homeobox protein Hox-A10;
AltName: Full=Homeobox protein Hox-1.8;
AltName: Full=Homeobox protein Hox-1H;
AltName: Full=PL;
Name=HOXA10; Synonyms=HOX1H;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND ALTERNATIVE SPLICING.
PubMed=1676505; DOI=10.1093/nar/19.12.3443;
Lowney P., Corral J.C., Detmer K., Lebeau M.M., Deaven L.,
Lawrence H.J., Largman C.;
"A human Hox 1 homeobox gene exhibits myeloid-specific expression of
alternative transcripts in human hematopoietic cells.";
Nucleic Acids Res. 19:3443-3449(1991).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
Mi X., Winters J.L., Stevens D.B., Fleischman R.A.;
Submitted (DEC-1997) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
TISSUE=Caudate nucleus;
PubMed=14702039; DOI=10.1038/ng1285;
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A.,
Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M.,
Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y.,
Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M.,
Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K.,
Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S.,
Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J.,
Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y.,
Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N.,
Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S.,
Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y.,
Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T.,
Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y.,
Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S.,
Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T.,
Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M.,
Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T.,
Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K.,
Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R.,
Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human
cDNAs.";
Nat. Genet. 36:40-45(2004).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=12853948; DOI=10.1038/nature01782;
Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H.,
Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R.,
Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E.,
Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Cordes M., Du H.,
Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A.,
Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J.,
Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A.,
Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S.,
Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M.,
Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C.,
Latreille P., Miller N., Johnson D., Murray J., Woessner J.P.,
Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J.,
Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L.,
Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R.,
Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E.,
Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K.,
Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S.,
Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M.,
Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R.,
Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D.,
Waterston R.H., Wilson R.K.;
"The DNA sequence of human chromosome 7.";
Nature 424:157-164(2003).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Mural R.J., Istrail S., Sutton G., Florea L., Halpern A.L.,
Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
Venter J.C.;
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2), AND NUCLEOTIDE
SEQUENCE [LARGE SCALE MRNA] OF 2-410 (ISOFORM 1).
TISSUE=Muscle, and Salivary gland;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[7]
NUCLEOTIDE SEQUENCE [MRNA] OF 318-400.
PubMed=2573064; DOI=10.1073/pnas.86.21.8536;
Shen W.-F., Largman C., Lowney P., Corral J.C., Detmer K.,
Hauser C.A., Simonitch T.A., Hack F.M., Lawrence H.J.;
"Lineage-restricted expression of homeobox-containing genes in human
hematopoietic cell lines.";
Proc. Natl. Acad. Sci. U.S.A. 86:8536-8540(1989).
[8]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 336-396.
PubMed=2574852; DOI=10.1093/nar/17.24.10385;
Acampora D., D'Esposito M., Faiella A., Pannese M., Migliaccio E.,
Morelli F., Stornaiuolo A., Nigro V., Simeone A., Boncinelli E.;
"The human HOX gene family.";
Nucleic Acids Res. 17:10385-10402(1989).
[9]
NUCLEOTIDE SEQUENCE [MRNA] OF 349-387.
PubMed=7906121; DOI=10.1016/0006-2952(94)90447-2;
Castronovo V., Kusaka M., Chariot A., Gielen J., Sobel M.;
"Homeobox genes: potential candidates for the transcriptional control
of the transformed and invasive phenotype.";
Biochem. Pharmacol. 47:137-143(1994).
[10]
INTERACTION WITH SIRT2.
PubMed=15213244; DOI=10.1093/jb/mvh084;
Bae N.S., Swanson M.J., Vassilev A., Howard B.H.;
"Human histone deacetylase SIRT2 interacts with the homeobox
transcription factor HOXA10.";
J. Biochem. 135:695-700(2004).
-!- FUNCTION: Sequence-specific transcription factor which is part of
a developmental regulatory system that provides cells with
specific positional identities on the anterior-posterior axis.
Binds to the DNA sequence 5'-AA[AT]TTTTATTAC-3'.
-!- SUBUNIT: Interacts with SIRT2; the interaction is direct.
{ECO:0000269|PubMed:15213244}.
-!- INTERACTION:
P17947:SPI1; NbExp=2; IntAct=EBI-2293516, EBI-2293548;
-!- SUBCELLULAR LOCATION: Nucleus.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=2;
Name=1; Synonyms=PL1;
IsoId=P31260-1; Sequence=Displayed;
Name=2; Synonyms=PL2;
IsoId=P31260-2; Sequence=VSP_002384, VSP_002385;
-!- SIMILARITY: Belongs to the Abd-B homeobox family. {ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=AAB96917.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};
Sequence=AAH13971.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};
Sequence=CAB86198.1; Type=Frameshift; Positions=Several; Evidence={ECO:0000305};
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EMBL; X58430; CAB86198.1; ALT_FRAME; Genomic_DNA.
EMBL; AF040714; AAB96917.1; ALT_INIT; Genomic_DNA.
EMBL; AK312450; BAG35357.1; -; mRNA.
EMBL; AC004080; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; CH471073; EAW93885.1; -; Genomic_DNA.
EMBL; BC013971; AAH13971.1; ALT_INIT; mRNA.
EMBL; BC071843; AAH71843.1; -; mRNA.
EMBL; BC094807; AAH94807.1; -; mRNA.
EMBL; M30599; AAA36006.1; -; mRNA.
EMBL; S69027; AAD14030.1; -; mRNA.
EMBL; S69029; AAD14031.1; -; mRNA.
CCDS; CCDS5410.2; -. [P31260-1]
PIR; I65264; I65264.
PIR; I65265; I65265.
PIR; S26402; S26402.
PIR; S28814; S28814.
RefSeq; NP_061824.3; NM_018951.3. [P31260-1]
UniGene; Hs.110637; -.
UniGene; Hs.659350; -.
ProteinModelPortal; P31260; -.
SMR; P31260; -.
BioGrid; 109446; 17.
IntAct; P31260; 8.
MINT; P31260; -.
STRING; 9606.ENSP00000283921; -.
iPTMnet; P31260; -.
PhosphoSitePlus; P31260; -.
BioMuta; HOXA10; -.
DMDM; 294862509; -.
MaxQB; P31260; -.
PaxDb; P31260; -.
PeptideAtlas; P31260; -.
PRIDE; P31260; -.
ProteomicsDB; 54766; -.
ProteomicsDB; 54767; -. [P31260-2]
DNASU; 3206; -.
Ensembl; ENST00000283921; ENSP00000283921; ENSG00000253293. [P31260-1]
Ensembl; ENST00000396344; ENSP00000379633; ENSG00000253293. [P31260-2]
GeneID; 3206; -.
KEGG; hsa:3206; -.
UCSC; uc011jzm.3; human. [P31260-1]
CTD; 3206; -.
DisGeNET; 3206; -.
EuPathDB; HostDB:ENSG00000253293.4; -.
GeneCards; HOXA10; -.
HGNC; HGNC:5100; HOXA10.
HPA; CAB019384; -.
MIM; 142957; gene.
neXtProt; NX_P31260; -.
OpenTargets; ENSG00000253293; -.
PharmGKB; PA29377; -.
eggNOG; KOG0487; Eukaryota.
eggNOG; ENOG4111FJP; LUCA.
GeneTree; ENSGT00910000143984; -.
HOGENOM; HOG000231182; -.
HOVERGEN; HBG052934; -.
InParanoid; P31260; -.
KO; K17443; -.
OMA; CRMEPPE; -.
OrthoDB; EOG091G0DAN; -.
PhylomeDB; P31260; -.
TreeFam; TF317819; -.
SIGNOR; P31260; -.
GeneWiki; Homeobox_A10; -.
GenomeRNAi; 3206; -.
PRO; PR:P31260; -.
Proteomes; UP000005640; Chromosome 7.
Bgee; ENSG00000253293; Expressed in 136 organ(s), highest expression level in endometrium.
CleanEx; HS_HOXA10; -.
ExpressionAtlas; P31260; baseline and differential.
Genevisible; P31260; HS.
GO; GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO; GO:0005634; C:nucleus; IDA:UniProtKB.
GO; GO:0005667; C:transcription factor complex; IEA:Ensembl.
GO; GO:0042826; F:histone deacetylase binding; IPI:UniProtKB.
GO; GO:0000978; F:RNA polymerase II proximal promoter sequence-specific DNA binding; IDA:NTNU_SB.
GO; GO:0000981; F:RNA polymerase II transcription factor activity, sequence-specific DNA binding; ISA:NTNU_SB.
GO; GO:0001077; F:transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding; IDA:NTNU_SB.
GO; GO:0009952; P:anterior/posterior pattern specification; IEA:Ensembl.
GO; GO:0030326; P:embryonic limb morphogenesis; IEA:Ensembl.
GO; GO:0008584; P:male gonad development; IEA:Ensembl.
GO; GO:0007275; P:multicellular organism development; TAS:ProtInc.
GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IDA:NTNU_SB.
GO; GO:0009954; P:proximal/distal pattern formation; IEA:Ensembl.
GO; GO:0007338; P:single fertilization; IEA:Ensembl.
GO; GO:0001501; P:skeletal system development; IEA:Ensembl.
GO; GO:0007283; P:spermatogenesis; TAS:ProtInc.
GO; GO:0060065; P:uterus development; IEA:Ensembl.
CDD; cd00086; homeodomain; 1.
InterPro; IPR009057; Homeobox-like_sf.
InterPro; IPR017970; Homeobox_CS.
InterPro; IPR001356; Homeobox_dom.
InterPro; IPR020479; Homeobox_metazoa.
Pfam; PF00046; Homeobox; 1.
PRINTS; PR00024; HOMEOBOX.
SMART; SM00389; HOX; 1.
SUPFAM; SSF46689; SSF46689; 1.
PROSITE; PS00027; HOMEOBOX_1; 1.
PROSITE; PS50071; HOMEOBOX_2; 1.
1: Evidence at protein level;
Alternative splicing; Complete proteome; Developmental protein;
DNA-binding; Homeobox; Nucleus; Reference proteome; Transcription;
Transcription regulation.
CHAIN 1 410 Homeobox protein Hox-A10.
/FTId=PRO_0000200090.
DNA_BIND 336 395 Homeobox. {ECO:0000255|PROSITE-
ProRule:PRU00108}.
COMPBIAS 43 56 Poly-Gly.
COMPBIAS 95 106 Poly-Gly.
COMPBIAS 133 137 Poly-Pro.
COMPBIAS 141 150 Poly-Pro.
COMPBIAS 225 232 Poly-Gly.
COMPBIAS 273 276 Poly-Pro.
VAR_SEQ 1 316 Missing (in isoform 2).
{ECO:0000303|PubMed:14702039,
ECO:0000303|PubMed:15489334}.
/FTId=VSP_002384.
VAR_SEQ 317 319 DSL -> MCQ (in isoform 2).
{ECO:0000303|PubMed:14702039,
ECO:0000303|PubMed:15489334}.
/FTId=VSP_002385.
CONFLICT 20 20 C -> S (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 75 75 L -> W (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 86 86 G -> R (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 153 154 QA -> HR (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 192 192 P -> R (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 216 216 L -> P (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 221 221 G -> A (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 231 231 G -> C (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 234 235 QQ -> HE (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 241 241 F -> V (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 248 248 R -> G (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 260 261 SA -> GS (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 292 292 A -> G (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 295 295 S -> R (in Ref. 1; CAB86198).
{ECO:0000305}.
CONFLICT 349 349 L -> S (in Ref. 9; AAD14031).
{ECO:0000305}.
CONFLICT 351 351 L -> F (in Ref. 9; AAD14031).
{ECO:0000305}.
CONFLICT 356 356 L -> H (in Ref. 9; AAD14030).
{ECO:0000305}.
CONFLICT 359 359 M -> R (in Ref. 9; AAD14030).
{ECO:0000305}.
CONFLICT 364 364 E -> R (in Ref. 9; AAD14030).
{ECO:0000305}.
CONFLICT 367 367 L -> I (in Ref. 9; AAD14030).
{ECO:0000305}.
CONFLICT 370 374 SRSVH -> ANALC (in Ref. 9; AAD14030).
{ECO:0000305}.
CONFLICT 377 377 D -> E (in Ref. 9; AAD14030).
{ECO:0000305}.
CONFLICT 380 380 V -> S (in Ref. 9; AAD14030).
{ECO:0000305}.
CONFLICT 387 387 R -> P (in Ref. 9; AAD14030/AAD14031).
{ECO:0000305}.
SEQUENCE 410 AA; 42414 MW; E9544C35145FE7A4 CRC64;
MSARKGYLLP SPNYPTTMSC SESPAANSFL VDSLISSGRG EAGGGGGGAG GGGGGGYYAH
GGVYLPPAAD LPYGLQSCGL FPTLGGKRNE AASPGSGGGG GGLGPGAHGY GPSPIDLWLD
APRSCRMEPP DGPPPPPQQQ PPPPPQPPQP APQATSCSFA QNIKEESSYC LYDSADKCPK
VSATAAELAP FPRGPPPDGC ALGTSSGVPV PGYFRLSQAY GTAKGYGSGG GGAQQLGAGP
FPAQPPGRGF DLPPALASGS ADAARKERAL DSPPPPTLAC GSGGGSQGDE EAHASSSAAE
ELSPAPSESS KASPEKDSLG NSKGENAANW LTAKSGRKKR CPYTKHQTLE LEKEFLFNMY
LTRERRLEIS RSVHLTDRQV KIWFQNRRMK LKKMNRENRI RELTANFNFS


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