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Homeobox protein Hox-A7 (Homeobox protein Hox 1.1) (Homeobox protein Hox-1A)

 HXA7_HUMAN              Reviewed;         230 AA.
P31268; A4D191; O43368; O43486; O95655; Q9NSC8; Q9UDM1;
01-JUL-1993, integrated into UniProtKB/Swiss-Prot.
02-NOV-2010, sequence version 3.
05-DEC-2018, entry version 170.
RecName: Full=Homeobox protein Hox-A7;
AltName: Full=Homeobox protein Hox 1.1;
AltName: Full=Homeobox protein Hox-1A;
Name=HOXA7; Synonyms=HOX1A;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT THR-18.
PubMed=11435435; DOI=10.1074/jbc.M104598200;
La Celle P.T., Polakowska R.R.;
"Human homeobox HOXA7 regulates keratinocyte transglutaminase type 1
and inhibits differentiation.";
J. Biol. Chem. 276:32844-32853(2001).
[2]
NUCLEOTIDE SEQUENCE [MRNA], AND VARIANT THR-18.
PubMed=9804983; DOI=10.1016/S0167-4781(98)00170-5;
McIlhatton M.A., Bremner P.S., McMullin M.F., Maxwell A.P.,
Winter P.C., Lappin T.R.;
"Sequence characterisation and expression of homeobox HOX A7 in the
multi-potential erythroleukaemic cell line TF-1.";
Biochim. Biophys. Acta 1442:329-333(1998).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANT THR-18.
PubMed=10911612; DOI=10.1385/MB:14:1:19;
Kim M.H., Jin H., Seol E.Y., Yoo M., Park H.W.;
"Sequence analysis and tissue specific expression of human HOXA7.";
Mol. Biotechnol. 14:19-24(2000).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND VARIANT THR-18.
TISSUE=Placenta;
Albrechtsen R., Wewer U.;
Submitted (FEB-1995) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=12690205; DOI=10.1126/science.1083423;
Scherer S.W., Cheung J., MacDonald J.R., Osborne L.R., Nakabayashi K.,
Herbrick J.-A., Carson A.R., Parker-Katiraee L., Skaug J., Khaja R.,
Zhang J., Hudek A.K., Li M., Haddad M., Duggan G.E., Fernandez B.A.,
Kanematsu E., Gentles S., Christopoulos C.C., Choufani S.,
Kwasnicka D., Zheng X.H., Lai Z., Nusskern D.R., Zhang Q., Gu Z.,
Lu F., Zeesman S., Nowaczyk M.J., Teshima I., Chitayat D., Shuman C.,
Weksberg R., Zackai E.H., Grebe T.A., Cox S.R., Kirkpatrick S.J.,
Rahman N., Friedman J.M., Heng H.H.Q., Pelicci P.G., Lo-Coco F.,
Belloni E., Shaffer L.G., Pober B., Morton C.C., Gusella J.F.,
Bruns G.A.P., Korf B.R., Quade B.J., Ligon A.H., Ferguson H.,
Higgins A.W., Leach N.T., Herrick S.R., Lemyre E., Farra C.G.,
Kim H.-G., Summers A.M., Gripp K.W., Roberts W., Szatmari P.,
Winsor E.J.T., Grzeschik K.-H., Teebi A., Minassian B.A., Kere J.,
Armengol L., Pujana M.A., Estivill X., Wilson M.D., Koop B.F.,
Tosi S., Moore G.E., Boright A.P., Zlotorynski E., Kerem B.,
Kroisel P.M., Petek E., Oscier D.G., Mould S.J., Doehner H.,
Doehner K., Rommens J.M., Vincent J.B., Venter J.C., Li P.W.,
Mural R.J., Adams M.D., Tsui L.-C.;
"Human chromosome 7: DNA sequence and biology.";
Science 300:767-772(2003).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=12853948; DOI=10.1038/nature01782;
Hillier L.W., Fulton R.S., Fulton L.A., Graves T.A., Pepin K.H.,
Wagner-McPherson C., Layman D., Maas J., Jaeger S., Walker R.,
Wylie K., Sekhon M., Becker M.C., O'Laughlin M.D., Schaller M.E.,
Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Cordes M., Du H.,
Sun H., Edwards J., Bradshaw-Cordum H., Ali J., Andrews S., Isak A.,
Vanbrunt A., Nguyen C., Du F., Lamar B., Courtney L., Kalicki J.,
Ozersky P., Bielicki L., Scott K., Holmes A., Harkins R., Harris A.,
Strong C.M., Hou S., Tomlinson C., Dauphin-Kohlberg S.,
Kozlowicz-Reilly A., Leonard S., Rohlfing T., Rock S.M.,
Tin-Wollam A.-M., Abbott A., Minx P., Maupin R., Strowmatt C.,
Latreille P., Miller N., Johnson D., Murray J., Woessner J.P.,
Wendl M.C., Yang S.-P., Schultz B.R., Wallis J.W., Spieth J.,
Bieri T.A., Nelson J.O., Berkowicz N., Wohldmann P.E., Cook L.L.,
Hickenbotham M.T., Eldred J., Williams D., Bedell J.A., Mardis E.R.,
Clifton S.W., Chissoe S.L., Marra M.A., Raymond C., Haugen E.,
Gillett W., Zhou Y., James R., Phelps K., Iadanoto S., Bubb K.,
Simms E., Levy R., Clendenning J., Kaul R., Kent W.J., Furey T.S.,
Baertsch R.A., Brent M.R., Keibler E., Flicek P., Bork P., Suyama M.,
Bailey J.A., Portnoy M.E., Torrents D., Chinwalla A.T., Gish W.R.,
Eddy S.R., McPherson J.D., Olson M.V., Eichler E.E., Green E.D.,
Waterston R.H., Wilson R.K.;
"The DNA sequence of human chromosome 7.";
Nature 424:157-164(2003).
[7]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
Venter J.C.;
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
[8]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-91, AND VARIANT THR-18.
Cho M., Kim M.H., Hwang C.Y., Min W.;
Submitted (MAR-1997) to the EMBL/GenBank/DDBJ databases.
[9]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 130-195.
PubMed=2576652;
Boncinelli E., Acampora D., Pannese M., D'Esposito M., Somma R.,
Gaudino G., Stornaiuolo A., Cafiero M., Faiella A., Simeone A.;
"Organization of human class I homeobox genes.";
Genome 31:745-756(1989).
-!- FUNCTION: Sequence-specific transcription factor which is part of
a developmental regulatory system that provides cells with
specific positional identities on the anterior-posterior axis.
-!- SUBCELLULAR LOCATION: Nucleus.
-!- SIMILARITY: Belongs to the Antp homeobox family. {ECO:0000305}.
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EMBL; AF026397; AAB94604.1; -; mRNA.
EMBL; AJ005814; CAA06713.1; -; mRNA.
EMBL; AF032095; AAD01939.2; -; Genomic_DNA.
EMBL; X84803; CAA59270.1; -; Genomic_DNA.
EMBL; X84804; CAA59270.1; JOINED; Genomic_DNA.
EMBL; CH236948; EAL24221.1; -; Genomic_DNA.
EMBL; AC004080; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; CH471073; EAW93877.1; -; Genomic_DNA.
EMBL; U92543; AAD00727.1; -; Genomic_DNA.
CCDS; CCDS5408.1; -.
PIR; S15536; S15536.
RefSeq; NP_008827.2; NM_006896.3.
UniGene; Hs.610216; -.
UniGene; Hs.660918; -.
ProteinModelPortal; P31268; -.
SMR; P31268; -.
BioGrid; 109444; 3.
IntAct; P31268; 4.
STRING; 9606.ENSP00000242159; -.
iPTMnet; P31268; -.
PhosphoSitePlus; P31268; -.
BioMuta; HOXA7; -.
DMDM; 311033439; -.
MaxQB; P31268; -.
PaxDb; P31268; -.
PeptideAtlas; P31268; -.
PRIDE; P31268; -.
ProteomicsDB; 54769; -.
DNASU; 3204; -.
Ensembl; ENST00000242159; ENSP00000242159; ENSG00000122592.
GeneID; 3204; -.
KEGG; hsa:3204; -.
UCSC; uc003sys.4; human.
CTD; 3204; -.
DisGeNET; 3204; -.
EuPathDB; HostDB:ENSG00000122592.7; -.
GeneCards; HOXA7; -.
HGNC; HGNC:5108; HOXA7.
HPA; HPA074048; -.
MIM; 142950; gene.
neXtProt; NX_P31268; -.
OpenTargets; ENSG00000122592; -.
PharmGKB; PA29385; -.
eggNOG; KOG0489; Eukaryota.
eggNOG; ENOG410ZTBY; LUCA.
GeneTree; ENSGT00940000161013; -.
HOGENOM; HOG000231181; -.
HOVERGEN; HBG016849; -.
InParanoid; P31268; -.
KO; K09307; -.
OMA; HKDEGPA; -.
OrthoDB; EOG091G09XD; -.
PhylomeDB; P31268; -.
TreeFam; TF316310; -.
SIGNOR; P31268; -.
GeneWiki; HOXA7; -.
GenomeRNAi; 3204; -.
PRO; PR:P31268; -.
Proteomes; UP000005640; Chromosome 7.
Bgee; ENSG00000122592; Expressed in 137 organ(s), highest expression level in vagina.
CleanEx; HS_HOXA7; -.
ExpressionAtlas; P31268; baseline and differential.
Genevisible; P31268; HS.
GO; GO:0031965; C:nuclear membrane; IDA:HPA.
GO; GO:0005654; C:nucleoplasm; IDA:HPA.
GO; GO:0005634; C:nucleus; IBA:GO_Central.
GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; ISA:NTNU_SB.
GO; GO:0001077; F:proximal promoter DNA-binding transcription activator activity, RNA polymerase II-specific; IDA:NTNU_SB.
GO; GO:0000980; F:RNA polymerase II distal enhancer sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0000978; F:RNA polymerase II proximal promoter sequence-specific DNA binding; IDA:NTNU_SB.
GO; GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.
GO; GO:0003705; F:transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding; IBA:GO_Central.
GO; GO:0008134; F:transcription factor binding; IPI:UniProtKB.
GO; GO:0001525; P:angiogenesis; IEP:UniProtKB.
GO; GO:0009952; P:anterior/posterior pattern specification; IBA:GO_Central.
GO; GO:0048704; P:embryonic skeletal system morphogenesis; IEA:Ensembl.
GO; GO:0001953; P:negative regulation of cell-matrix adhesion; IDA:UniProtKB.
GO; GO:0045617; P:negative regulation of keratinocyte differentiation; IDA:MGI.
GO; GO:0002686; P:negative regulation of leukocyte migration; IDA:UniProtKB.
GO; GO:0045656; P:negative regulation of monocyte differentiation; IDA:UniProtKB.
GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IDA:UniProtKB.
GO; GO:0045892; P:negative regulation of transcription, DNA-templated; IDA:UniProtKB.
GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IDA:NTNU_SB.
GO; GO:0048863; P:stem cell differentiation; IEA:Ensembl.
CDD; cd00086; homeodomain; 1.
InterPro; IPR009057; Homeobox-like_sf.
InterPro; IPR017995; Homeobox_antennapedia.
InterPro; IPR001827; Homeobox_Antennapedia_CS.
InterPro; IPR017970; Homeobox_CS.
InterPro; IPR001356; Homeobox_dom.
InterPro; IPR020479; Homeobox_metazoa.
Pfam; PF00046; Homeodomain; 1.
PRINTS; PR00025; ANTENNAPEDIA.
PRINTS; PR00024; HOMEOBOX.
SMART; SM00389; HOX; 1.
SUPFAM; SSF46689; SSF46689; 1.
PROSITE; PS00032; ANTENNAPEDIA; 1.
PROSITE; PS00027; HOMEOBOX_1; 1.
PROSITE; PS50071; HOMEOBOX_2; 1.
2: Evidence at transcript level;
Complete proteome; Developmental protein; DNA-binding; Homeobox;
Nucleus; Polymorphism; Reference proteome; Transcription;
Transcription regulation.
CHAIN 1 230 Homeobox protein Hox-A7.
/FTId=PRO_0000200071.
DNA_BIND 130 189 Homeobox. {ECO:0000255|PROSITE-
ProRule:PRU00108}.
MOTIF 119 124 Antp-type hexapeptide.
COMPBIAS 157 160 Poly-Arg.
COMPBIAS 196 199 Poly-Ala.
COMPBIAS 214 230 Asp/Glu-rich (highly acidic).
COMPBIAS 223 230 Poly-Glu.
VARIANT 18 18 A -> T (in dbSNP:rs2301721).
{ECO:0000269|PubMed:10911612,
ECO:0000269|PubMed:11435435,
ECO:0000269|PubMed:9804983,
ECO:0000269|Ref.4, ECO:0000269|Ref.8}.
/FTId=VAR_028001.
CONFLICT 75 76 DA -> RR (in Ref. 8; AAD00727).
{ECO:0000305}.
CONFLICT 78 78 Missing (in Ref. 4; CAA59270).
{ECO:0000305}.
CONFLICT 174 174 I -> V (in Ref. 3; AAD01939).
{ECO:0000305}.
CONFLICT 194 195 PT -> RL (in Ref. 4; CAA59270).
{ECO:0000305}.
CONFLICT 195 195 T -> I (in Ref. 9; no nucleotide entry).
{ECO:0000305}.
CONFLICT 222 222 D -> Y (in Ref. 4; CAA59270).
{ECO:0000305}.
SEQUENCE 230 AA; 25355 MW; 8F77A6B0AFB516D5 CRC64;
MSSSYYVNAL FSKYTAGASL FQNAEPTSCS FAPNSQRSGY GAGAGAFAST VPGLYNVNSP
LYQSPFASGY GLGADAYGNL PCASYDQNIP GLCSDLAKGA CDKTDEGALH GAAEANFRIY
PWMRSSGPDR KRGRQTYTRY QTLELEKEFH FNRYLTRRRR IEIAHALCLT ERQIKIWFQN
RRMKWKKEHK DEGPTAAAAP EGAVPSAAAT AAADKADEED DDEEEEDEEE


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