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Homeobox protein Hox-A7 (Homeobox protein Hox-1.1) (Homeobox protein M6-12) (M6)

 HXA7_MOUSE              Reviewed;         229 AA.
P02830; A2RS54; Q544P0;
21-JUL-1986, integrated into UniProtKB/Swiss-Prot.
01-FEB-1996, sequence version 2.
28-MAR-2018, entry version 154.
RecName: Full=Homeobox protein Hox-A7;
AltName: Full=Homeobox protein Hox-1.1;
AltName: Full=Homeobox protein M6-12;
Short=M6;
Name=Hoxa7; Synonyms=Hox-1.1, Hoxa-7;
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=2885847; DOI=10.1073/pnas.84.15.5306;
Kessel M., Schulze F., Fibi M., Gruss P.;
"Primary structure and nuclear localization of a murine homeodomain
protein.";
Proc. Natl. Acad. Sci. U.S.A. 84:5306-5310(1987).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=BALB/cJ;
PubMed=7890170; DOI=10.1016/0378-1119(94)00850-R;
Parikh H., Shah S., Hilt D., Peterkofsky A.;
"Organization, sequence and regulation of expression of the murine
Hoxa-7 gene.";
Gene 154:237-242(1995).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=C57BL/6J; TISSUE=Colon;
PubMed=16141072; DOI=10.1126/science.1112014;
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M.,
Davis M.J., Wilming L.G., Aidinis V., Allen J.E.,
Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L.,
Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M.,
Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R.,
Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G.,
di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G.,
Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M.,
Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N.,
Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T.,
Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H.,
Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K.,
Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J.,
Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L.,
Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K.,
Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P.,
Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O.,
Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G.,
Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M.,
Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B.,
Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K.,
Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A.,
Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K.,
Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C.,
Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J.,
Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y.,
Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T.,
Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N.,
Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N.,
Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S.,
Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J.,
Hayashizaki Y.;
"The transcriptional landscape of the mammalian genome.";
Science 309:1559-1563(2005).
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Brain;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
NUCLEOTIDE SEQUENCE OF 126-229.
PubMed=2986010; DOI=10.1038/314713a0;
Colberg-Poley A.M., Voss S.D., Chowdhury K., Gruss P.;
"Structural analysis of murine genes containing homoeo box sequences
and their expression in embryonal carcinoma cells.";
Nature 314:713-718(1985).
[6]
NUCLEOTIDE SEQUENCE OF 129-197.
PubMed=2877873;
Breier G., Bucan M., Francke U., Colberg-Poley A.M., Gruss P.;
"Sequential expression of murine homeo box genes during F9 EC cell
differentiation.";
EMBO J. 5:2209-2215(1986).
-!- FUNCTION: Sequence-specific transcription factor which is part of
a developmental regulatory system that provides cells with
specific positional identities on the anterior-posterior axis.
-!- SUBCELLULAR LOCATION: Nucleus.
-!- SIMILARITY: Belongs to the Antp homeobox family. {ECO:0000305}.
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EMBL; M17192; AAA37833.1; -; mRNA.
EMBL; U15972; AAC52160.1; -; Genomic_DNA.
EMBL; AK033500; BAC28323.1; -; mRNA.
EMBL; BC131978; AAI31979.1; -; mRNA.
EMBL; BC132643; AAI32644.1; -; mRNA.
CCDS; CCDS20145.1; -.
PIR; A03314; A03314.
PIR; A28329; A28329.
RefSeq; NP_034585.1; NM_010455.2.
UniGene; Mm.294826; -.
ProteinModelPortal; P02830; -.
SMR; P02830; -.
BioGrid; 200372; 1.
IntAct; P02830; 1.
STRING; 10090.ENSMUSP00000048648; -.
PhosphoSitePlus; P02830; -.
MaxQB; P02830; -.
PaxDb; P02830; -.
PRIDE; P02830; -.
Ensembl; ENSMUST00000048715; ENSMUSP00000048648; ENSMUSG00000038236.
GeneID; 15404; -.
KEGG; mmu:15404; -.
UCSC; uc009byj.1; mouse.
CTD; 3204; -.
MGI; MGI:96179; Hoxa7.
eggNOG; KOG0489; Eukaryota.
eggNOG; ENOG410ZTBY; LUCA.
GeneTree; ENSGT00910000143983; -.
HOGENOM; HOG000231181; -.
HOVERGEN; HBG016849; -.
InParanoid; P02830; -.
KO; K09307; -.
OMA; WKKEHKD; -.
OrthoDB; EOG091G09XD; -.
PhylomeDB; P02830; -.
TreeFam; TF316310; -.
PRO; PR:P02830; -.
Proteomes; UP000000589; Chromosome 6.
Bgee; ENSMUSG00000038236; -.
CleanEx; MM_HOXA7; -.
ExpressionAtlas; P02830; baseline and differential.
Genevisible; P02830; MM.
GO; GO:0031965; C:nuclear membrane; ISO:MGI.
GO; GO:0005654; C:nucleoplasm; ISO:MGI.
GO; GO:0005634; C:nucleus; IDA:MGI.
GO; GO:0003677; F:DNA binding; IDA:MGI.
GO; GO:0003700; F:DNA binding transcription factor activity; IDA:MGI.
GO; GO:0000978; F:RNA polymerase II proximal promoter sequence-specific DNA binding; ISO:MGI.
GO; GO:0043565; F:sequence-specific DNA binding; ISO:MGI.
GO; GO:0008134; F:transcription factor binding; ISO:MGI.
GO; GO:0001077; F:transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding; ISO:MGI.
GO; GO:0001525; P:angiogenesis; IEA:Ensembl.
GO; GO:0009952; P:anterior/posterior pattern specification; IGI:MGI.
GO; GO:0048704; P:embryonic skeletal system morphogenesis; IGI:MGI.
GO; GO:0001953; P:negative regulation of cell-matrix adhesion; ISO:MGI.
GO; GO:0045617; P:negative regulation of keratinocyte differentiation; ISO:MGI.
GO; GO:0002686; P:negative regulation of leukocyte migration; ISO:MGI.
GO; GO:0045656; P:negative regulation of monocyte differentiation; ISO:MGI.
GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IDA:MGI.
GO; GO:0045892; P:negative regulation of transcription, DNA-templated; ISO:MGI.
GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IDA:MGI.
GO; GO:0048863; P:stem cell differentiation; IDA:MGI.
CDD; cd00086; homeodomain; 1.
InterPro; IPR009057; Homeobox-like_sf.
InterPro; IPR017995; Homeobox_antennapedia.
InterPro; IPR001827; Homeobox_Antennapedia_CS.
InterPro; IPR017970; Homeobox_CS.
InterPro; IPR001356; Homeobox_dom.
InterPro; IPR020479; Homeobox_metazoa.
Pfam; PF00046; Homeobox; 1.
PRINTS; PR00025; ANTENNAPEDIA.
PRINTS; PR00024; HOMEOBOX.
SMART; SM00389; HOX; 1.
SUPFAM; SSF46689; SSF46689; 1.
PROSITE; PS00032; ANTENNAPEDIA; 1.
PROSITE; PS00027; HOMEOBOX_1; 1.
PROSITE; PS50071; HOMEOBOX_2; 1.
2: Evidence at transcript level;
Complete proteome; Developmental protein; DNA-binding; Homeobox;
Nucleus; Reference proteome; Transcription; Transcription regulation.
CHAIN 1 229 Homeobox protein Hox-A7.
/FTId=PRO_0000200072.
DNA_BIND 129 188 Homeobox. {ECO:0000255|PROSITE-
ProRule:PRU00108}.
MOTIF 118 123 Antp-type hexapeptide.
COMPBIAS 156 159 Poly-Arg.
COMPBIAS 211 229 Asp/Glu-rich (highly acidic).
COMPBIAS 215 229 Poly-Glu.
CONFLICT 43 45 GAG -> APA (in Ref. 1; AAA37833).
{ECO:0000305}.
SEQUENCE 229 AA; 25682 MW; D36E6BD61D8D5C6F CRC64;
MSSSYYVNAL FSKYTAGASL FQNAEPTSCS FAPNSQRSGY GPGAGAFAST VPGLYNVNSP
LYQSPFASGY GLGADAYNLP CASYDQNIPG LCSDLAKGAC DKADEGVLHG PAEASFRIYP
WMRSSGPDRK RGRQTYTRYQ TLELEKEFHF NRYLTRRRRI EIAHALCLTE RQIKIWFQNR
RMKWKKEHKD ESQAPTAAPE DAVPSVSTAA DKADEEEEEE EEEEEEEEE


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