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Hydroxyacyl-CoA dehydrogenase

 F6XHT8_CANLF            Unreviewed;       287 AA.
F6XHT8;
31-OCT-2012, integrated into UniProtKB/TrEMBL.
31-OCT-2012, sequence version 1.
20-JUN-2018, entry version 36.
SubName: Full=Hydroxyacyl-CoA dehydrogenase {ECO:0000313|Ensembl:ENSCAFP00000016506};
Name=HADH {ECO:0000313|Ensembl:ENSCAFP00000016506,
ECO:0000313|VGNC:VGNC:41584};
Canis lupus familiaris (Dog) (Canis familiaris).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae;
Canis.
NCBI_TaxID=9615 {ECO:0000313|Ensembl:ENSCAFP00000016506, ECO:0000313|Proteomes:UP000002254};
[1] {ECO:0000313|Ensembl:ENSCAFP00000016506, ECO:0000313|Proteomes:UP000002254}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Boxer {ECO:0000313|Ensembl:ENSCAFP00000016506,
ECO:0000313|Proteomes:UP000002254};
PubMed=16341006; DOI=10.1038/nature04338;
Broad Sequencing Platform;
Lindblad-Toh K., Wade C.M., Mikkelsen T.S., Karlsson E.K., Jaffe D.B.,
Kamal M., Clamp M., Chang J.L., Kulbokas E.J. III, Zody M.C.,
Mauceli E., Xie X., Breen M., Wayne R.K., Ostrander E.A.,
Ponting C.P., Galibert F., Smith D.R., deJong P.J., Kirkness E.F.,
Alvarez P., Biagi T., Brockman W., Butler J., Chin C.-W., Cook A.,
Cuff J., Daly M.J., DeCaprio D., Gnerre S., Grabherr M., Kellis M.,
Kleber M., Bardeleben C., Goodstadt L., Heger A., Hitte C., Kim L.,
Koepfli K.-P., Parker H.G., Pollinger J.P., Searle S.M.J.,
Sutter N.B., Thomas R., Webber C., Baldwin J., Abebe A.,
Abouelleil A., Aftuck L., Ait-Zahra M., Aldredge T., Allen N., An P.,
Anderson S., Antoine C., Arachchi H., Aslam A., Ayotte L.,
Bachantsang P., Barry A., Bayul T., Benamara M., Berlin A.,
Bessette D., Blitshteyn B., Bloom T., Blye J., Boguslavskiy L.,
Bonnet C., Boukhgalter B., Brown A., Cahill P., Calixte N.,
Camarata J., Cheshatsang Y., Chu J., Citroen M., Collymore A.,
Cooke P., Dawoe T., Daza R., Decktor K., DeGray S., Dhargay N.,
Dooley K., Dooley K., Dorje P., Dorjee K., Dorris L., Duffey N.,
Dupes A., Egbiremolen O., Elong R., Falk J., Farina A., Faro S.,
Ferguson D., Ferreira P., Fisher S., FitzGerald M., Foley K.,
Foley C., Franke A., Friedrich D., Gage D., Garber M., Gearin G.,
Giannoukos G., Goode T., Goyette A., Graham J., Grandbois E.,
Gyaltsen K., Hafez N., Hagopian D., Hagos B., Hall J., Healy C.,
Hegarty R., Honan T., Horn A., Houde N., Hughes L., Hunnicutt L.,
Husby M., Jester B., Jones C., Kamat A., Kanga B., Kells C.,
Khazanovich D., Kieu A.C., Kisner P., Kumar M., Lance K., Landers T.,
Lara M., Lee W., Leger J.-P., Lennon N., Leuper L., LeVine S., Liu J.,
Liu X., Lokyitsang Y., Lokyitsang T., Lui A., Macdonald J., Major J.,
Marabella R., Maru K., Matthews C., McDonough S., Mehta T.,
Meldrim J., Melnikov A., Meneus L., Mihalev A., Mihova T., Miller K.,
Mittelman R., Mlenga V., Mulrain L., Munson G., Navidi A., Naylor J.,
Nguyen T., Nguyen N., Nguyen C., Nguyen T., Nicol R., Norbu N.,
Norbu C., Novod N., Nyima T., Olandt P., O'Neill B., O'Neill K.,
Osman S., Oyono L., Patti C., Perrin D., Phunkhang P., Pierre F.,
Priest M., Rachupka A., Raghuraman S., Rameau R., Ray V., Raymond C.,
Rege F., Rise C., Rogers J., Rogov P., Sahalie J., Settipalli S.,
Sharpe T., Shea T., Sheehan M., Sherpa N., Shi J., Shih D., Sloan J.,
Smith C., Sparrow T., Stalker J., Stange-Thomann N., Stavropoulos S.,
Stone C., Stone S., Sykes S., Tchuinga P., Tenzing P., Tesfaye S.,
Thoulutsang D., Thoulutsang Y., Topham K., Topping I., Tsamla T.,
Vassiliev H., Venkataraman V., Vo A., Wangchuk T., Wangdi T.,
Weiand M., Wilkinson J., Wilson A., Yadav S., Yang S., Yang X.,
Young G., Yu Q., Zainoun J., Zembek L., Zimmer A., Lander E.S.;
"Genome sequence, comparative analysis and haplotype structure of the
domestic dog.";
Nature 438:803-819(2005).
[2] {ECO:0000313|Ensembl:ENSCAFP00000016506}
IDENTIFICATION.
STRAIN=Boxer {ECO:0000313|Ensembl:ENSCAFP00000016506};
Ensembl;
Submitted (JUL-2011) to UniProtKB.
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EMBL; AAEX03016812; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AAEX03016813; -; NOT_ANNOTATED_CDS; Genomic_DNA.
STRING; 9615.ENSCAFP00000016506; -.
PaxDb; F6XHT8; -.
Ensembl; ENSCAFT00000017829; ENSCAFP00000016506; ENSCAFG00000011216.
VGNC; VGNC:41584; HADH.
eggNOG; KOG2304; Eukaryota.
eggNOG; COG1250; LUCA.
GeneTree; ENSGT00880000137923; -.
OMA; MAHPMGP; -.
OrthoDB; EOG091G089P; -.
TreeFam; TF300886; -.
Reactome; R-CFA-77310; Beta oxidation of lauroyl-CoA to decanoyl-CoA-CoA.
Reactome; R-CFA-77346; Beta oxidation of decanoyl-CoA to octanoyl-CoA-CoA.
Reactome; R-CFA-77348; Beta oxidation of octanoyl-CoA to hexanoyl-CoA.
Reactome; R-CFA-77350; Beta oxidation of hexanoyl-CoA to butanoyl-CoA.
Reactome; R-CFA-77352; Beta oxidation of butanoyl-CoA to acetyl-CoA.
Proteomes; UP000002254; Chromosome 32.
Bgee; ENSCAFG00000011216; -.
GO; GO:0005739; C:mitochondrion; IEA:Ensembl.
GO; GO:0005654; C:nucleoplasm; IEA:Ensembl.
GO; GO:0003857; F:3-hydroxyacyl-CoA dehydrogenase activity; IEA:Ensembl.
GO; GO:0070403; F:NAD+ binding; IEA:InterPro.
GO; GO:0006631; P:fatty acid metabolic process; IEA:InterPro.
Gene3D; 1.10.1040.10; -; 1.
InterPro; IPR022694; 3-OHacyl-CoA_DH.
InterPro; IPR006180; 3-OHacyl-CoA_DH_CS.
InterPro; IPR006176; 3-OHacyl-CoA_DH_NAD-bd.
InterPro; IPR006108; 3HC_DH_C.
InterPro; IPR008927; 6-PGluconate_DH-like_C_sf.
InterPro; IPR013328; 6PGD_dom2.
InterPro; IPR036291; NAD(P)-bd_dom_sf.
Pfam; PF00725; 3HCDH; 1.
Pfam; PF02737; 3HCDH_N; 1.
PIRSF; PIRSF000105; HCDH; 1.
SUPFAM; SSF48179; SSF48179; 1.
SUPFAM; SSF51735; SSF51735; 1.
PROSITE; PS00067; 3HCDH; 1.
4: Predicted;
Complete proteome {ECO:0000313|Proteomes:UP000002254};
Reference proteome {ECO:0000313|Proteomes:UP000002254}.
DOMAIN 8 187 3HCDH_N. {ECO:0000259|Pfam:PF02737}.
DOMAIN 189 286 3HCDH. {ECO:0000259|Pfam:PF00725}.
BINDING 46 46 Coenzyme A.
{ECO:0000256|PIRSR:PIRSR000105-3}.
BINDING 53 53 Coenzyme A.
{ECO:0000256|PIRSR:PIRSR000105-3}.
BINDING 122 122 Coenzyme A.
{ECO:0000256|PIRSR:PIRSR000105-3}.
SITE 143 143 Important for catalytic activity.
{ECO:0000256|PIRSR:PIRSR000105-1}.
SEQUENCE 287 AA; 31890 MW; E044BDE348D28666 CRC64;
RHRARGRAGR RGAGIAQVAA ATGHTVVLVD QTEDILAKSK KGIEESLRRV AKKKFAENPK
AGDEFVEKTL SSISTSTDAA SVVHSTDLVV EAIVENLKAK NELFKRLDKF ASEHTIFASN
TSSLQITNIA NATTRQDRFA GLHFFNPVPL MKLVEVIKTP MTSQKTYESL IDFTKVLGKH
PVSCKDTPGF IVNRLLIPYL MEAIRLYERG DASKEDIDTA MKLGAGYPLG PFELLDYVGL
DTTKFIMDGW YEMDPKNPLF QPIPSLNKLV AENKFGKKSG EGYYKYK


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