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Integrin alpha-D

 H3BKX8_MOUSE            Unreviewed;      1166 AA.
H3BKX8;
18-APR-2012, integrated into UniProtKB/TrEMBL.
18-APR-2012, sequence version 1.
28-MAR-2018, entry version 50.
SubName: Full=Integrin alpha-D {ECO:0000313|Ensembl:ENSMUSP00000135572};
Name=Itgad {ECO:0000313|Ensembl:ENSMUSP00000135572,
ECO:0000313|MGI:MGI:3578624};
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090 {ECO:0000313|Ensembl:ENSMUSP00000135572, ECO:0000313|Proteomes:UP000000589};
[1] {ECO:0000313|Ensembl:ENSMUSP00000135572, ECO:0000313|Proteomes:UP000000589}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000135572,
ECO:0000313|Proteomes:UP000000589};
PubMed=19468303; DOI=10.1371/journal.pbio.1000112;
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S.,
She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W.,
Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T.,
Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J.,
Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z.,
Lindblad-Toh K., Eichler E.E., Ponting C.P.;
"Lineage-specific biology revealed by a finished genome assembly of
the mouse.";
PLoS Biol. 7:E1000112-E1000112(2009).
[2] {ECO:0000213|PubMed:21183079}
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
"A tissue-specific atlas of mouse protein phosphorylation and
expression.";
Cell 143:1174-1189(2010).
[3] {ECO:0000313|Ensembl:ENSMUSP00000135572}
IDENTIFICATION.
STRAIN=C57BL/6J {ECO:0000313|Ensembl:ENSMUSP00000135572};
Ensembl;
Submitted (FEB-2012) to UniProtKB.
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|RuleBase:RU003762};
Single-pass type I membrane protein
{ECO:0000256|RuleBase:RU003762}.
-!- SIMILARITY: Belongs to the integrin alpha chain family.
{ECO:0000256|RuleBase:RU003762, ECO:0000256|SAAS:SAAS00534092}.
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EMBL; AC124566; -; NOT_ANNOTATED_CDS; Genomic_DNA.
RefSeq; XP_006508035.1; XM_006507972.3.
UniGene; Mm.334257; -.
ProteinModelPortal; H3BKX8; -.
SMR; H3BKX8; -.
MaxQB; H3BKX8; -.
Ensembl; ENSMUST00000177111; ENSMUSP00000135572; ENSMUSG00000070369.
GeneID; 381924; -.
UCSC; uc009jye.2; mouse.
CTD; 3681; -.
MGI; MGI:3578624; Itgad.
eggNOG; KOG3637; Eukaryota.
eggNOG; ENOG410XPVZ; LUCA.
GeneTree; ENSGT00760000118782; -.
Proteomes; UP000000589; Chromosome 7.
Bgee; ENSMUSG00000070369; -.
ExpressionAtlas; H3BKX8; baseline and differential.
GO; GO:0008305; C:integrin complex; IEA:InterPro.
GO; GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
GO; GO:0007229; P:integrin-mediated signaling pathway; IEA:UniProtKB-KW.
Gene3D; 2.130.10.130; -; 2.
Gene3D; 3.40.50.410; -; 1.
InterPro; IPR013517; FG-GAP.
InterPro; IPR013519; Int_alpha_beta-p.
InterPro; IPR000413; Integrin_alpha.
InterPro; IPR013649; Integrin_alpha-2.
InterPro; IPR018184; Integrin_alpha_C_CS.
InterPro; IPR028994; Integrin_alpha_N.
InterPro; IPR032695; Integrin_dom_sf.
InterPro; IPR002035; VWF_A.
InterPro; IPR036465; vWFA_dom_sf.
Pfam; PF01839; FG-GAP; 2.
Pfam; PF00357; Integrin_alpha; 1.
Pfam; PF08441; Integrin_alpha2; 1.
Pfam; PF00092; VWA; 1.
PRINTS; PR01185; INTEGRINA.
SMART; SM00191; Int_alpha; 5.
SMART; SM00327; VWA; 1.
SUPFAM; SSF53300; SSF53300; 1.
SUPFAM; SSF69179; SSF69179; 3.
PROSITE; PS51470; FG_GAP; 7.
PROSITE; PS00242; INTEGRIN_ALPHA; 1.
PROSITE; PS50234; VWFA; 1.
1: Evidence at protein level;
Cell adhesion {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00440260};
Complete proteome {ECO:0000313|Proteomes:UP000000589};
Integrin {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00494682};
Membrane {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00494657};
Proteomics identification {ECO:0000213|MaxQB:H3BKX8};
Receptor {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00440269};
Reference proteome {ECO:0000313|Proteomes:UP000000589};
Repeat {ECO:0000256|SAAS:SAAS00504086};
Signal {ECO:0000256|RuleBase:RU003762};
Transmembrane {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00494657};
Transmembrane helix {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00494657}.
SIGNAL 1 24 {ECO:0000256|RuleBase:RU003762}.
CHAIN 25 1166 {ECO:0000256|RuleBase:RU003762}.
/FTId=PRO_5001424946.
TRANSMEM 1106 1128 Helical. {ECO:0000256|RuleBase:RU003762}.
REPEAT 26 83 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
REPEAT 84 143 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
DOMAIN 157 335 VWFA. {ECO:0000259|PROSITE:PS50234}.
REPEAT 346 397 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
REPEAT 398 449 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
REPEAT 450 510 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
REPEAT 513 571 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
REPEAT 576 636 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
SEQUENCE 1166 AA; 127177 MW; 0E88BD28D8C33A21 CRC64;
MHCSAMVRGV VILLCGWALA SCHGSNLDVE KPVVFKEDAA SFGQTVVQFG GSRLVVGAPL
EAVAVNQTGQ LYDCAPATGV CQPILLHIPL EAVNMSLGLS LVADTNNSQL LACGPTAQRA
CAKNMYAKGS CLLLGSSLQF IQAIPATMPE CPGQEMDIAF LIDGSGSIDQ SDFTQMKDFV
KALMGQLAST STSFSLMQYS NILKTHFTFT EFKSSLSPQS LVDAIVQLQG LTYTASGIQK
VVKELFHSKN GARKSAKKIL IVITDGQKFR DPLEYRHVIP EAEKAGIIRY AIGVGDAFRE
PTALQELNTI GSAPSQDHVF KVGNFVALRS IQRQIQEKIF AIEGTESRSS SSFQHEMSQE
GFSSALSMDG PVLGAVGSFS WSGGAFLYPS NMRSTFINMS QENEDMRDAY LGYSTALAFW
KGVHSLILGA PRHQHTGKVV IFTQESRHWR PKSEVRGTQI GSYFGASLCS VDMDRDGSTD
LVLIGVPHYY EHTRGGQVSV CPMPGVRSRW HCGTTLHGEQ GHPWGRFGAA LTVLGDVNGD
SLADVAIGAP GEEENRGAVY IFHGASRQDI APSPSQRVTG SQLFLRLQYF GQSLSGGQDL
TQDGLVDLAV GAQGHVLLLR SLPLLKVGIS IRFAPSEVAK TVYQCWGRTP TVLEAGEATV
CLTVRKGSPD LLGDVQSSVR YDLALDPGRL ISRAIFDETK NCTLTRRKTL GLGDHCETMK
LLLPDCVEDA VTPIILRLNL SLAGDSAPSR NLRPVLAVGS QDHVTASFPF EKNCKQELLC
EGNLGVSFNF SGLQVLEVGS SPELTVTVTV WNEGEDSYGT LIKFYYPAEL SYRRVTRAQQ
PHPYPLRLAC EAEPTGQESL RSSSCSINHP IFREGAKATF MITFDVSYKA FLGDRLLLRA
SASSENNKPE TSKTAFQLEL PVKYTVYTVI SRQEDSTKHF NFSSSHGERQ KEAEHRYRVN
NLSPLTLAIS VNFWVPILLN GVAVWDVTLR SPAQGVSCVS QREPPQHSDL LTQIQGRSVL
DCAIADCLHL RCDIPSLGTL DELDFILKGN LSFGWISQTL QKKVLLLSEA EITFNTSVYS
QLPGQEAFLR AQVSTMLEEY VVYEPVFLMV FSSVGGLLLL ALITVALYKL GFFKRQYKEM
LDLPSADPDP AGQADSNHET PPHLTS


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