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Integrin alpha-D (ADB2) (CD11 antigen-like family member D) (Leukointegrin alpha D) (CD antigen CD11d)
ITAD_HUMAN Reviewed; 1161 AA.
Q13349; Q15575; Q15576;
01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
18-MAY-2010, sequence version 2.
28-MAR-2018, entry version 163.
RecName: Full=Integrin alpha-D;
AltName: Full=ADB2;
AltName: Full=CD11 antigen-like family member D;
AltName: Full=Leukointegrin alpha D;
AltName: CD_antigen=CD11d;
Flags: Precursor;
Name=ITGAD;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
TISSUE=Spleen;
PubMed=8777714; DOI=10.1016/1074-7613(95)90058-6;
Van der Vieren M., Le Trong H., Wood C.L., Moore P.F., St John T.,
Staunton D.E., Gallatin W.M.;
"A novel leukointegrin, alpha d beta 2, binds preferentially to ICAM-
3.";
Immunity 3:683-690(1995).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-235.
PubMed=10722744; DOI=10.1074/jbc.275.12.8959;
Noti J.D., Johnson A.K., Dillon J.D.;
"Structural and functional characterization of the leukocyte integrin
gene CD11d. Essential role of Sp1 and Sp3.";
J. Biol. Chem. 275:8959-8969(2000).
[3]
NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 467-536; 570-601; 632-665;
787-833 AND 909-1124.
PubMed=8666289; DOI=10.1016/0378-1119(95)00869-1;
Wong D.A., Davis E.M., LeBeau M., Springer T.A.;
"Cloning and chromosomal localization of a novel gene-encoding a human
beta 2-integrin alpha subunit.";
Gene 171:291-294(1996).
[4]
INTERACTION WITH VCAM1.
PubMed=9841932; DOI=10.1084/jem.188.11.2187;
Grayson M.H., Van der Vieren M., Sterbinsky S.A., Michael Gallatin W.,
Hoffman P.A., Staunton D.E., Bochner B.S.;
"Alphadbeta2 integrin is expressed on human eosinophils and functions
as an alternative ligand for vascular cell adhesion molecule 1 (VCAM-
1).";
J. Exp. Med. 188:2187-2191(1998).
[5]
INTERACTION WITH VCAM1.
PubMed=10438935;
Van der Vieren M., Crowe D.T., Hoekstra D., Vazeux R., Hoffman P.A.,
Grayson M.H., Bochner B.S., Gallatin W.M., Staunton D.E.;
"The leukocyte integrin alpha D beta 2 binds VCAM-1: evidence for a
binding interface between I domain and VCAM-1.";
J. Immunol. 163:1984-1990(1999).
-!- FUNCTION: Integrin alpha-D/beta-2 is a receptor for ICAM3 and
VCAM1. May play a role in the atherosclerotic process such as
clearing lipoproteins from plaques and in phagocytosis of blood-
borne pathogens, particulate matter, and senescent erythrocytes
from the blood.
-!- SUBUNIT: Heterodimer of an alpha and a beta subunit. Alpha-D
associates with beta-2.
-!- SUBCELLULAR LOCATION: Membrane; Single-pass type I membrane
protein.
-!- TISSUE SPECIFICITY: Expressed moderately on myelomonocytic cell
lines and subsets of peripheral blood leukocytes and strongly on
tissue-specialized cells, including macrophages foam cells within
atherosclerotic plaques, and on splenic red pulp macrophages.
-!- DOMAIN: The integrin I-domain (insert) is a VWFA domain. Integrins
with I-domains do not undergo protease cleavage.
-!- SIMILARITY: Belongs to the integrin alpha chain family.
{ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=AAB60634.1; Type=Miscellaneous discrepancy; Evidence={ECO:0000305};
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EMBL; U37028; AAB38547.1; -; mRNA.
EMBL; AF187881; AAF62875.1; -; Genomic_DNA.
EMBL; U40274; AAB60634.1; ALT_SEQ; Genomic_DNA.
EMBL; U40275; AAB60635.1; -; Genomic_DNA.
EMBL; U40276; AAB60636.1; -; Genomic_DNA.
EMBL; U40277; AAB60637.1; -; Genomic_DNA.
EMBL; U40279; AAB60638.1; -; Genomic_DNA.
EMBL; U40278; AAB60638.1; JOINED; Genomic_DNA.
CCDS; CCDS32438.1; -.
RefSeq; NP_001305114.1; NM_001318185.1.
RefSeq; NP_005344.2; NM_005353.2.
UniGene; Hs.679163; -.
ProteinModelPortal; Q13349; -.
SMR; Q13349; -.
BioGrid; 109887; 5.
IntAct; Q13349; 1.
STRING; 9606.ENSP00000373854; -.
iPTMnet; Q13349; -.
PhosphoSitePlus; Q13349; -.
BioMuta; ITGAD; -.
DMDM; 296434544; -.
PaxDb; Q13349; -.
PeptideAtlas; Q13349; -.
PRIDE; Q13349; -.
Ensembl; ENST00000389202; ENSP00000373854; ENSG00000156886.
GeneID; 3681; -.
KEGG; hsa:3681; -.
UCSC; uc002ebv.1; human.
CTD; 3681; -.
DisGeNET; 3681; -.
EuPathDB; HostDB:ENSG00000156886.11; -.
GeneCards; ITGAD; -.
H-InvDB; HIX0012989; -.
H-InvDB; HIX0134372; -.
HGNC; HGNC:6146; ITGAD.
HPA; HPA026786; -.
MIM; 602453; gene.
neXtProt; NX_Q13349; -.
OpenTargets; ENSG00000156886; -.
PharmGKB; PA29946; -.
eggNOG; ENOG410IPBA; Eukaryota.
eggNOG; ENOG410ZFBE; LUCA.
GeneTree; ENSGT00760000118782; -.
HOGENOM; HOG000113114; -.
HOVERGEN; HBG100530; -.
InParanoid; Q13349; -.
KO; K06594; -.
OMA; ISINFWV; -.
OrthoDB; EOG091G01BZ; -.
PhylomeDB; Q13349; -.
TreeFam; TF105391; -.
Reactome; R-HSA-216083; Integrin cell surface interactions.
SIGNOR; Q13349; -.
ChiTaRS; ITGAD; human.
GeneWiki; ITGAD; -.
GenomeRNAi; 3681; -.
PRO; PR:Q13349; -.
Proteomes; UP000005640; Chromosome 16.
Bgee; ENSG00000156886; -.
CleanEx; HS_ITGAD; -.
Genevisible; Q13349; HS.
GO; GO:0009986; C:cell surface; IC:UniProtKB.
GO; GO:0008305; C:integrin complex; TAS:UniProtKB.
GO; GO:0005886; C:plasma membrane; TAS:Reactome.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0030198; P:extracellular matrix organization; TAS:Reactome.
GO; GO:0034113; P:heterotypic cell-cell adhesion; IMP:UniProtKB.
GO; GO:0006955; P:immune response; NAS:UniProtKB.
GO; GO:0007229; P:integrin-mediated signaling pathway; IEA:UniProtKB-KW.
Gene3D; 2.130.10.130; -; 2.
Gene3D; 3.40.50.410; -; 1.
InterPro; IPR013517; FG-GAP.
InterPro; IPR013519; Int_alpha_beta-p.
InterPro; IPR000413; Integrin_alpha.
InterPro; IPR013649; Integrin_alpha-2.
InterPro; IPR018184; Integrin_alpha_C_CS.
InterPro; IPR028994; Integrin_alpha_N.
InterPro; IPR032695; Integrin_dom_sf.
InterPro; IPR002035; VWF_A.
InterPro; IPR036465; vWFA_dom_sf.
Pfam; PF01839; FG-GAP; 1.
Pfam; PF00357; Integrin_alpha; 1.
Pfam; PF08441; Integrin_alpha2; 1.
Pfam; PF00092; VWA; 1.
PRINTS; PR01185; INTEGRINA.
SMART; SM00191; Int_alpha; 5.
SMART; SM00327; VWA; 1.
SUPFAM; SSF53300; SSF53300; 1.
SUPFAM; SSF69179; SSF69179; 3.
PROSITE; PS51470; FG_GAP; 7.
PROSITE; PS00242; INTEGRIN_ALPHA; 1.
PROSITE; PS50234; VWFA; 1.
1: Evidence at protein level;
Calcium; Cell adhesion; Complete proteome; Disulfide bond;
Glycoprotein; Integrin; Magnesium; Membrane; Metal-binding; Receptor;
Reference proteome; Repeat; Signal; Transmembrane;
Transmembrane helix.
SIGNAL 1 17 {ECO:0000255}.
CHAIN 18 1161 Integrin alpha-D.
/FTId=PRO_0000016296.
TOPO_DOM 18 1099 Extracellular. {ECO:0000255}.
TRANSMEM 1100 1120 Helical. {ECO:0000255}.
TOPO_DOM 1121 1161 Cytoplasmic. {ECO:0000255}.
REPEAT 19 76 FG-GAP 1. {ECO:0000255|PROSITE-
ProRule:PRU00803}.
REPEAT 77 136 FG-GAP 2. {ECO:0000255|PROSITE-
ProRule:PRU00803}.
DOMAIN 150 332 VWFA. {ECO:0000255|PROSITE-
ProRule:PRU00219}.
REPEAT 339 390 FG-GAP 3. {ECO:0000255|PROSITE-
ProRule:PRU00803}.
REPEAT 391 442 FG-GAP 4. {ECO:0000255|PROSITE-
ProRule:PRU00803}.
REPEAT 443 503 FG-GAP 5. {ECO:0000255|PROSITE-
ProRule:PRU00803}.
REPEAT 506 564 FG-GAP 6. {ECO:0000255|PROSITE-
ProRule:PRU00803}.
REPEAT 569 629 FG-GAP 7. {ECO:0000255|PROSITE-
ProRule:PRU00803}.
CA_BIND 465 473 {ECO:0000255}.
CA_BIND 529 537 {ECO:0000255}.
CA_BIND 592 600 {ECO:0000255}.
MOTIF 1126 1130 GFFKR motif.
CARBOHYD 59 59 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 87 87 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 99 99 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 391 391 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 690 690 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 732 732 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 872 872 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 956 956 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 1045 1045 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
DISULFID 67 74 {ECO:0000250}.
DISULFID 106 124 {ECO:0000250}.
DISULFID 654 709 {ECO:0000250}.
DISULFID 768 774 {ECO:0000250}.
DISULFID 845 860 {ECO:0000250}.
DISULFID 993 1017 {ECO:0000250}.
DISULFID 1022 1027 {ECO:0000250}.
CONFLICT 499 499 G -> GQ (in Ref. 1; AAB38547).
{ECO:0000305}.
CONFLICT 824 824 L -> V (in Ref. 3; AAB60637).
{ECO:0000305}.
CONFLICT 983 983 V -> A (in Ref. 3; AAB60638).
{ECO:0000305}.
SEQUENCE 1161 AA; 126758 MW; 769D658010CE5823 CRC64;
MTFGTVLLLS VLASYHGFNL DVEEPTIFQE DAGGFGQSVV QFGGSRLVVG APLEVVAANQ
TGRLYDCAAA TGMCQPIPLH IRPEAVNMSL GLTLAASTNG SRLLACGPTL HRVCGENSYS
KGSCLLLGSR WEIIQTVPDA TPECPHQEMD IVFLIDGSGS IDQNDFNQMK GFVQAVMGQF
EGTDTLFALM QYSNLLKIHF TFTQFRTSPS QQSLVDPIVQ LKGLTFTATG ILTVVTQLFH
HKNGARKSAK KILIVITDGQ KYKDPLEYSD VIPQAEKAGI IRYAIGVGHA FQGPTARQEL
NTISSAPPQD HVFKVDNFAA LGSIQKQLQE KIYAVEGTQS RASSSFQHEM SQEGFSTALT
MDGLFLGAVG SFSWSGGAFL YPPNMSPTFI NMSQENVDMR DSYLGYSTEL ALWKGVQNLV
LGAPRYQHTG KAVIFTQVSR QWRKKAEVTG TQIGSYFGAS LCSVDVDSDG STDLILIGAP
HYYEQTRGGQ VSVCPLPRGR VQWQCDAVLR GEQGHPWGRF GAALTVLGDV NEDKLIDVAI
GAPGEQENRG AVYLFHGASE SGISPSHSQR IASSQLSPRL QYFGQALSGG QDLTQDGLMD
LAVGARGQVL LLRSLPVLKV GVAMRFSPVE VAKAVYRCWE EKPSALEAGD ATVCLTIQKS
SLDQLGDIQS SVRFDLALDP GRLTSRAIFN ETKNPTLTRR KTLGLGIHCE TLKLLLPDCV
EDVVSPIILH LNFSLVREPI PSPQNLRPVL AVGSQDLFTA SLPFEKNCGQ DGLCEGDLGV
TLSFSGLQTL TVGSSLELNV IVTVWNAGED SYGTVVSLYY PAGLSHRRVS GAQKQPHQSA
LRLACETVPT EDEGLRSSRC SVNHPIFHEG SNGTFIVTFD VSYKATLGDR MLMRASASSE
NNKASSSKAT FQLELPVKYA VYTMISRQEE STKYFNFATS DEKKMKEAEH RYRVNNLSQR
DLAISINFWV PVLLNGVAVW DVVMEAPSQS LPCVSERKPP QHSDFLTQIS RSPMLDCSIA
DCLQFRCDVP SFSVQEELDF TLKGNLSFGW VRETLQKKVL VVSVAEITFD TSVYSQLPGQ
EAFMRAQMEM VLEEDEVYNA IPIIMGSSVG ALLLLALITA TLYKLGFFKR HYKEMLEDKP
EDTATFSGDD FSCVAPNVPL S
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Pathways :
WP1003: Ovarian Infertility Genes
WP1047: TNF-alpha NF-kB Signaling Pathway
WP1120: Ovarian Infertility Genes
WP1163: TNF-alpha NF-kB Signaling Pathway
WP1209: EBV LMP1 signaling
WP1224: EBV LMP1 signaling
WP1225: estrogen signalling
WP1340: Ovarian Infertility Genes
WP1369: TNF-alpha NF-kB Signaling Pathway
WP1424: Globo Sphingolipid Metabolism
WP1434: Osteopontin Signaling
WP1487: TNF-alpha and mucus production in lung epythelium
WP1531: Vitamin D synthesis
WP1566: Citrate cycle (TCA cycle)
WP1571: EBV LMP1 signaling
WP1584: Type II diabetes mellitus
WP1614: 1- and 2-Methylnaphthalene degradation
WP1618: alpha-Linolenic acid metabolism
WP1655: Geraniol degradation
WP1772: Apoptosis Modulation and Signaling
WP1835: Interferon alpha/beta signaling
WP1904: RIG-I/MDA5 mediated induction of IFN-alpha/beta pathways
WP1963: The effect of Glucocorticoids on target gene expression
WP210: Cytoplasmic Ribosomal Proteins
WP2100: AhR pathway
Related Genes :
[ITGA6] Integrin alpha-6 (CD49 antigen-like family member F) (VLA-6) (CD antigen CD49f) [Cleaved into: Integrin alpha-6 heavy chain; Integrin alpha-6 light chain; Processed integrin alpha-6 (Alpha6p)]
[ITGA2B GP2B ITGAB] Integrin alpha-IIb (GPalpha IIb) (GPIIb) (Platelet membrane glycoprotein IIb) (CD antigen CD41) [Cleaved into: Integrin alpha-IIb heavy chain; Integrin alpha-IIb light chain, form 1; Integrin alpha-IIb light chain, form 2]
[ITGA5 FNRA] Integrin alpha-5 (CD49 antigen-like family member E) (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD antigen CD49e) [Cleaved into: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]
[ITGA7 UNQ406/PRO768] Integrin alpha-7 [Cleaved into: Integrin alpha-7 heavy chain; Integrin alpha-7 light chain; Integrin alpha-7 70 kDa form]
[Itga5] Integrin alpha-5 (CD49 antigen-like family member E) (Fibronectin receptor subunit alpha) (Integrin alpha-F) (VLA-5) (CD antigen CD49e) [Cleaved into: Integrin alpha-5 heavy chain; Integrin alpha-5 light chain]
[Itga7] Integrin alpha-7 (H36-alpha7) [Cleaved into: Integrin alpha-7 heavy chain; Integrin alpha-7 light chain; Integrin alpha-7 70 kDa form]
[ITGAE] Integrin alpha-E (HML-1 antigen) (Integrin alpha-IEL) (Mucosal lymphocyte 1 antigen) (CD antigen CD103) [Cleaved into: Integrin alpha-E light chain; Integrin alpha-E heavy chain]
[mys b[[PS]] beta integrin beta-Int beta-int beta-integrin beta-PS beta1 beta[[mys]] beta[[P]]S beta[[PS]] beta[[PS]]-integrin betaInt betamys BetaPS betaPS betaPS Int betaPS integrin BetaPS-Int betaPS-integrin betaPS1 bPS CT40473 Dmel\CG1560 EM28 integrin beta[[PS]] ItgbPS l(1)7Db l(1)7Dn l(1)93p l(1)968 l(1)DA551 l(1)EM28 l(1)G0233 l(1)G0281 l(1)mys MAb6G11 Mys nj42 olfC PS PS[[beta]] PSbeta CG1560 Dmel_CG1560] Integrin beta
[mys b[[PS]] beta integrin beta-Int beta-int beta-integrin beta-PS beta1 beta[[mys]] beta[[P]]S beta[[PS]] beta[[PS]]-integrin betaInt betamys BetaPS betaPS betaPS Int betaPS integrin BetaPS-Int betaPS-integrin betaPS1 bPS CT40473 Dmel\CG1560 EM28 integrin beta[[PS]] ItgbPS l(1)7Db l(1)7Dn l(1)93p l(1)968 l(1)DA551 l(1)EM28 l(1)G0233 l(1)G0281 l(1)mys MAb6G11 Mys nj42 olfC PS PS[[beta]] PSbeta CG1560 Dmel_CG1560] Integrin beta
[ITGAV MSK8 VNRA VTNR] Integrin alpha-V (Vitronectin receptor) (Vitronectin receptor subunit alpha) (CD antigen CD51) [Cleaved into: Integrin alpha-V heavy chain; Integrin alpha-V light chain]
[Itga8] Integrin alpha-8 [Cleaved into: Integrin alpha-8 heavy chain; Integrin alpha-8 light chain]
[ITGA3 MSK18] Integrin alpha-3 (CD49 antigen-like family member C) (FRP-2) (Galactoprotein B3) (GAPB3) (VLA-3 subunit alpha) (CD antigen CD49c) [Cleaved into: Integrin alpha-3 heavy chain; Integrin alpha-3 light chain]
[Itgav] Integrin alpha-V (Vitronectin receptor subunit alpha) (CD antigen CD51) [Cleaved into: Integrin alpha-V heavy chain; Integrin alpha-V light chain]
[Itga6] Integrin alpha-6 (CD49 antigen-like family member F) (VLA-6) (CD antigen CD49f) [Cleaved into: Integrin alpha-6 heavy chain; Integrin alpha-6 light chain]
[ITGA8] Integrin alpha-8 [Cleaved into: Integrin alpha-8 heavy chain; Integrin alpha-8 light chain]
[scb alphaPS3 Vol CG8095] Integrin alpha-PS3 (Position-specific antigen subunit alpha-3) (Protein scab) (Protein volado) [Cleaved into: Integrin alpha-PS3 heavy chain; Integrin alpha-PS3 light chain]
[if CG9623] Integrin alpha-PS2 (Position-specific antigen subunit alpha-2) (Protein inflated) [Cleaved into: Integrin alpha-PS2 heavy chain; Integrin alpha-PS2 light chain]
[Itga7] Integrin alpha-7 [Cleaved into: Integrin alpha-7 heavy chain; Integrin alpha-7 light chain]
[Itga2b] Integrin alpha-IIb (GPalpha IIb) (GPIIb) (Platelet membrane glycoprotein IIb) (CD antigen CD41) [Cleaved into: Integrin alpha-IIb heavy chain; Integrin alpha-IIb light chain]
[mew CG1771] Integrin alpha-PS1 (Position-specific antigen subunit alpha-1) (Protein multiple edematous wings) [Cleaved into: Integrin alpha-PS1 heavy chain; Integrin alpha-PS1 light chain]
[Itga3] Integrin alpha-3 (CD49 antigen-like family member C) (Galactoprotein B3) (GAPB3) (VLA-3 subunit alpha) (CD antigen CD49c) [Cleaved into: Integrin alpha-3 heavy chain; Integrin alpha-3 light chain]
[ITGA3] Integrin alpha-3 (CD49 antigen-like family member C) (Galactoprotein B3) (GAPB3) (VLA-3 subunit alpha) (CD antigen CD49c) [Cleaved into: Integrin alpha-3 heavy chain; Integrin alpha-3 light chain]
[Itgae] Integrin alpha-E (Integrin alpha M290) (CD antigen CD103) [Cleaved into: Integrin alpha-E light chain; Integrin alpha-E heavy chain]
[ITGB1BP1 ICAP1] Integrin beta-1-binding protein 1 (Integrin cytoplasmic domain-associated protein 1) (ICAP-1)
[ITGB1] Integrin beta-1 (Fibronectin receptor subunit beta) (Integrin subunit beta-1) (VLA-4 subunit beta) (CD antigen CD29)
[CIB1 CIB KIP PRKDCIP] Calcium and integrin-binding protein 1 (CIB) (Calcium- and integrin-binding protein) (CIBP) (Calmyrin) (DNA-PKcs-interacting protein) (Kinase-interacting protein) (KIP) (SNK-interacting protein 2-28) (SIP2-28)
[Itgb7] Integrin beta-7 (Integrin beta-P) (M290 IEL antigen)
[ITGA4 CD49D] Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (VLA-4 subunit alpha) (CD antigen CD49d)
[ITGA9] Integrin alpha-9 (Integrin alpha-RLC)
[Itga4] Integrin alpha-4 (CD49 antigen-like family member D) (Integrin alpha-IV) (Lymphocyte Peyer patch adhesion molecules subunit alpha) (LPAM subunit alpha) (VLA-4 subunit alpha) (CD antigen CD49d)
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