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Integrin alpha-L

 Q30KI7_PIG              Unreviewed;      1172 AA.
Q30KI7;
06-DEC-2005, integrated into UniProtKB/TrEMBL.
06-DEC-2005, sequence version 1.
28-FEB-2018, entry version 77.
SubName: Full=Integrin alpha-L {ECO:0000313|EMBL:AAY68305.1};
Name=ITGAL {ECO:0000313|EMBL:AAY68305.1};
Sus scrofa (Pig).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae;
Sus.
NCBI_TaxID=9823 {ECO:0000313|EMBL:AAY68305.1};
[1] {ECO:0000313|EMBL:AAY68305.1}
NUCLEOTIDE SEQUENCE.
TISSUE=Spleen {ECO:0000313|EMBL:AAY68305.1};
PubMed=16216120; DOI=10.1186/1746-6148-1-5;
Vanden Bergh P.G., Fett T., Zecchinon L.L., Thomas A.V.,
Desmecht D.J.;
"The CD11a partner in Sus scrofa lymphocyte function-associated
antigen-1 (LFA-1): mRNA cloning, structure analysis and comparison
with mammalian homologues.";
BMC Vet. Res. 1:5-5(2005).
[2] {ECO:0000313|EMBL:AAY68305.1}
NUCLEOTIDE SEQUENCE.
TISSUE=Spleen {ECO:0000313|EMBL:AAY68305.1};
Vanden Bergh P.G.A.C., Fett T., Zecchinon L.L.M., Thomas A.V.T.,
Desmecht D.J.M.;
Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|RuleBase:RU003762};
Single-pass type I membrane protein
{ECO:0000256|RuleBase:RU003762}.
-!- SIMILARITY: Belongs to the integrin alpha chain family.
{ECO:0000256|RuleBase:RU003762, ECO:0000256|SAAS:SAAS00534092}.
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EMBL; DQ013285; AAY68305.1; -; mRNA.
UniGene; Ssc.32988; -.
ProteinModelPortal; Q30KI7; -.
PRIDE; Q30KI7; -.
eggNOG; KOG3637; Eukaryota.
eggNOG; ENOG410XPVZ; LUCA.
HOVERGEN; HBG006188; -.
GO; GO:0008305; C:integrin complex; IEA:InterPro.
GO; GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
GO; GO:0007229; P:integrin-mediated signaling pathway; IEA:UniProtKB-KW.
Gene3D; 2.130.10.130; -; 2.
Gene3D; 3.40.50.410; -; 1.
InterPro; IPR013517; FG-GAP.
InterPro; IPR013519; Int_alpha_beta-p.
InterPro; IPR000413; Integrin_alpha.
InterPro; IPR013649; Integrin_alpha-2.
InterPro; IPR018184; Integrin_alpha_C_CS.
InterPro; IPR028994; Integrin_alpha_N.
InterPro; IPR032695; Integrin_dom_sf.
InterPro; IPR002035; VWF_A.
InterPro; IPR036465; vWFA_dom_sf.
Pfam; PF01839; FG-GAP; 1.
Pfam; PF00357; Integrin_alpha; 1.
Pfam; PF08441; Integrin_alpha2; 1.
Pfam; PF00092; VWA; 1.
PRINTS; PR01185; INTEGRINA.
SMART; SM00191; Int_alpha; 5.
SMART; SM00327; VWA; 1.
SUPFAM; SSF53300; SSF53300; 1.
SUPFAM; SSF69179; SSF69179; 2.
PROSITE; PS51470; FG_GAP; 7.
PROSITE; PS00242; INTEGRIN_ALPHA; 1.
PROSITE; PS50234; VWFA; 1.
2: Evidence at transcript level;
Cell adhesion {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00440260};
Integrin {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00494682, ECO:0000313|EMBL:AAY68305.1};
Membrane {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00494657};
Receptor {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00440269};
Repeat {ECO:0000256|SAAS:SAAS00504086};
Signal {ECO:0000256|RuleBase:RU003762};
Transmembrane {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00494657};
Transmembrane helix {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00494657}.
SIGNAL 1 23 {ECO:0000256|RuleBase:RU003762}.
CHAIN 24 1172 {ECO:0000256|RuleBase:RU003762}.
/FTId=PRO_5001425792.
TRANSMEM 1088 1110 Helical. {ECO:0000256|RuleBase:RU003762}.
REPEAT 29 80 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
REPEAT 81 139 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
DOMAIN 154 325 VWFA. {ECO:0000259|PROSITE:PS50234}.
REPEAT 336 387 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
REPEAT 390 443 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
REPEAT 444 504 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
REPEAT 505 561 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
REPEAT 565 625 FG-GAP. {ECO:0000256|PROSITE-
ProRule:PRU00803}.
SEQUENCE 1172 AA; 129053 MW; 45FAC173A92BFBA0 CRC64;
MNSCIIVMRL LLSGPFLFAA AWSYNLDVRH VQHFSFPLAG RHFGYRVLQV GNGVFVGAPG
EGNSMGSLYQ CQPDNGQCMQ VTPSGSNYTS KYLGMTLATD PTTNSLLACD PGLSRTCDQN
IYLSGLCYLF HQGLGGPVLQ GRPGYQECIK GNVDLVFLFD GSNSLSPEEF RKIVDFMKDV
MKKLSNTSYQ FAAVQFSTTY RTEFTFLDYA KQKNPDVLLN NVKHMRELTN TFGAIDYVAS
HVFQQKLGAR PDATKVLIII TDGEATDGKD ISSAKDIVRY IIGVGKHFKT TKSQETLHQF
ASKPVEEFVK ILDTFEKLKD LFTELQKKIY DIEGTSKQDL TSFDMELSSS GISADLSKGH
GIVGAVGAED WAGGFLDLKA DLQGDTFVGN VPLTPEVRAG YLGYTVTWLP SRGTMSLLAA
GAPRYQHVGR VLLFQKPEDK GPWRQIQKID GTQIGSYFGG ELCGVDLNQD GETELLLIGV
PLFYGEQRGG RVFVYQRKQL EFQMISELHG DPGYLLGRFG AAITALMDLN GDGLTDVAVG
APLEEQGAVY IFNGKPGGLS AWPSQRIAGA QMFSEIRWFG RSIHGVKDLG GDGLADVAVG
AEGQVIVLSS RPVVDINTTI DFSPAEIPMH EVECSYSTSN QKKEGVNLIV CFQVKSLISQ
FQGPLVANLT YTLQLDGHRT RSRGLFPGGT HELSGNTAVT SDQSCIRFKF HIPVCVQDLI
SPINVSLNYS LWEEEGTSRD QRADKDIQPI LRPSAHSETR EIPFEKNCGE DKKCEADLRV
AFSPESSKVL RLTPSTSLAV RLTLQNVKED AYWVHLSLSF PWGLSFRKVE VLKPHSQMPV
SCEELLEETS LQSRAVSCNV SSPIFKANSS VDIQVMFDTL SNSSWEDLVE LKADVRCNNE
DTGHLIDNWA ATSIPVLYPL NILTKDQENS TLYISFTPKG PKTHHVKHSY QVKIQPSVYD
HNMPALEALV GVPQPHPKGP ITHKWSVQME PPVTCHQEEV ESLPSVAEPL CQLGAQFRCP
VVFKQEILVQ VIGTVELVGD IEASSVFSLC SSLAISFNSS KHFHLYGSNA SLAQVNMKVD
IIYEKDMLYL YVLSSIGGLL LLLLIFLVLY KVGFFKRNLK EQMEATEEAS NDTPEEDSGR
PASGEDARDP GCLEPLHNDN TQDAVGATEA QA


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