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Integrin alpha-L

 Q30KI8_PIG              Unreviewed;      1173 AA.
Q30KI8;
06-DEC-2005, integrated into UniProtKB/TrEMBL.
06-DEC-2005, sequence version 1.
23-MAY-2018, entry version 98.
SubName: Full=Integrin alpha-L {ECO:0000313|EMBL:AAY68304.1};
Name=ITGAL {ECO:0000313|EMBL:AAY68304.1};
Sus scrofa (Pig).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae;
Sus.
NCBI_TaxID=9823 {ECO:0000313|EMBL:AAY68304.1};
[1] {ECO:0000313|EMBL:AAY68304.1}
NUCLEOTIDE SEQUENCE.
TISSUE=Spleen {ECO:0000313|EMBL:AAY68304.1};
PubMed=16216120; DOI=10.1186/1746-6148-1-5;
Vanden Bergh P.G., Fett T., Zecchinon L.L., Thomas A.V.,
Desmecht D.J.;
"The CD11a partner in Sus scrofa lymphocyte function-associated
antigen-1 (LFA-1): mRNA cloning, structure analysis and comparison
with mammalian homologues.";
BMC Vet. Res. 1:5-5(2005).
[2] {ECO:0000313|EMBL:AAY68304.1}
NUCLEOTIDE SEQUENCE.
TISSUE=Spleen {ECO:0000313|EMBL:AAY68304.1};
Vanden Bergh P.G.A.C., Fett T., Zecchinon L.L.M., Thomas A.V.T.,
Desmecht D.J.M.;
Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|RuleBase:RU003762};
Single-pass type I membrane protein
{ECO:0000256|RuleBase:RU003762}.
-!- SIMILARITY: Belongs to the integrin alpha chain family.
{ECO:0000256|RuleBase:RU003762, ECO:0000256|SAAS:SAAS00534092}.
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EMBL; DQ013284; AAY68304.1; -; mRNA.
RefSeq; NP_001038073.1; NM_001044608.1.
UniGene; Ssc.32988; -.
PeptideAtlas; Q30KI8; -.
PRIDE; Q30KI8; -.
GeneID; 733681; -.
KEGG; ssc:733681; -.
CTD; 3683; -.
eggNOG; KOG3637; Eukaryota.
eggNOG; ENOG410XPVZ; LUCA.
HOGENOM; HOG000113114; -.
HOVERGEN; HBG006188; -.
KO; K05718; -.
Reactome; R-SSC-198933; Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell.
Reactome; R-SSC-202733; Cell surface interactions at the vascular wall.
Reactome; R-SSC-216083; Integrin cell surface interactions.
Reactome; R-SSC-6798695; Neutrophil degranulation.
Bgee; ENSSSCG00000007797; -.
ExpressionAtlas; Q30KI8; baseline.
GO; GO:0008305; C:integrin complex; IEA:InterPro.
GO; GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
GO; GO:0007229; P:integrin-mediated signaling pathway; IEA:UniProtKB-KW.
Gene3D; 2.130.10.130; -; 2.
Gene3D; 3.40.50.410; -; 1.
InterPro; IPR013517; FG-GAP.
InterPro; IPR013519; Int_alpha_beta-p.
InterPro; IPR000413; Integrin_alpha.
InterPro; IPR013649; Integrin_alpha-2.
InterPro; IPR018184; Integrin_alpha_C_CS.
InterPro; IPR028994; Integrin_alpha_N.
InterPro; IPR032695; Integrin_dom_sf.
InterPro; IPR002035; VWF_A.
InterPro; IPR036465; vWFA_dom_sf.
Pfam; PF01839; FG-GAP; 1.
Pfam; PF00357; Integrin_alpha; 1.
Pfam; PF08441; Integrin_alpha2; 1.
Pfam; PF00092; VWA; 1.
PRINTS; PR01185; INTEGRINA.
SMART; SM00191; Int_alpha; 5.
SMART; SM00327; VWA; 1.
SUPFAM; SSF53300; SSF53300; 1.
SUPFAM; SSF69179; SSF69179; 2.
PROSITE; PS51470; FG_GAP; 7.
PROSITE; PS00242; INTEGRIN_ALPHA; 1.
PROSITE; PS50234; VWFA; 1.
2: Evidence at transcript level;
Cell adhesion {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00440260};
Integrin {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00494682, ECO:0000313|EMBL:AAY68304.1};
Membrane {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00494657};
Receptor {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00440269};
Repeat {ECO:0000256|SAAS:SAAS00504086};
Signal {ECO:0000256|RuleBase:RU003762};
Transmembrane {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00494657};
Transmembrane helix {ECO:0000256|RuleBase:RU003762,
ECO:0000256|SAAS:SAAS00494657}.
SIGNAL 1 23 {ECO:0000256|RuleBase:RU003762}.
CHAIN 24 1173 {ECO:0000256|RuleBase:RU003762}.
/FTId=PRO_5011323767.
TRANSMEM 1089 1111 Helical. {ECO:0000256|RuleBase:RU003762}.
SEQUENCE 1173 AA; 129181 MW; 65835F848AC59DAE CRC64;
MNSCIIVMRL LLSGPFLFAA AWSYNLDVRH VQHFSFPLAG RHFGYRVLQV GNGVFVGAPG
EGNSMGSLYQ CQPDNGQCMQ VTPSGSNYTS KYLGMTLATD PTTNSLLACD PGLSRTCDQN
IYLSGLCYLF HQGLGGPVLQ GRPGYQECIK GNVDLVFLFD GSNSLSPEEF RKIVDFMKDV
MKKLSNTSYQ FAAVQFSTTY RTEFTFLDYA KQKNPDVLLN NVKHMRELTN TFGAIDYVAS
HVFQQKLGAR PDATKVLIII TDGEATDGKD ISSAKDIVRY IIGVGKHFKT TKSQETLHQF
ASKPVEEFVK ILDTFEKLKD LFTELQKKIY DIEGTSKQDL TSFDMELSSS GISADLSKGH
GIVGAVGAED WAGGFLDLKA DLQGDTFVGN VPLTPEVRAG YLGYTVTWLP SRGTMSLLAA
GAPRYQHVGR VLLFQKPEDK GPWRQIQKID GTQIGSYFGG ELCGVDLNQD GETELLLIGV
PLFYGEQRGG RVFVYQRKQL EFQMISELHG DPGYLLGRFG AAITALMDLN GDGLTDVAVG
APLEEQGAVY IFNGKPGGLS AWPSQRIAGA QMFSEIRWFG RSIHGVKDLG GDGLADVAVG
AEGQVIVLSS RPVVDINTTI DFSPAEIPMH EVECSYSTSN QKKEGVNLIV CFQVKSLISQ
FQGPLVANLT YTLQLDGHRT RSRGLFPGGT HELSGNTAVT SDQSCIRFKF HIPVCVQDLI
SPINVSLNYS LWEEEGTSRD QRAQDKDIQP ILRPSAHSET REIPFEKNCG EDKKCEADLR
VAFSPESSKV LRLTPSTSLA VRLTLQNVKE DAYWVHLSLS FPWGLSFRKV EVLKPHSQMP
VSCEELLEET SLQSRAVSCN VSSPIFKANS SVDIQVMFDT LSNSSWEDLV ELKADVRCNN
EDTGHLIDNW AATSIPVLYP LNILTKDQEN STLYISFTPK GPKTHHVKHS YQVKIQPSVY
DHNMPALEAL VGVPQPHPKG PITHKWSVQM EPPVTCHQEE VESLPSVAEP LCQLGAQFRC
PVVFKQEILV QVIGTVELVG DIEASSVFSL CSSLAISFNS SKHFHLYGSN ASLAQVNMKV
DIIYEKDMLY LYVLSSIGGL LLLLLIFLVL YKVGFFKRNL KEQMEATEEA SNDTPEEDSG
RPASGEDARD PGCLEPLHND NTQDAVGATE AQA


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