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Integrin beta

 Q8R2H2_RAT              Unreviewed;       787 AA.
Q8R2H2;
01-JUN-2002, integrated into UniProtKB/TrEMBL.
01-JUN-2002, sequence version 1.
20-DEC-2017, entry version 114.
RecName: Full=Integrin beta {ECO:0000256|RuleBase:RU000633};
Name=Itgb3 {ECO:0000313|RGD:628868};
Synonyms=itgb3 {ECO:0000313|EMBL:CAD29521.1};
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116 {ECO:0000313|EMBL:CAD29521.1};
[1] {ECO:0000313|EMBL:CAD29521.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Wistar {ECO:0000313|EMBL:CAD29521.1};
TISSUE=Kidney {ECO:0000313|EMBL:CAD29521.1};
Stephan C., Hamacher M.;
"Cloning of the rat integrin beta3 subunit.";
Submitted (APR-2002) to the EMBL/GenBank/DDBJ databases.
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|RuleBase:RU000633};
Single-pass type I membrane protein
{ECO:0000256|RuleBase:RU000633}.
-!- SIMILARITY: Belongs to the integrin beta chain family.
{ECO:0000256|RuleBase:RU000633}.
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EMBL; AJ440952; CAD29521.1; -; mRNA.
PIR; PN0509; PN0509.
RefSeq; NP_714942.1; NM_153720.1.
UniGene; Rn.229225; -.
ProteinModelPortal; Q8R2H2; -.
CORUM; Q8R2H2; -.
PRIDE; Q8R2H2; -.
GeneID; 29302; -.
KEGG; rno:29302; -.
CTD; 3690; -.
RGD; 628868; Itgb3.
HOVERGEN; HBG006190; -.
KO; K06493; -.
PhylomeDB; Q8R2H2; -.
Genevisible; Q8R2H2; RN.
GO; GO:0071133; C:alpha9-beta1 integrin-ADAM8 complex; ISO:RGD.
GO; GO:0035867; C:alphav-beta3 integrin-IGF-1-IGF1R complex; ISO:RGD.
GO; GO:0016324; C:apical plasma membrane; IDA:RGD.
GO; GO:0009986; C:cell surface; IDA:RGD.
GO; GO:0009897; C:external side of plasma membrane; ISO:RGD.
GO; GO:0070062; C:extracellular exosome; ISO:RGD.
GO; GO:0031527; C:filopodium membrane; ISO:RGD.
GO; GO:0005925; C:focal adhesion; ISO:RGD.
GO; GO:0034683; C:integrin alphav-beta3 complex; ISO:RGD.
GO; GO:0008305; C:integrin complex; IDA:RGD.
GO; GO:0031258; C:lamellipodium membrane; ISO:RGD.
GO; GO:0042470; C:melanosome; ISO:RGD.
GO; GO:0016020; C:membrane; IDA:RGD.
GO; GO:0031528; C:microvillus membrane; ISO:RGD.
GO; GO:0005634; C:nucleus; ISO:RGD.
GO; GO:0005886; C:plasma membrane; ISO:RGD.
GO; GO:0043235; C:receptor complex; ISO:RGD.
GO; GO:0032587; C:ruffle membrane; ISO:RGD.
GO; GO:0050839; F:cell adhesion molecule binding; ISO:RGD.
GO; GO:0019899; F:enzyme binding; ISO:RGD.
GO; GO:0050840; F:extracellular matrix binding; ISO:RGD.
GO; GO:0001968; F:fibronectin binding; ISO:RGD.
GO; GO:0042802; F:identical protein binding; ISO:RGD.
GO; GO:0005178; F:integrin binding; ISO:RGD.
GO; GO:0042277; F:peptide binding; IDA:RGD.
GO; GO:0002020; F:protease binding; ISO:RGD.
GO; GO:0003756; F:protein disulfide isomerase activity; ISO:RGD.
GO; GO:0004872; F:receptor activity; IEA:InterPro.
GO; GO:0043184; F:vascular endothelial growth factor receptor 2 binding; ISO:RGD.
GO; GO:0032147; P:activation of protein kinase activity; ISO:RGD.
GO; GO:0060055; P:angiogenesis involved in wound healing; IEA:InterPro.
GO; GO:0038027; P:apolipoprotein A-I-mediated signaling pathway; ISO:RGD.
GO; GO:0007155; P:cell adhesion; IDA:RGD.
GO; GO:0033627; P:cell adhesion mediated by integrin; ISO:RGD.
GO; GO:0016049; P:cell growth; ISO:RGD.
GO; GO:0016477; P:cell migration; ISO:RGD.
GO; GO:0007160; P:cell-matrix adhesion; ISO:RGD.
GO; GO:0031589; P:cell-substrate adhesion; ISO:RGD.
GO; GO:0007044; P:cell-substrate junction assembly; ISO:RGD.
GO; GO:0006874; P:cellular calcium ion homeostasis; IDA:RGD.
GO; GO:0035690; P:cellular response to drug; IEP:RGD.
GO; GO:1990314; P:cellular response to insulin-like growth factor stimulus; IEP:RGD.
GO; GO:0071260; P:cellular response to mechanical stimulus; IEP:RGD.
GO; GO:0036120; P:cellular response to platelet-derived growth factor stimulus; ISO:RGD.
GO; GO:0007566; P:embryo implantation; IEP:RGD.
GO; GO:0034113; P:heterotypic cell-cell adhesion; ISO:RGD.
GO; GO:0007229; P:integrin-mediated signaling pathway; IDA:RGD.
GO; GO:0048333; P:mesodermal cell differentiation; ISO:RGD.
GO; GO:0050919; P:negative chemotaxis; ISO:RGD.
GO; GO:0060548; P:negative regulation of cell death; IMP:RGD.
GO; GO:0010888; P:negative regulation of lipid storage; ISO:RGD.
GO; GO:0032369; P:negative regulation of lipid transport; ISO:RGD.
GO; GO:0050748; P:negative regulation of lipoprotein metabolic process; ISO:RGD.
GO; GO:0045715; P:negative regulation of low-density lipoprotein particle receptor biosynthetic process; ISO:RGD.
GO; GO:0010745; P:negative regulation of macrophage derived foam cell differentiation; ISO:RGD.
GO; GO:0030168; P:platelet activation; ISO:RGD.
GO; GO:0070527; P:platelet aggregation; IMP:RGD.
GO; GO:0048008; P:platelet-derived growth factor receptor signaling pathway; ISO:RGD.
GO; GO:1900731; P:positive regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway; IMP:RGD.
GO; GO:0045766; P:positive regulation of angiogenesis; IMP:RGD.
GO; GO:0045780; P:positive regulation of bone resorption; IMP:RGD.
GO; GO:0033630; P:positive regulation of cell adhesion mediated by integrin; IMP:RGD.
GO; GO:0030335; P:positive regulation of cell migration; ISO:RGD.
GO; GO:0001954; P:positive regulation of cell-matrix adhesion; ISO:RGD.
GO; GO:0010595; P:positive regulation of endothelial cell migration; ISO:RGD.
GO; GO:0001938; P:positive regulation of endothelial cell proliferation; ISO:RGD.
GO; GO:0070374; P:positive regulation of ERK1 and ERK2 cascade; IMP:RGD.
GO; GO:0010763; P:positive regulation of fibroblast migration; IMP:RGD.
GO; GO:0048146; P:positive regulation of fibroblast proliferation; ISO:RGD.
GO; GO:0010628; P:positive regulation of gene expression; ISO:RGD.
GO; GO:0072126; P:positive regulation of glomerular mesangial cell proliferation; IMP:RGD.
GO; GO:0002687; P:positive regulation of leukocyte migration; IMP:RGD.
GO; GO:0043410; P:positive regulation of MAPK cascade; IDA:RGD.
GO; GO:0033690; P:positive regulation of osteoblast proliferation; ISO:RGD.
GO; GO:0050731; P:positive regulation of peptidyl-tyrosine phosphorylation; ISO:RGD.
GO; GO:0014911; P:positive regulation of smooth muscle cell migration; IMP:RGD.
GO; GO:0048661; P:positive regulation of smooth muscle cell proliferation; IMP:RGD.
GO; GO:1900026; P:positive regulation of substrate adhesion-dependent cell spreading; ISO:RGD.
GO; GO:2000406; P:positive regulation of T cell migration; ISO:RGD.
GO; GO:0032956; P:regulation of actin cytoskeleton organization; ISO:RGD.
GO; GO:0030334; P:regulation of cell migration; ISO:RGD.
GO; GO:1903053; P:regulation of extracellular matrix organization; ISO:RGD.
GO; GO:0008277; P:regulation of G-protein coupled receptor protein signaling pathway; IMP:RGD.
GO; GO:0061097; P:regulation of protein tyrosine kinase activity; ISO:RGD.
GO; GO:0051279; P:regulation of release of sequestered calcium ion into cytosol; IDA:RGD.
GO; GO:0014823; P:response to activity; IEP:RGD.
GO; GO:0036119; P:response to platelet-derived growth factor; IEP:RGD.
GO; GO:0009314; P:response to radiation; IEP:RGD.
GO; GO:0014909; P:smooth muscle cell migration; ISO:RGD.
GO; GO:0034446; P:substrate adhesion-dependent cell spreading; ISO:RGD.
GO; GO:0046718; P:viral entry into host cell; ISO:RGD.
Gene3D; 1.20.5.100; -; 1.
Gene3D; 1.20.5.630; -; 1.
InterPro; IPR021157; Cyt_c1_TM_anchor_C.
InterPro; IPR013111; EGF_extracell.
InterPro; IPR027068; Integrin_beta-3.
InterPro; IPR033760; Integrin_beta_N.
InterPro; IPR015812; Integrin_bsu.
InterPro; IPR014836; Integrin_bsu_cyt_dom.
InterPro; IPR037076; Integrin_bsu_cyt_dom_sf.
InterPro; IPR012896; Integrin_bsu_tail.
InterPro; IPR036349; Integrin_bsu_tail_dom_sf.
InterPro; IPR002369; Integrin_bsu_VWA.
InterPro; IPR032695; Integrin_dom_sf.
InterPro; IPR016201; PSI.
InterPro; IPR036465; vWFA_dom_sf.
PANTHER; PTHR10082; PTHR10082; 1.
PANTHER; PTHR10082:SF25; PTHR10082:SF25; 1.
Pfam; PF07974; EGF_2; 2.
Pfam; PF08725; Integrin_b_cyt; 1.
Pfam; PF07965; Integrin_B_tail; 1.
Pfam; PF00362; Integrin_beta; 1.
Pfam; PF17205; PSI_integrin; 1.
PIRSF; PIRSF002512; Integrin_B; 1.
PRINTS; PR01186; INTEGRINB.
SMART; SM00187; INB; 1.
SMART; SM01241; Integrin_b_cyt; 1.
SMART; SM01242; Integrin_B_tail; 1.
SMART; SM00423; PSI; 1.
SUPFAM; SSF53300; SSF53300; 1.
SUPFAM; SSF69179; SSF69179; 1.
SUPFAM; SSF69687; SSF69687; 1.
PROSITE; PS00243; INTEGRIN_BETA; 1.
2: Evidence at transcript level;
Cell adhesion {ECO:0000256|RuleBase:RU000633};
Disulfide bond {ECO:0000256|PIRSR:PIRSR002512-1};
Integrin {ECO:0000256|RuleBase:RU000633,
ECO:0000256|SAAS:SAAS00895071, ECO:0000313|EMBL:CAD29521.1};
Membrane {ECO:0000256|SAAS:SAAS00895947, ECO:0000256|SAM:Phobius};
Signal {ECO:0000256|SAM:SignalP};
Transmembrane {ECO:0000256|SAAS:SAAS00895947,
ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAAS:SAAS00895947,
ECO:0000256|SAM:Phobius}.
SIGNAL 1 25 {ECO:0000256|SAM:SignalP}.
CHAIN 26 787 Integrin beta. {ECO:0000256|SAM:SignalP}.
/FTId=PRO_5004312362.
TRANSMEM 718 740 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 29 75 PSI. {ECO:0000259|SMART:SM00423}.
DOMAIN 37 460 INB. {ECO:0000259|SMART:SM00187}.
DOMAIN 633 717 Integrin_B_tail.
{ECO:0000259|SMART:SM01242}.
DOMAIN 741 787 Integrin_b_cyt.
{ECO:0000259|SMART:SM01241}.
DISULFID 30 460 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 38 48 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 41 74 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 51 63 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 202 209 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 257 298 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 399 411 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 431 680 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 458 462 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 473 485 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 482 520 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 487 496 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 498 511 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 526 531 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 528 561 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 533 546 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 548 553 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 567 572 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 569 600 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 574 583 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 585 592 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 606 611 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 608 656 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 613 623 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 626 629 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 633 642 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 639 712 {ECO:0000256|PIRSR:PIRSR002512-1}.
DISULFID 660 688 {ECO:0000256|PIRSR:PIRSR002512-1}.
SEQUENCE 787 AA; 86930 MW; C67826118411FE95 CRC64;
MRTRRPGQLW ATLLALGALA GVVVGESNIC TTRGVNSCQQ CLAVSPVCAW CSDESLPQNS
PRCNLKKNLL KDKCSPESIE FPVSEAQILE ALPLSSKGSG DSAQITQVSP QRIALRLRPD
DSKIFSLQVR QVEDYPVDIY YLMDLSFSMK DDLSSIQTLG TKLASQMRKL TSNLRIGFGA
FVDKPVSPYM FISPPQAIKN PCYTMKSTCL PMFGYKHVLT LTDQVTRFND EVKKQSVSRN
RDAPEGGFDA IMQATVCDEK IGWRNDASHL LVFTTDAKTH IALDGRLAGI VLPNDGRCHI
GPDNHYSAST TMDYPSLGLM TEKLSQKNIN LIFAVTENVV SLYQNYSELI PGTTVGVLSD
DSSNVLQLIV DAYGKIRSKV ELEVRDLPEE LSLSFNATCL NNEVIPGLKS CVGLKIGDTV
SFSIEAKVRG CPQQKEQSFT IKPVGFKDSL TVQVTFDCDC DCQAFAQPLS PRCNNGNGTF
ECGVCRCDQG WLGSMCECSE EDYRPSQQEE CSPKEGQPIC SQRGECLCGQ CVCHSSDFGK
ITGKYCECDD FSCVRYKGEM CSGHGQCNCG DCVCDSDWTG YYCNCTTRTD TCMSTNGLLC
SGRGNCECGS CVCVQPGSYG DTCEKCPTCP DACSFKKDCV ECKKFNRGKL HEENNCNRFC
RDDIELVKEL TDTGKNAVNC TYKNEDDCVV RFQYYEDSSG RAVLYVVEEP ECPKGPDILV
VLLSVMGAIL LIGLATLLIW KLLITIHDRK EFAKFEEERA RAKWDTANNP LYKEATSTFT
NITYRGT


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