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Interferon-related developmental regulator 1 (IRPR) (Nerve growth factor-inducible protein PC4)

 IFRD1_RAT               Reviewed;         449 AA.
P20695;
01-FEB-1991, integrated into UniProtKB/Swiss-Prot.
01-FEB-1991, sequence version 1.
07-NOV-2018, entry version 95.
RecName: Full=Interferon-related developmental regulator 1;
AltName: Full=IRPR;
AltName: Full=Nerve growth factor-inducible protein PC4;
Name=Ifrd1; Synonyms=Pc4;
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=2467301; DOI=10.1073/pnas.86.6.2088;
Tirone F., Shooter E.M.;
"Early gene regulation by nerve growth factor in PC12 cells: induction
of an interferon-related gene.";
Proc. Natl. Acad. Sci. U.S.A. 86:2088-2092(1989).
[2]
SUBCELLULAR LOCATION.
PubMed=8028043; DOI=10.1002/jnr.490370514;
Guardavaccaro D., Montagnoli A., Ciotti M.T., Gatti A., Lotti L.,
di Lazzaro C., Torrisi M.R., Tirone F.;
"Nerve growth factor regulates the subcellular localization of the
nerve growth factor-inducible protein PC4 in PC12 cells.";
J. Neurosci. Res. 37:660-674(1994).
-!- FUNCTION: Probably participates in neurogenesis. Could play a role
in regulating gene activity in the proliferative and/or
differentiative pathways induced by NGF.
-!- SUBUNIT: Interacts with PSIP1/LEDGF. {ECO:0000250}.
-!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:8028043}. Cell
membrane {ECO:0000269|PubMed:8028043}. Nucleus
{ECO:0000269|PubMed:8028043}. Note=Presents a NGF-dependent
pattern of intracellular localization. With increasing amounts of
NGF and besides being expressed in the cytoplasm, it is also
localized in the plasma membrane (inner side) at the onset of NGF-
induced differentiation, from where it disappears to reappear in
the nuclei of differentiated cells.
-!- TISSUE SPECIFICITY: Expressed at high levels in the embryonic
brain in the period related to neuroblast proliferation and
differentiation.
-!- DEVELOPMENTAL STAGE: Activated at the onset of neuronal
differentiation.
-!- INDUCTION: By nerve growth factor.
-!- SIMILARITY: Belongs to the IFRD family. {ECO:0000305}.
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EMBL; J04511; AAC28946.1; -; mRNA.
PIR; A30303; A30303.
RefSeq; NP_062115.1; NM_019242.1.
UniGene; Rn.3723; -.
ProteinModelPortal; P20695; -.
SMR; P20695; -.
STRING; 10116.ENSRNOP00000067730; -.
PaxDb; P20695; -.
PRIDE; P20695; -.
GeneID; 29596; -.
KEGG; rno:29596; -.
CTD; 3475; -.
RGD; 2867; Ifrd1.
eggNOG; KOG2842; Eukaryota.
eggNOG; ENOG410XSIZ; LUCA.
HOVERGEN; HBG052089; -.
InParanoid; P20695; -.
PhylomeDB; P20695; -.
PRO; PR:P20695; -.
Proteomes; UP000002494; Unplaced.
GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO; GO:0005634; C:nucleus; IBA:GO_Central.
GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO; GO:0061629; F:RNA polymerase II sequence-specific DNA-binding transcription factor binding; IPI:MGI.
GO; GO:0014009; P:glial cell proliferation; IEP:RGD.
GO; GO:0042692; P:muscle cell differentiation; TAS:RGD.
GO; GO:0007405; P:neuroblast proliferation; IEP:RGD.
GO; GO:0051091; P:positive regulation of DNA-binding transcription factor activity; IGI:MGI.
GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IGI:MGI.
InterPro; IPR016024; ARM-type_fold.
InterPro; IPR039777; IFRD.
InterPro; IPR006921; Interferon-rel_develop_reg_C.
InterPro; IPR007701; Interferon-rel_develop_reg_N.
PANTHER; PTHR12354; PTHR12354; 1.
Pfam; PF05004; IFRD; 1.
Pfam; PF04836; IFRD_C; 1.
SUPFAM; SSF48371; SSF48371; 1.
2: Evidence at transcript level;
Cell membrane; Complete proteome; Cytoplasm; Developmental protein;
Differentiation; Membrane; Neurogenesis; Nucleus; Reference proteome.
CHAIN 1 449 Interferon-related developmental
regulator 1.
/FTId=PRO_0000153288.
COMPBIAS 13 21 Poly-Gly.
COMPBIAS 142 147 Poly-Ala.
SEQUENCE 449 AA; 49783 MW; E1385CC622942219 CRC64;
MPKNKKRNAP HRGGGGGGGS GAATSAATTG GPHRTVQPFS DEDASIETMS HCSGYSDPSS
FAEDGPEVLD EEGTQEDLEY KLKGLIDLTL DKSAKTRQAA LEGVKNALSS KVLYEFVLER
RMTLTDSIER CLKKGKSDGQ RAAAALASVL CIQLGPGLES EEILKTLGPI LKKIICDGTA
SIQARQTCAT CFGVCCFIAT DDITELYSTL ECLEGIFTKS YLKEKDTNVP CSTPNTVLHI
SSLLAWTLLL TICPISEVKK KLELHFHKLP SLLSCDDVNM RIAAGESLAL LFELARGMES
DFFYEDMDSL TQMLRALATD GNKHRAKVDK RKQRSVFRDV LRAVEERDFP TETVKFGPER
MYIDSWVKKH TYDTFKEALG SGMQYHLQTN EFLRNVFELG PPVMLDAATL KTMKIPRFER
HLYNSAAFKA RTKARSKCRD KRADVGEFF


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