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Interferon-related developmental regulator 1 (Nerve growth factor-inducible protein PC4) (TPA-induced sequence 7) (TIS7 protein)

 IFRD1_MOUSE             Reviewed;         449 AA.
P19182; P21835; P70228; Q80XM4;
01-NOV-1990, integrated into UniProtKB/Swiss-Prot.
27-JUL-2011, sequence version 2.
27-SEP-2017, entry version 121.
RecName: Full=Interferon-related developmental regulator 1;
AltName: Full=Nerve growth factor-inducible protein PC4;
AltName: Full=TPA-induced sequence 7;
Short=TIS7 protein;
Name=Ifrd1; Synonyms=Tis7;
Mus musculus (Mouse).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
NCBI_TaxID=10090;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
PubMed=2797820;
Varnum B.C., Lim R.W., Herschman H.R.;
"Characterization of TIS7, a gene induced in Swiss 3T3 cells by the
tumor promoter tetradecanoyl phorbol acetate.";
Oncogene 4:1263-1265(1989).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.;
Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Eye;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
NUCLEOTIDE SEQUENCE [MRNA] OF 386-449.
PubMed=6179042; DOI=10.1093/nar/10.10.3069;
Skup D., Windass J.D., Sor F.S., George H., Williams B.R.,
Fukuhara H., de Maeyer-Guignard J., de Maeyer E.;
"Molecular cloning of partial cDNA copies of two distinct mouse IFN-
beta mRNAs.";
Nucleic Acids Res. 10:3069-3084(1982).
[5]
IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
TISSUE=Pancreas;
PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
"A tissue-specific atlas of mouse protein phosphorylation and
expression.";
Cell 143:1174-1189(2010).
-!- FUNCTION: Could play a role in regulating gene activity in the
proliferative and/or differentiative pathways induced by NGF. May
be an autocrine factor that attenuates or amplifies the initial
ligand-induced signal.
-!- SUBUNIT: Interacts with PSIP1/LEDGF. {ECO:0000250}.
-!- INDUCTION: By mitogens such as TPA in 373 cells and by nerve
growth factor in PC12 pheochromocytoma cells.
-!- SIMILARITY: Belongs to the IFRD family. {ECO:0000305}.
-!- CAUTION: Was originally thought to be interferon beta-2.
{ECO:0000305|PubMed:6179042}.
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EMBL; X17400; CAA35258.1; -; mRNA.
EMBL; CH466526; EDL36825.1; -; Genomic_DNA.
EMBL; BC043723; AAH43723.1; -; mRNA.
EMBL; V00756; CAA24133.1; ALT_SEQ; mRNA.
CCDS; CCDS25893.1; -.
PIR; A44989; A44989.
RefSeq; NP_038590.2; NM_013562.2.
UniGene; Mm.168; -.
ProteinModelPortal; P19182; -.
BioGrid; 200544; 5.
CORUM; P19182; -.
IntAct; P19182; 1.
MINT; MINT-1652065; -.
STRING; 10090.ENSMUSP00000001672; -.
iPTMnet; P19182; -.
PhosphoSitePlus; P19182; -.
EPD; P19182; -.
MaxQB; P19182; -.
PaxDb; P19182; -.
PeptideAtlas; P19182; -.
PRIDE; P19182; -.
Ensembl; ENSMUST00000001672; ENSMUSP00000001672; ENSMUSG00000001627.
GeneID; 15982; -.
KEGG; mmu:15982; -.
UCSC; uc007nky.2; mouse.
CTD; 3475; -.
MGI; MGI:1316717; Ifrd1.
eggNOG; KOG2842; Eukaryota.
eggNOG; ENOG410XSIZ; LUCA.
GeneTree; ENSGT00390000013347; -.
HOGENOM; HOG000252918; -.
HOVERGEN; HBG052089; -.
InParanoid; P19182; -.
OMA; QARQTCA; -.
OrthoDB; EOG091G083T; -.
TreeFam; TF313638; -.
ChiTaRS; Ifrd1; mouse.
PRO; PR:P19182; -.
Proteomes; UP000000589; Chromosome 12.
Bgee; ENSMUSG00000001627; -.
CleanEx; MM_IFRD1; -.
ExpressionAtlas; P19182; baseline and differential.
Genevisible; P19182; MM.
GO; GO:0005737; C:cytoplasm; IDA:MGI.
GO; GO:0005634; C:nucleus; IDA:MGI.
GO; GO:0061629; F:RNA polymerase II sequence-specific DNA binding transcription factor binding; ISO:MGI.
GO; GO:0042692; P:muscle cell differentiation; IMP:MGI.
GO; GO:0030517; P:negative regulation of axon extension; IGI:MGI.
GO; GO:0048671; P:negative regulation of collateral sprouting; IGI:MGI.
GO; GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; ISO:MGI.
GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISO:MGI.
GO; GO:0043403; P:skeletal muscle tissue regeneration; IMP:MGI.
GO; GO:0014706; P:striated muscle tissue development; IMP:MGI.
Gene3D; 1.25.10.10; -; 1.
InterPro; IPR011989; ARM-like.
InterPro; IPR016024; ARM-type_fold.
InterPro; IPR006921; Interferon-rel_develop_reg_C.
InterPro; IPR007701; Interferon-rel_develop_reg_N.
Pfam; PF05004; IFRD; 1.
Pfam; PF04836; IFRD_C; 1.
SUPFAM; SSF48371; SSF48371; 1.
1: Evidence at protein level;
Complete proteome; Developmental protein; Differentiation;
Reference proteome.
CHAIN 1 449 Interferon-related developmental
regulator 1.
/FTId=PRO_0000153286.
COMPBIAS 13 21 Poly-Gly.
COMPBIAS 142 147 Poly-Ala.
CONFLICT 43 43 D -> H (in Ref. 1; CAA35258).
{ECO:0000305}.
CONFLICT 104 104 L -> V (in Ref. 1; CAA35258).
{ECO:0000305}.
CONFLICT 399 399 L -> V (in Ref. 4; CAA24133).
{ECO:0000305}.
SEQUENCE 449 AA; 49935 MW; 01ACFC575F8AE6E8 CRC64;
MPKNKKRNAP HRGGGGGGGS GAATSAATAG GPHRTVQPFS DEDASIETMS HCSGYSDPSS
FAEDGPEVLD EEGTQEDLEY KLKGLIDLTL DKSAKTRQAA LEGLKNALSS KVLYEFVLER
RMTLTDSIER CLKKGKSDEQ RAAAAVASVL CIQLGPGFES EEILKTLGPI LKKIICDGAA
SIQARQTCAT CFGVCCFIAT DDITELYSTL ECFENIFTKS YLKEKDTNVT CSTPNTVLHI
SSLLAWTLLL TICPINEVKK KLELHFHKLP SLLSCDDVNM RIAAGESLAL LFELARGMES
DFFYEDMDSL TQMLRALATD GNKHRAKVDK RKQRSVFRDV LRAVEERDFP TETVKFGPER
MYIDSWVKKH TYDTFKEVLG SGMQYHLQTN EFLRNVFELG PPVMLDAATL KTMKISRFER
HLYNSAAFKA RTKARSKCRD KRADVGEFL


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