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Interleukin-20 (IL-20) (Cytokine Zcyto10)

 IL20_HUMAN              Reviewed;         176 AA.
Q9NYY1; Q17RB3; Q2THG6; Q96QZ6;
16-NOV-2001, integrated into UniProtKB/Swiss-Prot.
31-OCT-2003, sequence version 2.
28-FEB-2018, entry version 148.
RecName: Full=Interleukin-20;
Short=IL-20;
AltName: Full=Cytokine Zcyto10;
Flags: Precursor;
Name=IL20; Synonyms=ZCYTO10; ORFNames=UNQ852/PRO1801;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
PubMed=11163236; DOI=10.1016/S0092-8674(01)00187-8;
Blumberg H., Conklin D., Xu W.F., Grossmann A., Brender T.,
Carollo S., Eagan M., Foster D., Haldeman B.A., Hammond A., Haugen H.,
Jelinek L., Kelly J.D., Madden K., Maurer M.F., Parrish-Novak J.,
Prunkard D., Sexson S., Sprecher C., Waggie K., West J.,
Whitmore T.E., Yao L., Kuechle M.K., Dale B.A., Chandrasekher Y.A.;
"Interleukin 20: discovery, receptor identification, and role in
epidermal function.";
Cell 104:9-19(2001).
[2]
NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2), FUNCTION, ALTERNATIVE
SPLICING, AND TISSUE SPECIFICITY (ISOFORM 2).
PubMed=16511554; DOI=10.1038/sj.gene.6364291;
Hsieh M.Y., Chen W.Y., Jiang M.J., Cheng B.C., Huang T.Y., Chang M.S.;
"Interleukin-20 promotes angiogenesis in a direct and indirect
manner.";
Genes Immun. 7:234-242(2006).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
PubMed=12975309; DOI=10.1101/gr.1293003;
Clark H.F., Gurney A.L., Abaya E., Baker K., Baldwin D.T., Brush J.,
Chen J., Chow B., Chui C., Crowley C., Currell B., Deuel B., Dowd P.,
Eaton D., Foster J.S., Grimaldi C., Gu Q., Hass P.E., Heldens S.,
Huang A., Kim H.S., Klimowski L., Jin Y., Johnson S., Lee J.,
Lewis L., Liao D., Mark M.R., Robbie E., Sanchez C., Schoenfeld J.,
Seshagiri S., Simmons L., Singh J., Smith V., Stinson J., Vagts A.,
Vandlen R.L., Watanabe C., Wieand D., Woods K., Xie M.-H.,
Yansura D.G., Yi S., Yu G., Yuan J., Zhang M., Zhang Z., Goddard A.D.,
Wood W.I., Godowski P.J., Gray A.M.;
"The secreted protein discovery initiative (SPDI), a large-scale
effort to identify novel human secreted and transmembrane proteins: a
bioinformatics assessment.";
Genome Res. 13:2265-2270(2003).
[4]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
SeattleSNPs variation discovery resource;
Submitted (JUL-2001) to the EMBL/GenBank/DDBJ databases.
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=16710414; DOI=10.1038/nature04727;
Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D.,
Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A.,
Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F.,
McDonald L., Evans R., Phillips K., Atkinson A., Cooper R., Jones C.,
Hall R.E., Andrews T.D., Lloyd C., Ainscough R., Almeida J.P.,
Ambrose K.D., Anderson F., Andrew R.W., Ashwell R.I.S., Aubin K.,
Babbage A.K., Bagguley C.L., Bailey J., Beasley H., Bethel G.,
Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J., Buckley D.,
Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y., Clarke G.,
Clee C., Cobley V., Collier R.E., Corby N., Coville G.J., Davies J.,
Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H.,
Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L.,
Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J.,
Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R.,
Hammond S., Harrison E.S.I., Hart E., Haugen E., Heath P.D.,
Holmes S., Holt K., Howden P.J., Hunt A.R., Hunt S.E., Hunter G.,
Isherwood J., James R., Johnson C., Johnson D., Joy A., Kay M.,
Kershaw J.K., Kibukawa M., Kimberley A.M., King A., Knights A.J.,
Lad H., Laird G., Lawlor S., Leongamornlert D.A., Lloyd D.M.,
Loveland J., Lovell J., Lush M.J., Lyne R., Martin S.,
Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W., McLaren S.,
Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N.,
Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V.,
Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J.,
Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E.,
Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C.,
Subramanian S., Sycamore N., Tracey A., Tromans A., Van Helmond Z.,
Wall M., Wallis J.M., White S., Whitehead S.L., Wilkinson J.E.,
Willey D.L., Williams H., Wilming L., Wray P.W., Wu Z., Coulson A.,
Vaudin M., Sulston J.E., Durbin R.M., Hubbard T., Wooster R.,
Dunham I., Carter N.P., McVean G., Ross M.T., Harrow J., Olson M.V.,
Beck S., Rogers J., Bentley D.R.;
"The DNA sequence and biological annotation of human chromosome 1.";
Nature 441:315-321(2006).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
TISSUE=Testis;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[7]
PROTEIN SEQUENCE OF 25-39.
PubMed=15340161; DOI=10.1110/ps.04682504;
Zhang Z., Henzel W.J.;
"Signal peptide prediction based on analysis of experimentally
verified cleavage sites.";
Protein Sci. 13:2819-2824(2004).
[8]
TISSUE SPECIFICITY.
PubMed=16908179; DOI=10.1016/j.cyto.2006.07.006;
Hsing C.H., Ho C.L., Chang L.Y., Lee Y.L., Chuang S.S., Chang M.S.;
"Tissue microarray analysis of interleukin-20 expression.";
Cytokine 35:44-52(2006).
[9]
INDUCTION BY UV-B.
PubMed=16709143; DOI=10.1562/2005-08-31-RA-668;
Hunt D.W., Boivin W.A., Fairley L.A., Jovanovic M.M., King D.E.,
Salmon R.A., Utting O.B.;
"Ultraviolet B light stimulates interleukin-20 expression by human
epithelial keratinocytes.";
Photochem. Photobiol. 82:1292-1300(2006).
[10]
X-RAY CRYSTALLOGRAPHY (2.8 ANGSTROMS) OF 25-176 IN COMPLEX WITH IL20RA
AND IL20RB, SUBUNIT, AND DISULFIDE BONDS.
PubMed=22802649; DOI=10.1073/pnas.1117551109;
Logsdon N.J., Deshpande A., Harris B.D., Rajashankar K.R.,
Walter M.R.;
"Structural basis for receptor sharing and activation by interleukin-
20 receptor-2 (IL-20R2) binding cytokines.";
Proc. Natl. Acad. Sci. U.S.A. 109:12704-12709(2012).
-!- FUNCTION: Proinflammatory and angiogenic cytokine that may be
involved in epidermal function and psoriasis. Angiogenic and
proliferative activities are antagonized by IL10. May act through
STAT3. {ECO:0000269|PubMed:16511554}.
-!- SUBUNIT: Forms a 1:1:1 heterotrimeric complex with its primary
high-affinity heterodimeric receptor IL20RA/IL20RB.
{ECO:0000269|PubMed:22802649}.
-!- SUBCELLULAR LOCATION: Secreted.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=2;
Name=1; Synonyms=IL-20W, Wild type;
IsoId=Q9NYY1-1; Sequence=Displayed;
Name=2; Synonyms=IL-20S, ex4-del, Short;
IsoId=Q9NYY1-2; Sequence=VSP_054904;
Note=Lung-specific.;
-!- TISSUE SPECIFICITY: Expressed in most tissues and five major cell
types: epithelial cells (primarily skin, buccal mucosa, tongue,
nasal mucosa, lung, ureter, breast, prostate, fallopian tube, and
adrenal gland), myoepithelial cells (mainly prostate), endothelial
cells (mainly in small vessels or capillaries), macrophages, and
skeletal muscle. Isoform 2 was detected in the lung tissue only.
{ECO:0000269|PubMed:16908179}.
-!- INDUCTION: Up-regulated by UV-B irradiation in epithelial
keratinocytes. {ECO:0000269|PubMed:16709143}.
-!- SIMILARITY: Belongs to the IL-10 family. {ECO:0000305}.
-!- WEB RESOURCE: Name=SeattleSNPs;
URL="http://pga.gs.washington.edu/data/il20/";
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution-NoDerivs License
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EMBL; AF224266; AAF36679.1; -; mRNA.
EMBL; AY876922; AAW78348.1; -; mRNA.
EMBL; AY358320; AAQ88686.1; -; mRNA.
EMBL; AF402002; AAK84423.1; -; Genomic_DNA.
EMBL; AC098935; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BC069311; AAH69311.1; -; mRNA.
EMBL; BC069364; AAH69364.1; -; mRNA.
EMBL; BC069398; AAH69398.1; -; mRNA.
EMBL; BC069425; AAH69425.1; -; mRNA.
EMBL; BC069449; AAH69449.1; -; mRNA.
EMBL; BC069487; AAH69487.1; -; mRNA.
EMBL; BC069523; AAH69523.1; -; mRNA.
EMBL; BC069559; AAH69559.1; -; mRNA.
EMBL; BC074948; AAH74948.1; -; mRNA.
EMBL; BC074949; AAH74949.1; -; mRNA.
EMBL; BC117386; AAI17387.1; -; mRNA.
EMBL; BC117390; AAI17391.1; -; mRNA.
CCDS; CCDS1470.1; -. [Q9NYY1-1]
RefSeq; NP_061194.2; NM_018724.3. [Q9NYY1-1]
UniGene; Hs.272373; -.
PDB; 4DOH; X-ray; 2.80 A; A/C=25-176.
PDBsum; 4DOH; -.
ProteinModelPortal; Q9NYY1; -.
SMR; Q9NYY1; -.
BioGrid; 119086; 9.
IntAct; Q9NYY1; 3.
STRING; 9606.ENSP00000356063; -.
iPTMnet; Q9NYY1; -.
PhosphoSitePlus; Q9NYY1; -.
BioMuta; IL20; -.
DMDM; 38258955; -.
PaxDb; Q9NYY1; -.
PeptideAtlas; Q9NYY1; -.
PRIDE; Q9NYY1; -.
DNASU; 50604; -.
Ensembl; ENST00000367096; ENSP00000356063; ENSG00000162891. [Q9NYY1-1]
Ensembl; ENST00000367098; ENSP00000356065; ENSG00000162891. [Q9NYY1-1]
Ensembl; ENST00000391930; ENSP00000375796; ENSG00000162891. [Q9NYY1-2]
GeneID; 50604; -.
KEGG; hsa:50604; -.
UCSC; uc001her.4; human. [Q9NYY1-1]
CTD; 50604; -.
DisGeNET; 50604; -.
EuPathDB; HostDB:ENSG00000162891.10; -.
GeneCards; IL20; -.
HGNC; HGNC:6002; IL20.
HPA; CAB025802; -.
MIM; 605619; gene.
neXtProt; NX_Q9NYY1; -.
OpenTargets; ENSG00000162891; -.
PharmGKB; PA29817; -.
eggNOG; ENOG410IW76; Eukaryota.
eggNOG; ENOG410YMTB; LUCA.
GeneTree; ENSGT00410000025637; -.
HOGENOM; HOG000113033; -.
HOVERGEN; HBG108002; -.
InParanoid; Q9NYY1; -.
KO; K05444; -.
OMA; HHTLRKI; -.
OrthoDB; EOG091G0Q0Q; -.
PhylomeDB; Q9NYY1; -.
TreeFam; TF333253; -.
Reactome; R-HSA-8854691; Interleukin-20 family signaling.
SignaLink; Q9NYY1; -.
SIGNOR; Q9NYY1; -.
ChiTaRS; IL20; human.
GenomeRNAi; 50604; -.
PRO; PR:Q9NYY1; -.
Proteomes; UP000005640; Chromosome 1.
Bgee; ENSG00000162891; -.
CleanEx; HS_IL20; -.
Genevisible; Q9NYY1; HS.
GO; GO:0005576; C:extracellular region; TAS:UniProtKB.
GO; GO:0005615; C:extracellular space; IEA:UniProtKB-KW.
GO; GO:0005125; F:cytokine activity; IEA:UniProtKB-KW.
GO; GO:0045517; F:interleukin-20 receptor binding; TAS:UniProtKB.
GO; GO:0045518; F:interleukin-22 receptor binding; IEA:Ensembl.
GO; GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.
GO; GO:0045606; P:positive regulation of epidermal cell differentiation; TAS:UniProtKB.
GO; GO:0045618; P:positive regulation of keratinocyte differentiation; TAS:UniProtKB.
GO; GO:0045672; P:positive regulation of osteoclast differentiation; IEA:Ensembl.
GO; GO:0042531; P:positive regulation of tyrosine phosphorylation of STAT protein; TAS:UniProtKB.
GO; GO:0050727; P:regulation of inflammatory response; TAS:UniProtKB.
InterPro; IPR009079; 4_helix_cytokine-like_core.
InterPro; IPR020443; IL-10/19/20/22/24/26_fam.
InterPro; IPR020423; IL-10_CS.
InterPro; IPR020442; IL-20.
Pfam; PF00726; IL10; 1.
PRINTS; PR01935; INTRLEUKIN20.
SMART; SM00188; IL10; 1.
SUPFAM; SSF47266; SSF47266; 1.
PROSITE; PS00520; INTERLEUKIN_10; 1.
1: Evidence at protein level;
3D-structure; Alternative splicing; Complete proteome; Cytokine;
Direct protein sequencing; Disulfide bond; Polymorphism;
Reference proteome; Secreted; Signal.
SIGNAL 1 24 {ECO:0000269|PubMed:15340161}.
CHAIN 25 176 Interleukin-20.
/FTId=PRO_0000015381.
DISULFID 33 126 {ECO:0000269|PubMed:22802649}.
DISULFID 80 132 {ECO:0000269|PubMed:22802649}.
DISULFID 81 134 {ECO:0000269|PubMed:22802649}.
VAR_SEQ 127 151 Missing (in isoform 2).
{ECO:0000303|PubMed:16511554}.
/FTId=VSP_054904.
VARIANT 107 107 R -> Q (in dbSNP:rs35856950).
/FTId=VAR_049577.
CONFLICT 48 48 E -> D (in Ref. 1; AAF36679).
{ECO:0000305}.
CONFLICT 126 126 C -> S (in Ref. 3; AAQ88686).
{ECO:0000305}.
STRAND 26 30 {ECO:0000244|PDB:4DOH}.
STRAND 33 37 {ECO:0000244|PDB:4DOH}.
HELIX 39 47 {ECO:0000244|PDB:4DOH}.
HELIX 50 55 {ECO:0000244|PDB:4DOH}.
STRAND 67 69 {ECO:0000244|PDB:4DOH}.
HELIX 76 93 {ECO:0000244|PDB:4DOH}.
HELIX 95 97 {ECO:0000244|PDB:4DOH}.
HELIX 103 128 {ECO:0000244|PDB:4DOH}.
HELIX 136 151 {ECO:0000244|PDB:4DOH}.
HELIX 154 162 {ECO:0000244|PDB:4DOH}.
HELIX 165 174 {ECO:0000244|PDB:4DOH}.
SEQUENCE 176 AA; 20072 MW; 8385992500B6C447 CRC64;
MKASSLAFSL LSAAFYLLWT PSTGLKTLNL GSCVIATNLQ EIRNGFSEIR GSVQAKDGNI
DIRILRRTES LQDTKPANRC CLLRHLLRLY LDRVFKNYQT PDHYTLRKIS SLANSFLTIK
KDLRLCHAHM TCHCGEEAMK KYSQILSHFE KLEPQAAVVK ALGELDILLQ WMEETE


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