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Jasmonic acid-amido synthetase JAR1 (EC 6.3.2.-) (Auxin-responsive GH3-like protein 5) (OsGH3-5) (Indole-3-acetic acid-amido synthetase GH3.5) (Jasmonate-amino acid synthetase JAR1) (Protein JASMONATE RESISTANT 1) (OsJAR1)

 GH35_ORYSJ              Reviewed;         581 AA.
Q6I581; A0A0P0WRM7; Q0DFJ9;
22-NOV-2005, integrated into UniProtKB/Swiss-Prot.
19-JUL-2004, sequence version 1.
25-OCT-2017, entry version 71.
RecName: Full=Jasmonic acid-amido synthetase JAR1 {ECO:0000305};
EC=6.3.2.-;
AltName: Full=Auxin-responsive GH3-like protein 5 {ECO:0000303|PubMed:15856348};
Short=OsGH3-5 {ECO:0000303|PubMed:15856348};
AltName: Full=Indole-3-acetic acid-amido synthetase GH3.5 {ECO:0000305};
AltName: Full=Jasmonate-amino acid synthetase JAR1 {ECO:0000305};
AltName: Full=Protein JASMONATE RESISTANT 1 {ECO:0000303|PubMed:18266905};
Short=OsJAR1 {ECO:0000303|PubMed:18266905};
Name=GH3.5 {ECO:0000303|PubMed:15856348};
Synonyms=JAR1 {ECO:0000303|PubMed:18266905};
OrderedLocusNames=Os05g0586200 {ECO:0000312|EMBL:BAF18374.1},
LOC_Os05g50890 {ECO:0000305};
ORFNames=OsJ_19714 {ECO:0000312|EMBL:EEE64857.1}, OSJNBa0009C07.16;
Oryza sativa subsp. japonica (Rice).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade;
Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
NCBI_TaxID=39947;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
PubMed=16261349; DOI=10.1007/s00438-005-0039-y;
Cheng C.-H., Chung M.C., Liu S.-M., Chen S.-K., Kao F.Y., Lin S.-J.,
Hsiao S.-H., Tseng I.C., Hsing Y.-I.C., Wu H.-P., Chen C.-S.,
Shaw J.-F., Wu J., Matsumoto T., Sasaki T., Chen H.-C., Chow T.-Y.;
"A fine physical map of the rice chromosome 5.";
Mol. Genet. Genomics 274:337-345(2005).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
PubMed=16100779; DOI=10.1038/nature03895;
International rice genome sequencing project (IRGSP);
"The map-based sequence of the rice genome.";
Nature 436:793-800(2005).
[3]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
PubMed=18089549; DOI=10.1093/nar/gkm978;
The rice annotation project (RAP);
"The rice annotation project database (RAP-DB): 2008 update.";
Nucleic Acids Res. 36:D1028-D1033(2008).
[4]
GENOME REANNOTATION.
STRAIN=cv. Nipponbare;
PubMed=24280374; DOI=10.1186/1939-8433-6-4;
Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H.,
McCombie W.R., Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S.,
Childs K.L., Davidson R.M., Lin H., Quesada-Ocampo L.,
Vaillancourt B., Sakai H., Lee S.S., Kim J., Numa H., Itoh T.,
Buell C.R., Matsumoto T.;
"Improvement of the Oryza sativa Nipponbare reference genome using
next generation sequence and optical map data.";
Rice 6:4-4(2013).
[5]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Nipponbare;
PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H.,
Cong L., Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J.,
Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X.,
Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y.,
Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J.,
Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y.,
Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y.,
Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z.,
Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T.,
Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H.,
Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W.,
Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L.,
Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J.,
Samudrala R., Wang J., Wong G.K.-S., Yang H.;
"The genomes of Oryza sativa: a history of duplications.";
PLoS Biol. 3:266-281(2005).
[6]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Nipponbare;
PubMed=12869764; DOI=10.1126/science.1081288;
The rice full-length cDNA consortium;
"Collection, mapping, and annotation of over 28,000 cDNA clones from
japonica rice.";
Science 301:376-379(2003).
[7]
TISSUE SPECIFICITY, INDUCTION, AND NOMENCLATURE.
PubMed=15856348; DOI=10.1007/s10142-005-0142-5;
Jain M., Kaur N., Tyagi A.K., Khurana J.P.;
"The auxin-responsive GH3 gene family in rice (Oryza sativa).";
Funct. Integr. Genomics 6:36-46(2006).
[8]
FUNCTION, INDUCTION, AND DISRUPTION PHENOTYPE.
PubMed=18266905; DOI=10.1111/j.1365-3040.2008.01790.x;
Riemann M., Riemann M., Takano M.;
"Rice JASMONATE RESISTANT 1 is involved in phytochrome and jasmonate
signalling.";
Plant Cell Environ. 31:783-792(2008).
[9]
FUNCTION, AND INDUCTION.
PubMed=21619871; DOI=10.1016/j.bbrc.2011.05.055;
Wakuta S., Suzuki E., Saburi W., Matsuura H., Nabeta K., Imai R.,
Matsui H.;
"OsJAR1 and OsJAR2 are jasmonyl-L-isoleucine synthases involved in
wound- and pathogen-induced jasmonic acid signalling.";
Biochem. Biophys. Res. Commun. 409:634-639(2011).
[10]
FUNCTION, AND DISRUPTION PHENOTYPE.
PubMed=23832371; DOI=10.1271/bbb.130272;
Shimizu T., Miyamoto K., Miyamoto K., Minami E., Nishizawa Y.,
Iino M., Nojiri H., Yamane H., Okada K.;
"OsJAR1 contributes mainly to biosynthesis of the stress-induced
jasmonoyl-isoleucine involved in defense responses in rice.";
Biosci. Biotechnol. Biochem. 77:1556-1564(2013).
[11]
FUNCTION, INDUCTION, AND DISRUPTION PHENOTYPE.
PubMed=23621526; DOI=10.1111/jipb.12057;
Fukumoto K., Alamgir K., Yamashita Y., Mori I.C., Matsuura H.,
Galis I.;
"Response of rice to insect elicitors and the role of OsJAR1 in wound
and herbivory-induced JA-Ile accumulation.";
J. Integr. Plant Biol. 55:775-784(2013).
[12]
FUNCTION.
PubMed=24033451; DOI=10.1111/pce.12201;
Svyatyna K., Jikumaru Y., Brendel R., Reichelt M., Mithoefer A.,
Takano M., Kamiya Y., Nick P., Riemann M.;
"Light induces jasmonate-isoleucine conjugation via OsJAR1-dependent
and -independent pathways in rice.";
Plant Cell Environ. 37:827-839(2014).
[13]
FUNCTION, AND DISRUPTION PHENOTYPE.
PubMed=24947835; DOI=10.1007/s11103-014-0212-y;
Xiao Y., Chen Y., Charnikhova T., Mulder P.P., Heijmans J.,
Hoogenboom A., Agalou A., Michel C., Morel J.B., Dreni L., Kater M.M.,
Bouwmeester H., Wang M., Zhu Z., Ouwerkerk P.B.;
"OsJAR1 is required for JA-regulated floret opening and anther
dehiscence in rice.";
Plant Mol. Biol. 86:19-33(2014).
-!- FUNCTION: Catalyzes the synthesis of jasmonate-amino acid
conjugates by adenylation. Catalyzes the conjugation of jasmonate
(JA) to Ile when expressed in a heterologous system (E.Coli)
(PubMed:21619871). Catalyzes in vitro the conjugation of jasmonate
(JA) to Ile, Phe, Cys, Leu, Met, Ala, Val and Trp
(PubMed:24033451). Involved in the production of JA-Ile in
response to infection by the rice blast fungus Magnaporthe oryzae
(PubMed:21619871, PubMed:23832371). Required for the accumulation
of the flavonoid phytoalexin sakuranetin in response to infection
by the rice blast fungus (PubMed:23832371). Involved in herbivory-
induced JA-Ile accumulation (PubMed:23621526). Involved in the
production of JA-Ile in response to wounding (PubMed:21619871,
PubMed:23621526, PubMed:24033451). Required for modulation of
light and JA signaling in photomorphogenesis (PubMed:18266905).
Required for normal seed development (PubMed:18266905,
PubMed:23621526). Required for optimal flower opening and closing
and anther dehiscence (PubMed:24947835). May catalyze the
synthesis of indole-3-acetic acid (IAA)-amino acid conjugates,
providing a mechanism for the plant to cope with the presence of
excess auxin (By similarity). {ECO:0000250|UniProtKB:O82333,
ECO:0000269|PubMed:18266905, ECO:0000269|PubMed:21619871,
ECO:0000269|PubMed:23621526, ECO:0000269|PubMed:23832371,
ECO:0000269|PubMed:24033451, ECO:0000269|PubMed:24947835}.
-!- TISSUE SPECIFICITY: Expressed in green shoots, roots and flowers.
{ECO:0000269|PubMed:15856348}.
-!- INDUCTION: At low level by auxin. Induced by methyl jasmonate
(MeJA), red light, far-red light and blue light (PubMed:18266905).
Induced by wounding and infection by the rice blast fungus
Magnaporthe oryzae (PubMed:21619871). Induced by elicitors from
oral secretions of armyworm caterpillars (Spodoptera mauritia)
(PubMed:23621526). {ECO:0000269|PubMed:15856348,
ECO:0000269|PubMed:18266905, ECO:0000269|PubMed:21619871,
ECO:0000269|PubMed:23621526}.
-!- DISRUPTION PHENOTYPE: Open-husk phenotype after pollination and
malformed seeds with low fertility (PubMed:18266905,
PubMed:23621526, PubMed:24947835). Increased susceptibility to
infection by the rice blast fungus Magnaporthe oryzae
(PubMed:23832371). {ECO:0000269|PubMed:18266905,
ECO:0000269|PubMed:23621526, ECO:0000269|PubMed:23832371,
ECO:0000269|PubMed:24947835}.
-!- SIMILARITY: Belongs to the IAA-amido conjugating enzyme family.
{ECO:0000305}.
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Distributed under the Creative Commons Attribution-NoDerivs License
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EMBL; AC137608; AAT47070.1; -; Genomic_DNA.
EMBL; AP008211; BAF18374.1; -; Genomic_DNA.
EMBL; AP014961; BAS95574.1; -; Genomic_DNA.
EMBL; CM000142; EEE64857.1; -; Genomic_DNA.
EMBL; AK071721; BAG92652.1; -; mRNA.
RefSeq; XP_015639715.1; XM_015784229.1.
UniGene; Os.81757; -.
SMR; Q6I581; -.
STRING; 39947.LOC_Os05g50890.1; -.
PaxDb; Q6I581; -.
EnsemblPlants; OS05T0586200-01; OS05T0586200-01; OS05G0586200.
GeneID; 4339756; -.
Gramene; OS05T0586200-01; OS05T0586200-01; OS05G0586200.
KEGG; osa:4339756; -.
eggNOG; ENOG410IE8C; Eukaryota.
eggNOG; ENOG410XQH0; LUCA.
HOGENOM; HOG000238302; -.
InParanoid; Q6I581; -.
KO; K14506; -.
OMA; KIQEHFL; -.
OrthoDB; EOG0936058G; -.
Reactome; R-OSA-6798695; Neutrophil degranulation.
Proteomes; UP000059680; Chromosome 5.
Genevisible; Q6I581; OS.
GO; GO:0005773; C:vacuole; IEA:EnsemblPlants.
GO; GO:0070566; F:adenylyltransferase activity; IEA:EnsemblPlants.
GO; GO:0019899; F:enzyme binding; IEA:EnsemblPlants.
GO; GO:0080123; F:jasmonate-amino synthetase activity; IEA:EnsemblPlants.
GO; GO:0071365; P:cellular response to auxin stimulus; IEA:EnsemblPlants.
GO; GO:0009864; P:induced systemic resistance, jasmonic acid mediated signaling pathway; IEA:EnsemblPlants.
GO; GO:0009694; P:jasmonic acid metabolic process; IEA:EnsemblPlants.
GO; GO:0031348; P:negative regulation of defense response; IEA:EnsemblPlants.
GO; GO:0009640; P:photomorphogenesis; IEA:EnsemblPlants.
GO; GO:0009585; P:red, far-red light phototransduction; IEA:EnsemblPlants.
GO; GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.
GO; GO:2000377; P:regulation of reactive oxygen species metabolic process; IEA:EnsemblPlants.
GO; GO:2000030; P:regulation of response to red or far red light; IEA:EnsemblPlants.
GO; GO:0010119; P:regulation of stomatal movement; IEA:EnsemblPlants.
GO; GO:0009733; P:response to auxin; IC:Gramene.
GO; GO:0009416; P:response to light stimulus; IC:Gramene.
GO; GO:0010046; P:response to mycotoxin; IEA:EnsemblPlants.
GO; GO:0010193; P:response to ozone; IEA:EnsemblPlants.
GO; GO:0010224; P:response to UV-B; IEA:EnsemblPlants.
GO; GO:0009611; P:response to wounding; IEA:EnsemblPlants.
GO; GO:0009627; P:systemic acquired resistance; IEA:EnsemblPlants.
InterPro; IPR004993; GH3.
InterPro; IPR031110; JAR1.
PANTHER; PTHR31901; PTHR31901; 1.
PANTHER; PTHR31901:SF13; PTHR31901:SF13; 1.
Pfam; PF03321; GH3; 1.
2: Evidence at transcript level;
Complete proteome; Developmental protein; Growth regulation;
Jasmonic acid signaling pathway; Ligase; Plant defense;
Reference proteome; Stress response.
CHAIN 1 581 Jasmonic acid-amido synthetase JAR1.
/FTId=PRO_0000203582.
BINDING 95 95 jasmonate.
{ECO:0000250|UniProtKB:Q9SKE2}.
BINDING 326 326 jasmonate.
{ECO:0000250|UniProtKB:Q9SKE2}.
SEQUENCE 581 AA; 65095 MW; 4AFB20349ABB6818 CRC64;
MTICSCEETI NEFEMLTRDA ARVQKDTLKK ILEINASAEY LQNFGLGGRT DAESYKSCIP
LCVHNDIEPY IQRIVDGDTS PVVTGEPITN LSLSSGTTHG KPKFIPFNDE LLETTLQIYR
TSYAFRNREY PIGQGKALQF VYGSKQVITK GGILATTATT NLYRRQRYKE GMKDIQSQCC
SPDEVIFGPD FHQSLYCHLL CGLIYSEEVH SVFSTFAHSL VHAFQTFEEV WEDLCTDIRD
GVLSKKVTAP SIREAVSKIL KPNPELADSI YKKCIGLSNW YGVIPALWPN AKYVYGIMTG
SMEPYLKKLR HYAGNLPLIS ADYGASEGWV GSNIDPTVPP EQVTYAVLPQ VGYFEFIPLE
KPIGEETENS ASIHYIESDP VGLTEVEVGK IYEVVITNFA GLYRYRLGDV VKIARFHNST
PELQFICRRS LVLSINIDKN TEKDLQLAVE EASKFLEGEK LEVMDFTSFV ERSSDPGRYV
IFWELSGDAS DEVLSSCANA LDLAFIDAGY TGSRKIKTIG PLELRILRKG TFKEILDHFL
SLGGAVSQFK TPRFVNPSNS KVLQILSRNV TQSYFSTAYG F


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