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KIT proto-oncogene receptor tyrosine kinase

 H0ZBL7_TAEGU            Unreviewed;       948 AA.
H0ZBL7;
22-FEB-2012, integrated into UniProtKB/TrEMBL.
22-FEB-2012, sequence version 1.
25-OCT-2017, entry version 54.
SubName: Full=KIT proto-oncogene receptor tyrosine kinase {ECO:0000313|Ensembl:ENSTGUP00000007975};
Name=KIT {ECO:0000313|Ensembl:ENSTGUP00000007975};
Taeniopygia guttata (Zebra finch) (Poephila guttata).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea;
Estrildidae; Estrildinae; Taeniopygia.
NCBI_TaxID=59729 {ECO:0000313|Ensembl:ENSTGUP00000007975, ECO:0000313|Proteomes:UP000007754};
[1] {ECO:0000313|Ensembl:ENSTGUP00000007975, ECO:0000313|Proteomes:UP000007754}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=20360741; DOI=10.1038/nature08819;
Warren W.C., Clayton D.F., Ellegren H., Arnold A.P., Hillier L.W.,
Kunstner A., Searle S., White S., Vilella A.J., Fairley S., Heger A.,
Kong L., Ponting C.P., Jarvis E.D., Mello C.V., Minx P., Lovell P.,
Velho T.A., Ferris M., Balakrishnan C.N., Sinha S., Blatti C.,
London S.E., Li Y., Lin Y.C., George J., Sweedler J., Southey B.,
Gunaratne P., Watson M., Nam K., Backstrom N., Smeds L., Nabholz B.,
Itoh Y., Whitney O., Pfenning A.R., Howard J., Volker M.,
Skinner B.M., Griffin D.K., Ye L., McLaren W.M., Flicek P.,
Quesada V., Velasco G., Lopez-Otin C., Puente X.S., Olender T.,
Lancet D., Smit A.F., Hubley R., Konkel M.K., Walker J.A.,
Batzer M.A., Gu W., Pollock D.D., Chen L., Cheng Z., Eichler E.E.,
Stapley J., Slate J., Ekblom R., Birkhead T., Burke T., Burt D.,
Scharff C., Adam I., Richard H., Sultan M., Soldatov A., Lehrach H.,
Edwards S.V., Yang S.P., Li X., Graves T., Fulton L., Nelson J.,
Chinwalla A., Hou S., Mardis E.R., Wilson R.K.;
"The genome of a songbird.";
Nature 464:757-762(2010).
[2] {ECO:0000313|Ensembl:ENSTGUP00000007975}
IDENTIFICATION.
Ensembl;
Submitted (JAN-2012) to UniProtKB.
-!- CATALYTIC ACTIVITY: ATP + a [protein]-L-tyrosine = ADP + a
[protein]-L-tyrosine phosphate. {ECO:0000256|RuleBase:RU000311,
ECO:0000256|SAAS:SAAS00701269}.
-!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|RuleBase:RU000311};
Single-pass type I membrane protein
{ECO:0000256|RuleBase:RU000311}.
-!- SIMILARITY: Belongs to the protein kinase superfamily. Tyr protein
kinase family. CSF-1/PDGF receptor subfamily.
{ECO:0000256|RuleBase:RU000311}.
-!- CAUTION: The sequence shown here is derived from an Ensembl
automatic analysis pipeline and should be considered as
preliminary data. {ECO:0000313|Ensembl:ENSTGUP00000007975}.
-----------------------------------------------------------------------
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EMBL; ABQF01011199; -; NOT_ANNOTATED_CDS; Genomic_DNA.
STRING; 59729.ENSTGUP00000007975; -.
Ensembl; ENSTGUT00000008060; ENSTGUP00000007975; ENSTGUG00000007686.
eggNOG; KOG0200; Eukaryota.
eggNOG; COG0515; LUCA.
GeneTree; ENSGT00760000118923; -.
InParanoid; H0ZBL7; -.
OMA; PTFKQIV; -.
OrthoDB; EOG091G01TL; -.
TreeFam; TF325768; -.
Reactome; R-TGU-1257604; PIP3 activates AKT signaling.
Reactome; R-TGU-1433557; Signaling by SCF-KIT.
Reactome; R-TGU-1433559; Regulation of KIT signaling.
Reactome; R-TGU-5673001; RAF/MAP kinase cascade.
Reactome; R-TGU-6811558; PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling.
Proteomes; UP000007754; Chromosome 4.
GO; GO:0005911; C:cell-cell junction; IEA:Ensembl.
GO; GO:0009897; C:external side of plasma membrane; IEA:Ensembl.
GO; GO:0005615; C:extracellular space; IEA:Ensembl.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0042629; C:mast cell granule; IEA:GOC.
GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO; GO:0019955; F:cytokine binding; IEA:Ensembl.
GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO; GO:0002020; F:protease binding; IEA:Ensembl.
GO; GO:0042803; F:protein homodimerization activity; IEA:Ensembl.
GO; GO:0004716; F:signal transducer, downstream of receptor, with protein tyrosine kinase activity; IEA:InterPro.
GO; GO:0005020; F:stem cell factor receptor activity; IEA:Ensembl.
GO; GO:0031532; P:actin cytoskeleton reorganization; IEA:Ensembl.
GO; GO:0000187; P:activation of MAPK activity; IEA:Ensembl.
GO; GO:0097067; P:cellular response to thyroid hormone stimulus; IEA:Ensembl.
GO; GO:0002371; P:dendritic cell cytokine production; IEA:Ensembl.
GO; GO:0050910; P:detection of mechanical stimulus involved in sensory perception of sound; IEA:Ensembl.
GO; GO:0048565; P:digestive tract development; IEA:Ensembl.
GO; GO:0035234; P:ectopic germ cell programmed cell death; IEA:Ensembl.
GO; GO:0035162; P:embryonic hemopoiesis; IEA:Ensembl.
GO; GO:0030218; P:erythrocyte differentiation; IEA:Ensembl.
GO; GO:0038162; P:erythropoietin-mediated signaling pathway; IEA:Ensembl.
GO; GO:0038093; P:Fc receptor signaling pathway; IEA:Ensembl.
GO; GO:0006687; P:glycosphingolipid metabolic process; IEA:Ensembl.
GO; GO:0035701; P:hematopoietic stem cell migration; IEA:Ensembl.
GO; GO:0002327; P:immature B cell differentiation; IEA:Ensembl.
GO; GO:0006954; P:inflammatory response; IEA:Ensembl.
GO; GO:0030032; P:lamellipodium assembly; IEA:Ensembl.
GO; GO:0002320; P:lymphoid progenitor cell differentiation; IEA:Ensembl.
GO; GO:0008584; P:male gonad development; IEA:Ensembl.
GO; GO:0002551; P:mast cell chemotaxis; IEA:Ensembl.
GO; GO:0032762; P:mast cell cytokine production; IEA:Ensembl.
GO; GO:0043303; P:mast cell degranulation; IEA:Ensembl.
GO; GO:0060374; P:mast cell differentiation; IEA:Ensembl.
GO; GO:0035855; P:megakaryocyte development; IEA:Ensembl.
GO; GO:0097326; P:melanocyte adhesion; IEA:Ensembl.
GO; GO:0030318; P:melanocyte differentiation; IEA:Ensembl.
GO; GO:0097324; P:melanocyte migration; IEA:Ensembl.
GO; GO:0002318; P:myeloid progenitor cell differentiation; IEA:Ensembl.
GO; GO:0043069; P:negative regulation of programmed cell death; IEA:Ensembl.
GO; GO:0001541; P:ovarian follicle development; IEA:Ensembl.
GO; GO:0008284; P:positive regulation of cell proliferation; IEA:Ensembl.
GO; GO:0010628; P:positive regulation of gene expression; IEA:Ensembl.
GO; GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IEA:Ensembl.
GO; GO:0042531; P:positive regulation of tyrosine phosphorylation of STAT protein; IEA:Ensembl.
GO; GO:1905065; P:positive regulation of vascular smooth muscle cell differentiation; IEA:Ensembl.
GO; GO:0046777; P:protein autophosphorylation; IEA:Ensembl.
GO; GO:0008360; P:regulation of cell shape; IEA:Ensembl.
GO; GO:0048070; P:regulation of developmental pigmentation; IEA:Ensembl.
GO; GO:0009314; P:response to radiation; IEA:Ensembl.
GO; GO:0007286; P:spermatid development; IEA:Ensembl.
GO; GO:0048863; P:stem cell differentiation; IEA:Ensembl.
GO; GO:0030217; P:T cell differentiation; IEA:Ensembl.
Gene3D; 2.60.40.10; -; 5.
InterPro; IPR007110; Ig-like_dom.
InterPro; IPR036179; Ig-like_dom_sf.
InterPro; IPR013783; Ig-like_fold.
InterPro; IPR003599; Ig_sub.
InterPro; IPR003598; Ig_sub2.
InterPro; IPR013151; Immunoglobulin.
InterPro; IPR011009; Kinase-like_dom.
InterPro; IPR000719; Prot_kinase_dom.
InterPro; IPR017441; Protein_kinase_ATP_BS.
InterPro; IPR027263; SCGF_receptor.
InterPro; IPR001245; Ser-Thr/Tyr_kinase_cat_dom.
InterPro; IPR008266; Tyr_kinase_AS.
InterPro; IPR020635; Tyr_kinase_cat_dom.
InterPro; IPR001824; Tyr_kinase_rcpt_3_CS.
Pfam; PF00047; ig; 1.
Pfam; PF07714; Pkinase_Tyr; 1.
PIRSF; PIRSF500951; SCGF_recepter; 1.
SMART; SM00409; IG; 5.
SMART; SM00408; IGc2; 3.
SMART; SM00219; TyrKc; 1.
SUPFAM; SSF48726; SSF48726; 4.
SUPFAM; SSF56112; SSF56112; 2.
PROSITE; PS50835; IG_LIKE; 1.
PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PROSITE; PS00109; PROTEIN_KINASE_TYR; 1.
PROSITE; PS00240; RECEPTOR_TYR_KIN_III; 1.
3: Inferred from homology;
ATP-binding {ECO:0000256|PIRSR:PIRSR500951-2,
ECO:0000256|SAAS:SAAS00708816};
Complete proteome {ECO:0000313|Proteomes:UP000007754};
Disulfide bond {ECO:0000256|SAAS:SAAS00803457};
Immunoglobulin domain {ECO:0000256|RuleBase:RU000311,
ECO:0000256|SAAS:SAAS00442402};
Kinase {ECO:0000256|SAAS:SAAS00582553};
Magnesium {ECO:0000256|PIRSR:PIRSR500951-1};
Membrane {ECO:0000256|SAAS:SAAS00602683, ECO:0000256|SAM:Phobius};
Metal-binding {ECO:0000256|PIRSR:PIRSR500951-1};
Nucleotide-binding {ECO:0000256|PIRSR:PIRSR500951-2,
ECO:0000256|SAAS:SAAS00708816};
Receptor {ECO:0000256|RuleBase:RU000311,
ECO:0000256|SAAS:SAAS00600436};
Reference proteome {ECO:0000313|Proteomes:UP000007754};
Repeat {ECO:0000256|SAAS:SAAS00457685};
Signal {ECO:0000256|SAM:SignalP};
Transferase {ECO:0000256|SAAS:SAAS00582553};
Transmembrane {ECO:0000256|SAAS:SAAS00602683,
ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAAS:SAAS00602683,
ECO:0000256|SAM:Phobius};
Tyrosine-protein kinase {ECO:0000256|SAAS:SAAS00582553}.
SIGNAL 1 19 {ECO:0000256|SAM:SignalP}.
CHAIN 20 948 {ECO:0000256|SAM:SignalP}.
/FTId=PRO_5003546763.
TRANSMEM 499 522 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 189 278 Ig-like. {ECO:0000259|PROSITE:PS50835}.
DOMAIN 563 901 Protein kinase.
{ECO:0000259|PROSITE:PS50011}.
NP_BIND 570 577 ATP. {ECO:0000256|PIRSR:PIRSR500951-2}.
NP_BIND 645 651 ATP. {ECO:0000256|PIRSR:PIRSR500951-2}.
METAL 542 542 Magnesium.
{ECO:0000256|PIRSR:PIRSR500951-1}.
METAL 770 770 Magnesium.
{ECO:0000256|PIRSR:PIRSR500951-1}.
METAL 783 783 Magnesium.
{ECO:0000256|PIRSR:PIRSR500951-1}.
BINDING 597 597 ATP. {ECO:0000256|PIRSR:PIRSR500951-2}.
BINDING 769 769 ATP. {ECO:0000256|PIRSR:PIRSR500951-2}.
SITE 909 909 Important for interaction with
phosphotyrosine-binding proteins.
{ECO:0000256|PIRSR:PIRSR500951-3}.
SEQUENCE 948 AA; 106040 MW; CC3C9816345494F2 CRC64;
HSILCFFFFP GGALSPVESL RVVNKGEELR LTCNEERPVT WNFQNSDPSA KARSSNEKEW
YTRNATVRDV GRYTCRSNGS IVSSYYVFVK DPNVLFLVDS LIYGKEDSDI LLVCPLTDPN
VTNFTLKKCD GRRLPRNMTF IPNPQKGIII KNVQRSFKGC YQCLAKHNGV EKISEKIFLN
VRPVHKTLPV ITLSKSYELL KEGEEFEVTC IITDVDSSVQ ASWISLKSGI VTSKSRNLGD
YGYERKLTLN IRSVGVNDSG EFTCQAENPF GKTNATVTLK ALAKGFVRLF ATMNTTIDIN
AGQNGNLTVE YEAYPKPKEE VWMYMNETLQ NSSDHDVKFK TVGNNSYTSE LHLTRLKGTE
GGIYTFFVSN SDASSSVTFN VYVKTKPEIL TLDILSNGVL QCVAAGFPAP TIYWYFCPGT
EQRCFDSPTI SPMDVKIGYT NSSVPSFERI LVESTINASM FRSTGTVCCE ASSNGDRSSA
FFNFAIKEQI RTHTLFTPLL TAFGVAAGLM CIIVMILVYI YLQKPKYEVQ WKVVEEINGN
NYVYIDPTQL PYDHKWEFPR NRLSFGKTLG AGAFGKVVEA TAYGLFKSDA AMTVAVKMLK
TSAHLTEREA LMSELKVLSY LGNHINIVNL LGACTVGGPT LVITEYCCYG DLLNFLRRKR
DSFICPKHEE HADAAVYENL LHQSEPAADV ANEYMDMKPG VSYAVPPKAD KKRPVKSGSY
TDQDVALSMP EDDELALDVE DLLSFSYQVA KGMSFLASKN CIHRDLAARN ILLTHGRITK
ICDFGLARDI RNDSNYVVKG NARLPVKWMA PESIFNCVYT FESDVWSYGI LLWELFSLGS
SPYPGIPVDS KFYKMIKEGY RMFSPECAPP EMYDIMKSCW DADPLQRPTF KQIVQMIEQQ
LSENAPRVYA NFSTPPSSQG NAPDHSVRIN SVGSSASSTQ PLLVREDV


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