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Keratin, type I cytoskeletal 20 (Cytokeratin-20) (CK-20) (Keratin-20) (K20) (Protein IT)

 K1C20_HUMAN             Reviewed;         424 AA.
P35900; B2R6W7;
01-JUN-1994, integrated into UniProtKB/Swiss-Prot.
01-JUN-1994, sequence version 1.
25-OCT-2017, entry version 160.
RecName: Full=Keratin, type I cytoskeletal 20;
AltName: Full=Cytokeratin-20;
Short=CK-20;
AltName: Full=Keratin-20;
Short=K20;
AltName: Full=Protein IT;
Name=KRT20;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA], AND DEVELOPMENTAL STAGE.
TISSUE=Intestine;
PubMed=8359595; DOI=10.1111/j.1432-0436.1993.tb00648.x;
Moll R., Zimbelmann R., Goldschmidt M.D., Keith M., Laufer J.,
Kasper M., Koch P.J., Franke W.W.;
"The human gene encoding cytokeratin 20 and its expression during
fetal development and in gastrointestinal carcinomas.";
Differentiation 53:75-93(1993).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT ASN-129.
TISSUE=Small intestine;
PubMed=14702039; DOI=10.1038/ng1285;
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A.,
Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M.,
Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y.,
Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M.,
Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K.,
Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S.,
Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J.,
Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y.,
Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N.,
Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S.,
Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y.,
Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T.,
Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y.,
Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S.,
Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T.,
Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M.,
Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T.,
Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K.,
Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R.,
Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human
cDNAs.";
Nat. Genet. 36:40-45(2004).
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[4]
PROTEIN SEQUENCE OF 11-28, FUNCTION, INTERACTION WITH KRT8,
PHOSPHORYLATION AT SER-13, CLEAVAGE AT ASP-228, AND MUTAGENESIS OF
SER-13 AND SER-14.
PubMed=16608857; DOI=10.1074/jbc.M512284200;
Zhou Q., Cadrin M., Herrmann H., Chen C.-H., Chalkley R.J.,
Burlingame A.L., Omary M.B.;
"Keratin 20 serine 13 phosphorylation is a stress and intestinal
goblet cell marker.";
J. Biol. Chem. 281:16453-16461(2006).
[5]
NUCLEOTIDE SEQUENCE [MRNA] OF 86-424.
TISSUE=Intestine;
PubMed=7689500; DOI=10.1111/j.1432-0436.1993.tb00649.x;
Calnek D., Quaroni A.;
"Differential localization by in situ hybridization of distinct
keratin mRNA species during intestinal epithelial cell development and
differentiation.";
Differentiation 53:95-104(1993).
[6]
IDENTIFICATION, SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
PubMed=1696264; DOI=10.1083/jcb.111.2.567;
Moll R., Schiller D.L., Franke W.W.;
"Identification of protein IT of the intestinal cytoskeleton as a
novel type I cytokeratin with unusual properties and expression
patterns.";
J. Cell Biol. 111:567-580(1990).
[7]
INTERACTION WITH KRT8, SUBCELLULAR LOCATION, AND TISSUE SPECIFICITY.
PubMed=10973561; DOI=10.1016/S0003-9969(00)00050-9;
Barrett A.W., Cort E.M., Patel P., Berkovitz B.K.B.;
"An immunohistological study of cytokeratin 20 in human and mammalian
oral epithelium.";
Arch. Oral Biol. 45:879-887(2000).
[8]
FUNCTION, AND MUTAGENESIS OF ARG-80.
PubMed=12857878; DOI=10.1091/mbc.E03-02-0059;
Zhou Q., Toivola D.M., Feng N., Greenberg H.B., Franke W.W.,
Omary M.B.;
"Keratin 20 helps maintain intermediate filament organization in
intestinal epithelia.";
Mol. Biol. Cell 14:2959-2971(2003).
[9]
VARIANT [LARGE SCALE ANALYSIS] ARG-4.
PubMed=16959974; DOI=10.1126/science.1133427;
Sjoeblom T., Jones S., Wood L.D., Parsons D.W., Lin J., Barber T.D.,
Mandelker D., Leary R.J., Ptak J., Silliman N., Szabo S.,
Buckhaults P., Farrell C., Meeh P., Markowitz S.D., Willis J.,
Dawson D., Willson J.K.V., Gazdar A.F., Hartigan J., Wu L., Liu C.,
Parmigiani G., Park B.H., Bachman K.E., Papadopoulos N.,
Vogelstein B., Kinzler K.W., Velculescu V.E.;
"The consensus coding sequences of human breast and colorectal
cancers.";
Science 314:268-274(2006).
[10]
VARIANT CYS-214.
PubMed=21248752; DOI=10.1038/nature09639;
Varela I., Tarpey P., Raine K., Huang D., Ong C.K., Stephens P.,
Davies H., Jones D., Lin M.L., Teague J., Bignell G., Butler A.,
Cho J., Dalgliesh G.L., Galappaththige D., Greenman C., Hardy C.,
Jia M., Latimer C., Lau K.W., Marshall J., McLaren S., Menzies A.,
Mudie L., Stebbings L., Largaespada D.A., Wessels L.F.A., Richard S.,
Kahnoski R.J., Anema J., Tuveson D.A., Perez-Mancera P.A.,
Mustonen V., Fischer A., Adams D.J., Rust A., Chan-On W., Subimerb C.,
Dykema K., Furge K., Campbell P.J., Teh B.T., Stratton M.R.,
Futreal P.A.;
"Exome sequencing identifies frequent mutation of the SWI/SNF complex
gene PBRM1 in renal carcinoma.";
Nature 469:539-542(2011).
-!- FUNCTION: Plays a significant role in maintaining keratin filament
organization in intestinal epithelia. When phosphorylated, plays a
role in the secretion of mucin in the small intestine (By
similarity). {ECO:0000250, ECO:0000269|PubMed:12857878,
ECO:0000269|PubMed:16608857}.
-!- SUBUNIT: Heterotetramer of two type I and two type II keratins.
Associates with KRT8.
-!- INTERACTION:
Q9Y2J4-4:AMOTL2; NbExp=3; IntAct=EBI-742094, EBI-10187270;
Q9BUW7:C9orf16; NbExp=8; IntAct=EBI-742094, EBI-752084;
A1A4E9:KRT13; NbExp=3; IntAct=EBI-742094, EBI-10171552;
P19012:KRT15; NbExp=4; IntAct=EBI-742094, EBI-739566;
Q6A162:KRT40; NbExp=3; IntAct=EBI-742094, EBI-10171697;
Q6KB66:KRT80; NbExp=3; IntAct=EBI-742094, EBI-3046635;
P60409:KRTAP10-7; NbExp=3; IntAct=EBI-742094, EBI-10172290;
P60410:KRTAP10-8; NbExp=5; IntAct=EBI-742094, EBI-10171774;
P60411:KRTAP10-9; NbExp=3; IntAct=EBI-742094, EBI-10172052;
Q7Z3S9:NOTCH2NL; NbExp=3; IntAct=EBI-742094, EBI-945833;
P37198:NUP62; NbExp=5; IntAct=EBI-742094, EBI-347978;
O00459:PIK3R2; NbExp=3; IntAct=EBI-742094, EBI-346930;
Q9UBB9:TFIP11; NbExp=6; IntAct=EBI-742094, EBI-1105213;
P40222:TXLNA; NbExp=5; IntAct=EBI-742094, EBI-359793;
Q8N6Y0:USHBP1; NbExp=3; IntAct=EBI-742094, EBI-739895;
P08670:VIM; NbExp=6; IntAct=EBI-742094, EBI-353844;
-!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:10973561,
ECO:0000269|PubMed:1696264}.
-!- TISSUE SPECIFICITY: Expressed predominantly in the intestinal
epithelium. Expressed in luminal cells of colonic mucosa. Also
expressed in the Merkel cells of keratinized oral mucosa;
specifically at the tips of some rete ridges of the gingival
mucosa, in the basal layer of the palatal mucosa and in the taste
buds of lingual mucosa. {ECO:0000269|PubMed:10973561,
ECO:0000269|PubMed:1696264}.
-!- DEVELOPMENTAL STAGE: First detected at embryonic week 8 in
individual 'converted' simple epithelial cells of the developing
intestinal mucosa. In later fetal stages, synthesis extends over
most goblet cells and a variable number of villus enterocytes. In
the developing gastric and intestinal mucosa, expressed in all
enterocytes and goblet cells as well as certain 'low-
differentiated' columnar cells, whereas the neuroendocrine and
Paneth cells are negative. {ECO:0000269|PubMed:8359595}.
-!- PTM: Hyperphosphorylation at Ser-13 occurs during the early stages
of apoptosis but becomes less prominent during the later stages.
Phosphorylation at Ser-13 also increases in response to stress
brought on by cell injury (By similarity). {ECO:0000250}.
-!- PTM: Proteolytically cleaved by caspases during apoptosis.
Cleavage occurs at Asp-228. {ECO:0000269|PubMed:16608857}.
-!- MISCELLANEOUS: There are two types of cytoskeletal and
microfibrillar keratin: I (acidic; 40-55 kDa) and II (neutral to
basic; 56-70 kDa).
-!- SIMILARITY: Belongs to the intermediate filament family.
{ECO:0000255|PROSITE-ProRule:PRU01188}.
-----------------------------------------------------------------------
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-----------------------------------------------------------------------
EMBL; X73501; CAA51913.1; -; Genomic_DNA.
EMBL; AK312744; BAG35614.1; -; mRNA.
EMBL; BC031559; AAH31559.1; -; mRNA.
EMBL; X73502; CAA51914.1; -; mRNA.
CCDS; CCDS11379.1; -.
PIR; S37780; S37780.
RefSeq; NP_061883.1; NM_019010.2.
UniGene; Hs.84905; -.
ProteinModelPortal; P35900; -.
SMR; P35900; -.
BioGrid; 119979; 28.
IntAct; P35900; 43.
MINT; MINT-1445560; -.
STRING; 9606.ENSP00000167588; -.
iPTMnet; P35900; -.
PhosphoSitePlus; P35900; -.
SwissPalm; P35900; -.
BioMuta; KRT20; -.
DMDM; 547750; -.
PaxDb; P35900; -.
PeptideAtlas; P35900; -.
PRIDE; P35900; -.
DNASU; 54474; -.
Ensembl; ENST00000167588; ENSP00000167588; ENSG00000171431.
Ensembl; ENST00000576098; ENSP00000460501; ENSG00000263057.
GeneID; 54474; -.
KEGG; hsa:54474; -.
UCSC; uc002hvl.4; human.
CTD; 54474; -.
DisGeNET; 54474; -.
EuPathDB; HostDB:ENSG00000171431.3; -.
GeneCards; KRT20; -.
HGNC; HGNC:20412; KRT20.
HPA; CAB000032; -.
HPA; HPA024309; -.
HPA; HPA024684; -.
HPA; HPA027236; -.
MIM; 608218; gene.
neXtProt; NX_P35900; -.
OpenTargets; ENSG00000171431; -.
PharmGKB; PA134938907; -.
eggNOG; ENOG410IVBB; Eukaryota.
eggNOG; ENOG410YGAC; LUCA.
GeneTree; ENSGT00900000140890; -.
HOGENOM; HOG000230975; -.
HOVERGEN; HBG013015; -.
InParanoid; P35900; -.
KO; K07604; -.
OMA; KYETERG; -.
OrthoDB; EOG091G087I; -.
PhylomeDB; P35900; -.
TreeFam; TF332742; -.
Reactome; R-HSA-6805567; Keratinization.
Reactome; R-HSA-6809371; Formation of the cornified envelope.
GeneWiki; Keratin_20; -.
GenomeRNAi; 54474; -.
PRO; PR:P35900; -.
Proteomes; UP000005640; Chromosome 17.
Bgee; ENSG00000171431; -.
CleanEx; HS_KRT20; -.
Genevisible; P35900; HS.
GO; GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO; GO:0005829; C:cytosol; IDA:HPA.
GO; GO:0005882; C:intermediate filament; NAS:UniProtKB.
GO; GO:0005200; F:structural constituent of cytoskeleton; NAS:UniProtKB.
GO; GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
GO; GO:0033554; P:cellular response to stress; IEA:Ensembl.
GO; GO:0070268; P:cornification; TAS:Reactome.
GO; GO:0045109; P:intermediate filament organization; IMP:UniProtKB.
GO; GO:0031424; P:keratinization; TAS:Reactome.
GO; GO:0050708; P:regulation of protein secretion; IEA:Ensembl.
InterPro; IPR001664; IF.
InterPro; IPR018039; Intermediate_filament_CS.
InterPro; IPR002957; Keratin_I.
PANTHER; PTHR23239; PTHR23239; 1.
Pfam; PF00038; Filament; 1.
PRINTS; PR01248; TYPE1KERATIN.
SMART; SM01391; Filament; 1.
PROSITE; PS00226; IF_ROD_1; 1.
PROSITE; PS51842; IF_ROD_2; 1.
1: Evidence at protein level;
Apoptosis; Coiled coil; Complete proteome; Cytoplasm;
Direct protein sequencing; Intermediate filament; Keratin;
Phosphoprotein; Polymorphism; Reference proteome.
CHAIN 1 424 Keratin, type I cytoskeletal 20.
/FTId=PRO_0000063675.
DOMAIN 70 381 IF rod. {ECO:0000255|PROSITE-
ProRule:PRU01188}.
REGION 1 69 Head.
REGION 70 105 Coil 1A.
REGION 106 123 Linker 1.
REGION 124 215 Coil 1B.
REGION 216 238 Linker 12.
REGION 239 377 Coil 2.
REGION 378 424 Tail.
SITE 228 229 Cleavage; by caspases.
MOD_RES 13 13 Phosphoserine; by MAPKAPK2, MAPKAPK3 and
PKC. {ECO:0000269|PubMed:16608857}.
VARIANT 4 4 S -> R (in a colorectal cancer sample;
somatic mutation).
{ECO:0000269|PubMed:16959974}.
/FTId=VAR_036367.
VARIANT 129 129 S -> N (in dbSNP:rs7212483).
{ECO:0000269|PubMed:14702039}.
/FTId=VAR_024489.
VARIANT 214 214 G -> C (found in a renal cell carcinoma
sample; somatic mutation).
{ECO:0000269|PubMed:21248752}.
/FTId=VAR_064726.
MUTAGEN 13 13 S->A: Promotes keratin filament
disassembly.
{ECO:0000269|PubMed:16608857}.
MUTAGEN 14 14 S->A: No effect on keratin filament
organization.
{ECO:0000269|PubMed:16608857}.
MUTAGEN 80 80 R->H: Leads to collapsed filaments.
{ECO:0000269|PubMed:12857878}.
CONFLICT 161 161 T -> S (in Ref. 5; CAA51914).
{ECO:0000305}.
CONFLICT 349 349 Q -> P (in Ref. 5; CAA51914).
{ECO:0000305}.
CONFLICT 398 398 R -> T (in Ref. 5; CAA51914).
{ECO:0000305}.
SEQUENCE 424 AA; 48487 MW; A8EF5A518C73CCE5 CRC64;
MDFSRRSFHR SLSSSLQAPV VSTVGMQRLG TTPSVYGGAG GRGIRISNSR HTVNYGSDLT
GGGDLFVGNE KMAMQNLNDR LASYLEKVRT LEQSNSKLEV QIKQWYETNA PRAGRDYSAY
YRQIEELRSQ IKDAQLQNAR CVLQIDNAKL AAEDFRLKYE TERGIRLTVE ADLQGLNKVF
DDLTLHKTDL EIQIEELNKD LALLKKEHQE EVDGLHKHLG NTVNVEVDAA PGLNLGVIMN
EMRQKYEVMA QKNLQEAKEQ FERQTAVLQQ QVTVNTEELK GTEVQLTELR RTSQSLEIEL
QSHLSMKESL EHTLEETKAR YSSQLANLQS LLSSLEAQLM QIRSNMERQN NEYHILLDIK
TRLEQEIATY RRLLEGEDVK TTEYQLSTLE ERDIKKTRKI KTVVQEVVDG KVVSSEVKEV
EENI


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