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Kinesin-like protein KIN-14D (AtKIN14b)

 KN14D_ARATH             Reviewed;         790 AA.
F4JGP4; Q0WP75; Q6NQ77; Q9M0X6;
28-NOV-2012, integrated into UniProtKB/Swiss-Prot.
28-JUN-2011, sequence version 1.
25-OCT-2017, entry version 54.
RecName: Full=Kinesin-like protein KIN-14D {ECO:0000305};
AltName: Full=AtKIN14b {ECO:0000303|PubMed:18088313};
Name=KIN14D {ECO:0000305};
Synonyms=ATK5 {ECO:0000303|PubMed:15659646};
OrderedLocusNames=At4g05190 {ECO:0000312|Araport:AT4G05190};
ORFNames=C17L7.110 {ECO:0000312|EMBL:AC012392},
C6L9.1 {ECO:0000312|EMBL:CAB81061.1};
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia;
PubMed=10617198; DOI=10.1038/47134;
Mayer K.F.X., Schueller C., Wambutt R., Murphy G., Volckaert G.,
Pohl T., Duesterhoeft A., Stiekema W., Entian K.-D., Terryn N.,
Harris B., Ansorge W., Brandt P., Grivell L.A., Rieger M.,
Weichselgartner M., de Simone V., Obermaier B., Mache R., Mueller M.,
Kreis M., Delseny M., Puigdomenech P., Watson M., Schmidtheini T.,
Reichert B., Portetelle D., Perez-Alonso M., Boutry M., Bancroft I.,
Vos P., Hoheisel J., Zimmermann W., Wedler H., Ridley P.,
Langham S.-A., McCullagh B., Bilham L., Robben J.,
van der Schueren J., Grymonprez B., Chuang Y.-J., Vandenbussche F.,
Braeken M., Weltjens I., Voet M., Bastiaens I., Aert R., Defoor E.,
Weitzenegger T., Bothe G., Ramsperger U., Hilbert H., Braun M.,
Holzer E., Brandt A., Peters S., van Staveren M., Dirkse W.,
Mooijman P., Klein Lankhorst R., Rose M., Hauf J., Koetter P.,
Berneiser S., Hempel S., Feldpausch M., Lamberth S., Van den Daele H.,
De Keyser A., Buysshaert C., Gielen J., Villarroel R., De Clercq R.,
van Montagu M., Rogers J., Cronin A., Quail M.A., Bray-Allen S.,
Clark L., Doggett J., Hall S., Kay M., Lennard N., McLay K., Mayes R.,
Pettett A., Rajandream M.A., Lyne M., Benes V., Rechmann S.,
Borkova D., Bloecker H., Scharfe M., Grimm M., Loehnert T.-H.,
Dose S., de Haan M., Maarse A.C., Schaefer M., Mueller-Auer S.,
Gabel C., Fuchs M., Fartmann B., Granderath K., Dauner D., Herzl A.,
Neumann S., Argiriou A., Vitale D., Liguori R., Piravandi E.,
Massenet O., Quigley F., Clabauld G., Muendlein A., Felber R.,
Schnabl S., Hiller R., Schmidt W., Lecharny A., Aubourg S.,
Chefdor F., Cooke R., Berger C., Monfort A., Casacuberta E.,
Gibbons T., Weber N., Vandenbol M., Bargues M., Terol J., Torres A.,
Perez-Perez A., Purnelle B., Bent E., Johnson S., Tacon D., Jesse T.,
Heijnen L., Schwarz S., Scholler P., Heber S., Francs P., Bielke C.,
Frishman D., Haase D., Lemcke K., Mewes H.-W., Stocker S.,
Zaccaria P., Bevan M., Wilson R.K., de la Bastide M., Habermann K.,
Parnell L., Dedhia N., Gnoj L., Schutz K., Huang E., Spiegel L.,
Sekhon M., Murray J., Sheet P., Cordes M., Abu-Threideh J.,
Stoneking T., Kalicki J., Graves T., Harmon G., Edwards J.,
Latreille P., Courtney L., Cloud J., Abbott A., Scott K., Johnson D.,
Minx P., Bentley D., Fulton B., Miller N., Greco T., Kemp K.,
Kramer J., Fulton L., Mardis E., Dante M., Pepin K., Hillier L.W.,
Nelson J., Spieth J., Ryan E., Andrews S., Geisel C., Layman D.,
Du H., Ali J., Berghoff A., Jones K., Drone K., Cotton M., Joshu C.,
Antonoiu B., Zidanic M., Strong C., Sun H., Lamar B., Yordan C.,
Ma P., Zhong J., Preston R., Vil D., Shekher M., Matero A., Shah R.,
Swaby I.K., O'Shaughnessy A., Rodriguez M., Hoffman J., Till S.,
Granat S., Shohdy N., Hasegawa A., Hameed A., Lodhi M., Johnson A.,
Chen E., Marra M.A., Martienssen R., McCombie W.R.;
"Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana.";
Nature 402:769-777(1999).
[2]
GENOME REANNOTATION.
STRAIN=cv. Columbia;
The Arabidopsis Information Portal (Araport);
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
Shinn P., Chen H., Cheuk R.F., Kim C.J., Carninci P., Hayashizaki Y.,
Ishida J., Kamiya A., Kawai J., Narusaka M., Sakurai T., Satou M.,
Seki M., Shinozaki K., Ecker J.R.;
"Arabidopsis ORF clones.";
Submitted (SEP-2003) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
STRAIN=cv. Columbia;
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
Hayashizaki Y., Shinozaki K.;
"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases.
[5]
GENE FAMILY.
PubMed=11472632; DOI=10.1186/1471-2164-2-2;
Reddy A.S., Day I.S.;
"Kinesins in the Arabidopsis genome: a comparative analysis among
eukaryotes.";
BMC Genomics 2:2-2(2001).
[6]
FUNCTION, SUBCELLULAR LOCATION, AND DISRUPTION PHENOTYPE.
PubMed=15659646; DOI=10.1091/mbc.E04-10-0935;
Ambrose J.C., Li W., Marcus A., Ma H., Cyr R.;
"A minus-end-directed kinesin with plus-end tracking protein activity
is involved in spindle morphogenesis.";
Mol. Biol. Cell 16:1584-1592(2005).
[7]
GENE FAMILY, AND NOMENCLATURE.
PubMed=16448571; DOI=10.1186/1471-2164-7-18;
Richardson D.N., Simmons M.P., Reddy A.S.;
"Comprehensive comparative analysis of kinesins in photosynthetic
eukaryotes.";
BMC Genomics 7:18-18(2006).
[8]
FUNCTION, SUBCELLULAR LOCATION, AND DISRUPTION PHENOTYPE.
PubMed=17220198; DOI=10.1105/tpc.106.047613;
Ambrose J.C., Cyr R.;
"The kinesin ATK5 functions in early spindle assembly in
Arabidopsis.";
Plant Cell 19:226-236(2007).
[9]
FUNCTION, TISSUE SPECIFICITY, AND DISRUPTION PHENOTYPE.
PubMed=18088313; DOI=10.1111/j.1365-313X.2007.03391.x;
Quan L., Xiao R., Li W., Oh S.A., Kong H., Ambrose J.C., Malcos J.L.,
Cyr R., Twell D., Ma H.;
"Functional divergence of the duplicated AtKIN14a and AtKIN14b genes:
critical roles in Arabidopsis meiosis and gametophyte development.";
Plant J. 53:1013-1026(2008).
[10]
REVIEW.
PubMed=22038119; DOI=10.1007/s00709-011-0343-9;
Zhu C., Dixit R.;
"Functions of the Arabidopsis kinesin superfamily of microtubule-based
motor proteins.";
Protoplasma 249:887-899(2012).
-!- FUNCTION: Kinesin that supports microtubule movement in an ATP-
dependent manner and that functions as a minus-end directed motor
as well as a plus-end tracking protein. During mitosis, is
involved in early spindle assembly. Participates in the capture of
antiparallel interpolar microtubules and helps in generating force
to coalign microtubules. {ECO:0000269|PubMed:15659646,
ECO:0000269|PubMed:17220198, ECO:0000269|PubMed:18088313}.
-!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton. Cytoplasm,
cytoskeleton, phragmoplast. Note=In interphase, is enriched
specifically at growing microtubule plus-ends. In dividing cells,
accumulates in spindle midzones and phragmoplast leading edges.
-!- TISSUE SPECIFICITY: Slightly expressed in anther lobes with pollen
mother cells at anther stage 5. Strongly expressed at anther stage
6 in the tapetum and meiotic cells. Also detected in the gynoecium
and the ovule. {ECO:0000269|PubMed:18088313}.
-!- DOMAIN: Composed of three structural domains; a small globular N-
terminal, a central alpha-helical coiled coil and a large globular
C-terminal which is responsible for the motor activity (it
hydrolyzes ATP and binds microtubules). {ECO:0000250}.
-!- DISRUPTION PHENOTYPE: No visible phenotype under normal growth
conditions, but dividing cells of mutant plants exhibit abnormally
broadened mitotic spindles in metaphase and anaphase. However,
this does not affect chromosome alignment and segregation. Kin14c
and kin14d double mutant is gametophytically lethal
(PubMed:18088313). {ECO:0000269|PubMed:15659646,
ECO:0000269|PubMed:17220198, ECO:0000269|PubMed:18088313}.
-!- MISCELLANEOUS: By measuring the velocity of microtubule
translocation, the speed of ATK5 was determined to be 6.30 um/min
at 20 degrees Celsius. {ECO:0000305|PubMed:15659646}.
-!- SIMILARITY: Belongs to the TRAFAC class myosin-kinesin ATPase
superfamily. Kinesin family. KIN-14 subfamily.
{ECO:0000303|PubMed:16448571}.
-!- SEQUENCE CAUTION:
Sequence=CAB81061.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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EMBL; AC012392; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AL161503; CAB81061.1; ALT_SEQ; Genomic_DNA.
EMBL; CP002687; AEE82489.1; -; Genomic_DNA.
EMBL; BT010582; AAQ82843.1; -; mRNA.
EMBL; AK175713; BAD43476.1; -; mRNA.
EMBL; AK229204; BAF01074.1; -; mRNA.
PIR; C85065; C85065.
RefSeq; NP_001329202.1; NM_001340542.1.
RefSeq; NP_192428.2; NM_116758.4.
UniGene; At.33907; -.
ProteinModelPortal; F4JGP4; -.
SMR; F4JGP4; -.
STRING; 3702.AT4G05190.1; -.
iPTMnet; F4JGP4; -.
PaxDb; F4JGP4; -.
EnsemblPlants; AT4G05190.1; AT4G05190.1; AT4G05190.
GeneID; 825867; -.
Gramene; AT4G05190.1; AT4G05190.1; AT4G05190.
KEGG; ath:AT4G05190; -.
Araport; AT4G05190; -.
TAIR; locus:2115713; AT4G05190.
eggNOG; KOG0239; Eukaryota.
eggNOG; COG5059; LUCA.
HOGENOM; HOG000116164; -.
InParanoid; F4JGP4; -.
KO; K10405; -.
OMA; GSTEECG; -.
OrthoDB; EOG0936041R; -.
PRO; PR:F4JGP4; -.
Proteomes; UP000006548; Chromosome 4.
ExpressionAtlas; F4JGP4; baseline and differential.
Genevisible; F4JGP4; AT.
GO; GO:0005871; C:kinesin complex; IBA:GO_Central.
GO; GO:0005634; C:nucleus; IDA:TAIR.
GO; GO:0009524; C:phragmoplast; IEA:UniProtKB-SubCell.
GO; GO:0005876; C:spindle microtubule; IDA:TAIR.
GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO; GO:0016887; F:ATPase activity; IBA:GO_Central.
GO; GO:0008017; F:microtubule binding; IEA:InterPro.
GO; GO:0003777; F:microtubule motor activity; IMP:TAIR.
GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
GO; GO:0000226; P:microtubule cytoskeleton organization; IMP:TAIR.
GO; GO:0007018; P:microtubule-based movement; IBA:GO_Central.
GO; GO:0051225; P:spindle assembly; IMP:TAIR.
Gene3D; 3.40.850.10; -; 1.
InterPro; IPR027640; Kinesin-like_fam.
InterPro; IPR019821; Kinesin_motor_CS.
InterPro; IPR001752; Kinesin_motor_dom.
InterPro; IPR036961; Kinesin_motor_dom_sf.
InterPro; IPR027417; P-loop_NTPase.
PANTHER; PTHR24115; PTHR24115; 1.
Pfam; PF00225; Kinesin; 1.
PRINTS; PR00380; KINESINHEAVY.
SMART; SM00129; KISc; 1.
SUPFAM; SSF52540; SSF52540; 1.
PROSITE; PS00411; KINESIN_MOTOR_1; 1.
PROSITE; PS50067; KINESIN_MOTOR_2; 1.
2: Evidence at transcript level;
ATP-binding; Cell cycle; Cell division; Coiled coil;
Complete proteome; Cytoplasm; Cytoskeleton; Microtubule; Mitosis;
Motor protein; Nucleotide-binding; Reference proteome.
CHAIN 1 790 Kinesin-like protein KIN-14D.
/FTId=PRO_0000420251.
DOMAIN 428 769 Kinesin motor. {ECO:0000255|PROSITE-
ProRule:PRU00283}.
NP_BIND 513 520 ATP. {ECO:0000255|PROSITE-
ProRule:PRU00283}.
REGION 1 66 Globular.
COILED 117 316 {ECO:0000255}.
COILED 347 426 {ECO:0000255}.
CONFLICT 31 31 K -> E (in Ref. 3; AAQ82843 and 4;
BAD43476). {ECO:0000305}.
CONFLICT 739 739 K -> E (in Ref. 3; AAQ82843 and 4;
BAD43476). {ECO:0000305}.
SEQUENCE 790 AA; 89194 MW; 9F347A6FD125906D CRC64;
MPLRNQNRAP LPSPNVKKEA LSSIPFDKRR KETQGTGRRQ VLSTVNRQDA NSDVGSTEEC
GKVEFTKDEV LALLNERAKA GKFDTKGKIE QMTDIIKKLK VCVRWYQQVD ETHVQDKENL
SSSLQSAEKR YSDKELDAKT KEEELRATIT EMKENIESLQ EKLSKEKLSK LDAIENHRRE
KDCRVVAEKL QVSLREELDK VKEEKMAAKQ KVTSLEDMYK RLQEYNTSLQ QYNTKLQTDL
EVAREAHTRA EKEKSSILEN LTTLRGHSKS LQDQLASSRV SQDEAVKQKD SLLMEVNNLQ
SELQQVRDDR DRHVVQSQKL AGEILMYKES VGKSSHELDI LIAKSGSLEE TCSLQKERIK
MLEQELAFAK EKLKMVDLSM SHTMTEFEEQ KQCMHELQDR LADTERQLFE GELLRKKLHN
TILELKGNIR VFCRVRPLLP DDGGRQEASV IAYPTSTESL GRGIDVVQSG NKHPFTFDKV
FDHGASQEEV FFEISQLVQS ALDGYKVCIF AYGQTGSGKT YTMMGRPETP EQKGLIPRSL
EQIFKTSQSL STQGWKYKMQ VSMLEIYNES IRDLLSTSRT IAIESVRADS STSGRQYTIT
HDVNGNTHVS DLTIVDVCSI GQISSLLQQA AQSRSVGKTH MNEQSSRSHF VFTLRISGVN
ESTEQQVQGV LNLIDLAGSE RLSRSGATGD RLKETQAINK SLSALSDVIF ALAKKEDHVP
FRNSKLTYLL QPCLGGDSKT LMFVNISPDP SSTGESLCSL RFAARVNACE IGIPRRQTSA
KLLDSRLSYG


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