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Kruppel-like transcription factor neptune (LOC398243 protein)

 Q90XS5_XENLA            Unreviewed;       413 AA.
Q90XS5; Q6GR57;
01-DEC-2001, integrated into UniProtKB/TrEMBL.
01-DEC-2001, sequence version 1.
10-OCT-2018, entry version 88.
SubName: Full=Kruppel-like transcription factor neptune {ECO:0000313|EMBL:AAL10792.1};
SubName: Full=LOC398243 protein {ECO:0000313|EMBL:AAH71074.2};
Name=klf17 {ECO:0000313|Xenbase:XB-GENE-939946};
Synonyms=LOC398243 {ECO:0000313|EMBL:AAH71074.2};
ORFNames=XELAEV_18023103mg {ECO:0000313|EMBL:OCT84943.1};
Xenopus laevis (African clawed frog).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus;
Xenopus.
NCBI_TaxID=8355 {ECO:0000313|EMBL:AAL10792.1};
[1] {ECO:0000313|EMBL:AAL10792.1}
NUCLEOTIDE SEQUENCE.
PubMed=11566106; DOI=10.1016/S0960-9822(01)00427-4;
Huber T.L., Perkins A.C., Deconinck A.E., Chan F.Y., Mead P.E.,
Zon L.I.;
"neptune, a Kruppel-like transcription factor that participates in
primitive erythropoiesis in Xenopus.";
Curr. Biol. 11:1456-1461(2001).
[2] {ECO:0000313|EMBL:AAH71074.2}
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Embryo {ECO:0000313|EMBL:AAH71074.2};
NIH - Xenopus Gene Collection (XGC) project;
Submitted (MAY-2004) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|Proteomes:UP000186698}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=J {ECO:0000313|Proteomes:UP000186698};
PubMed=27762356; DOI=10.1038/nature19840;
Session A.M., Uno Y., Kwon T., Chapman J.A., Toyoda A., Takahashi S.,
Fukui A., Hikosaka A., Suzuki A., Kondo M., van Heeringen S.J.,
Quigley I., Heinz S., Ogino H., Ochi H., Hellsten U., Lyons J.B.,
Simakov O., Putnam N., Stites J., Kuroki Y., Tanaka T., Michiue T.,
Watanabe M., Bogdanovic O., Lister R., Georgiou G., Paranjpe S.S.,
van Kruijsbergen I., Shu S., Carlson J., Kinoshita T., Ohta Y.,
Mawaribuchi S., Jenkins J., Grimwood J., Schmutz J., Mitros T.,
Mozaffari S.V., Suzuki Y., Haramoto Y., Yamamoto T.S., Takagi C.,
Heald R., Miller K., Haudenschild C., Kitzman J., Nakayama T.,
Izutsu Y., Robert J., Fortriede J., Burns K., Lotay V., Karimi K.,
Yasuoka Y., Dichmann D.S., Flajnik M.F., Houston D.W., Shendure J.,
DuPasquier L., Vize P.D., Zorn A.M., Ito M., Marcotte E.M.,
Wallingford J.B., Ito Y., Asashima M., Ueno N., Matsuda Y.,
Veenstra G.J., Fujiyama A., Harland R.M., Taira M., Rokhsar D.S.;
"Genome evolution in the allotetraploid frog Xenopus laevis.";
Nature 538:336-343(2016).
[4] {ECO:0000313|EMBL:OCT84943.1}
NUCLEOTIDE SEQUENCE.
STRAIN=J {ECO:0000313|EMBL:OCT84943.1};
TISSUE=Blood {ECO:0000313|EMBL:OCT84943.1};
Session A., Uno Y., Kwon T., Chapman J., Toyoda A., Takahashi S.,
Fukui A., Hikosaka A., Putnam N., Stites J., Van Heeringen S.,
Quigley I., Heinz S., Hellsten U., Lyons J., Suzuki A., Kondo M.,
Ogino H., Ochi H., Bogdanovic O., Lister R., Georgiou G., Paranjpe S.,
Van Kruijsbergen I., Mozaffari S., Shu S., Schmutz J., Jenkins J.,
Grimwood J., Carlson J., Mitros T., Simakov O., Heald R., Miller K.,
Haudenschild C., Kuroki Y., Tanaka T., Michiue T., Watanabe M.,
Kinoshita T., Ohta Y., Mawaribuchi S., Suzuki Y., Haramoto Y.,
Yamamoto T., Takagi C., Kitzman J., Shendure J., Nakayama T.,
Izutsu Y., Robert J., Dichmann D., Flajnik M., Houston D.,
Marcotte E., Wallingford J., Ito Y., Asashima M., Ueno N., Matsuda Y.,
Jan Veenstra G., Fujiyama A., Harland R., Taira M., Rokhsar D.S.;
"WGS assembly of Xenopus laevis.";
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
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EMBL; BC071074; AAH71074.2; -; mRNA.
EMBL; AF353715; AAL10792.1; -; mRNA.
EMBL; CM004472; OCT84943.1; -; Genomic_DNA.
RefSeq; NP_001082133.1; NM_001088664.1.
UniGene; Xl.2206; -.
GeneID; 398243; -.
KEGG; xla:398243; -.
CTD; 398243; -.
Xenbase; XB-GENE-939946; klf17.
HOVERGEN; HBG006220; -.
Proteomes; UP000186698; Chromosome 4l.
GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
InterPro; IPR036236; Znf_C2H2_sf.
InterPro; IPR013087; Znf_C2H2_type.
Pfam; PF00096; zf-C2H2; 3.
SMART; SM00355; ZnF_C2H2; 3.
SUPFAM; SSF57667; SSF57667; 2.
PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
2: Evidence at transcript level;
Complete proteome {ECO:0000313|Proteomes:UP000186698};
Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
Reference proteome {ECO:0000313|Proteomes:UP000186698};
Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
DOMAIN 330 359 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
DOMAIN 360 389 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
DOMAIN 390 413 C2H2-type. {ECO:0000259|PROSITE:PS50157}.
SEQUENCE 413 AA; 46290 MW; D3EEEC2C711C8BA6 CRC64;
MSVAFSTLQP LEDKQLGMVS DMTMEELRPL ADMSYTMIEH CIKKEEDDLG KFVDLDFILA
HTSSSQNGGT PVGHGGPYPL PETPESCSTT YDSDGSYTAN QKYGGGSFAG SPHHSYVAEL
LTPDVPCIEV SPDFGLKASM HSRKYTELRV SAMDTTGHLS SDHLQHLSHK IKKERPEQSC
MLGAGSPTSP DCISPIMEQK AGIMQMHGQL LPNPAYSQHR LSPPVPTEDM PPNDCHMISE
LHCLPLMSMA QHYPMASPYP THFTSQPPAQ FHGQFGVYRD PMKVHPSMHG MIVTPPSSPL
LEYYPAMSAT DDCKPKRGRR SWARKRTATH SCEYPGCGKT YTKSSHLKAH MRTHTGEKPY
HCNWEGCGWK FARSDELTRH FRKHTGHRPF QCHLCERAFS RSDHLALHMK RHM


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