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LUC7-like 2 (LUC7-like 2 pre-mRNA splicing factor)

 H2QVH0_PANTR            Unreviewed;       392 AA.
H2QVH0;
21-MAR-2012, integrated into UniProtKB/TrEMBL.
21-MAR-2012, sequence version 1.
27-SEP-2017, entry version 42.
SubName: Full=LUC7-like 2 {ECO:0000313|EMBL:JAA04165.1};
SubName: Full=LUC7-like 2 pre-mRNA splicing factor {ECO:0000313|Ensembl:ENSPTRP00000033842};
Name=LOC739990 {ECO:0000313|Ensembl:ENSPTRP00000033842};
Synonyms=LUC7L2 {ECO:0000313|EMBL:JAA04165.1};
Pan troglodytes (Chimpanzee).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Pan.
NCBI_TaxID=9598 {ECO:0000313|Ensembl:ENSPTRP00000033842, ECO:0000313|Proteomes:UP000002277};
[1] {ECO:0000313|Ensembl:ENSPTRP00000033842, ECO:0000313|Proteomes:UP000002277}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=16136131; DOI=10.1038/nature04072;
Chimpanzee sequencing and analysis consortium;
"Initial sequence of the chimpanzee genome and comparison with the
human genome.";
Nature 437:69-87(2005).
[2] {ECO:0000313|Proteomes:UP000002277}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=16136134; DOI=10.1038/nature04101;
Hughes J.F., Skaletsky H., Pyntikova T., Minx P.J., Graves T.,
Rozen S., Wilson R.K., Page D.C.;
"Conservation of Y-linked genes during human evolution revealed by
comparative sequencing in chimpanzee.";
Nature 437:100-103(2005).
[3] {ECO:0000313|Ensembl:ENSPTRP00000033842}
IDENTIFICATION.
Ensembl;
Submitted (FEB-2012) to UniProtKB.
[4] {ECO:0000313|EMBL:JAA04165.1}
NUCLEOTIDE SEQUENCE.
TISSUE=Adipose stromal {ECO:0000313|EMBL:JAA04165.1},
Skeletal muscle {ECO:0000313|EMBL:JAA39186.1},
Skin {ECO:0000313|EMBL:JAA32078.1}, and
Smooth vascular {ECO:0000313|EMBL:JAA13770.1};
Maudhoo M.D., Meehan D.T., Norgren R.B.Jr.;
"De novo assembly of the reference chimpanzee transcriptome from
NextGen mRNA sequences.";
Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases.
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EMBL; AC187520; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AC192730; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; GABC01007173; JAA04165.1; -; mRNA.
EMBL; GABF01008375; JAA13770.1; -; mRNA.
EMBL; GABD01001022; JAA32078.1; -; mRNA.
EMBL; GABE01005553; JAA39186.1; -; mRNA.
RefSeq; XP_001151307.1; XM_001151307.4.
SMR; H2QVH0; -.
STRING; 9598.ENSPTRP00000033842; -.
Ensembl; ENSPTRT00000036601; ENSPTRP00000033842; ENSPTRG00000019755.
GeneID; 739990; -.
eggNOG; KOG0796; Eukaryota.
eggNOG; COG5200; LUCA.
GeneTree; ENSGT00730000110670; -.
OMA; DPKVCKS; -.
OrthoDB; EOG091G0PSO; -.
TreeFam; TF317607; -.
Proteomes; UP000002277; Chromosome 7.
Bgee; ENSPTRG00000019755; -.
GO; GO:0005685; C:U1 snRNP; IBA:GO_Central.
GO; GO:0071004; C:U2-type prespliceosome; IBA:GO_Central.
GO; GO:0019899; F:enzyme binding; IEA:Ensembl.
GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
GO; GO:0006376; P:mRNA splice site selection; IBA:GO_Central.
InterPro; IPR004882; Luc7-rel.
PANTHER; PTHR12375; PTHR12375; 1.
Pfam; PF03194; LUC7; 1.
2: Evidence at transcript level;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000002277};
Reference proteome {ECO:0000313|Proteomes:UP000002277}.
COILED 94 146 {ECO:0000256|SAM:Coils}.
COILED 149 172 {ECO:0000256|SAM:Coils}.
COILED 218 261 {ECO:0000256|SAM:Coils}.
SEQUENCE 392 AA; 46514 MW; 1C559CCE0F23F693 CRC64;
MSAQAQMRAM LDQLMGTSRD GDTTRQRIKF SDDRVCKSHL LNCCPHDVLS GTRMDLGECL
KVHDLALRAD YEIASKEQDF FFELDAMDHL QSFIADCDRR TEVAKKRLAE TQEEISAEVA
AKAERVHELN EEIGKLLAKV EQLGAEGNVE ESQKVMDEVE KARAKKREAE EVYRNSMPAS
SFQQQKLRVC EVCSAYLGLH DNDRRLADHF GGKLHLGFIE IREKLEELKR VVAEKQEKRN
QERLKRREER EREEREKLRR SRSHSKNPKR SRSREHRRHR SRSMSRERKR RTRSKSREKR
HRHRSRSSSR SRSRSHQRSR HSSRDRSRER SKRRSSKERF RDQDLASCDR DRSSRDRSPR
DRDRKDKKRS YESANGRSED RRSSEEREAG EI


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