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Lactosylceramide alpha-2,3-sialyltransferase (EC 2.4.99.9) (CMP-NeuAc:lactosylceramide alpha-2,3-sialyltransferase) (Ganglioside GM3 synthase) (ST3Gal V) (ST3GalV) (Sialyltransferase 9)

 SIAT9_RAT               Reviewed;         387 AA.
Q68G12; O88830;
20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
11-OCT-2004, sequence version 1.
28-MAR-2018, entry version 96.
RecName: Full=Lactosylceramide alpha-2,3-sialyltransferase;
EC=2.4.99.9;
AltName: Full=CMP-NeuAc:lactosylceramide alpha-2,3-sialyltransferase;
AltName: Full=Ganglioside GM3 synthase;
AltName: Full=ST3Gal V;
Short=ST3GalV;
AltName: Full=Sialyltransferase 9;
Name=St3gal5; Synonyms=Siat9;
Rattus norvegicus (Rat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
NCBI_TaxID=10116;
[1]
NUCLEOTIDE SEQUENCE [MRNA].
STRAIN=Sprague-Dawley; TISSUE=Brain;
Ishii A., Saito M.;
"Rat GM3 synthase cDNA.";
Submitted (SEP-1998) to the EMBL/GenBank/DDBJ databases.
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
TISSUE=Kidney;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
-!- FUNCTION: Catalyzes the formation of ganglioside GM3 (alpha-N-
acetylneuraminyl-2,3-beta-D-galactosyl-1, 4-beta-D-
glucosylceramide). {ECO:0000250}.
-!- CATALYTIC ACTIVITY: CMP-N-acetylneuraminate + beta-D-galactosyl-
(1->4)-beta-D-glucosyl-(1<->1)-ceramide = CMP + alpha-N-
acetylneuraminyl-(2->3)-beta-D-galactosyl-(1->4)-beta-D-glucosyl-
(1<->1)-ceramide.
-!- SUBCELLULAR LOCATION: Golgi apparatus membrane {ECO:0000305};
Single-pass type II membrane protein {ECO:0000305}.
-!- SIMILARITY: Belongs to the glycosyltransferase 29 family.
{ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=BAA33492.1; Type=Erroneous initiation; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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EMBL; AB018049; BAA33492.1; ALT_INIT; mRNA.
EMBL; BC078798; AAH78798.1; -; mRNA.
RefSeq; NP_112627.2; NM_031337.2.
RefSeq; XP_006236739.1; XM_006236677.1.
RefSeq; XP_006236741.1; XM_006236679.3.
RefSeq; XP_008761218.1; XM_008762996.1.
UniGene; Rn.22706; -.
SMR; Q68G12; -.
STRING; 10116.ENSRNOP00000042426; -.
CAZy; GT29; Glycosyltransferase Family 29.
PaxDb; Q68G12; -.
PRIDE; Q68G12; -.
Ensembl; ENSRNOT00000050249; ENSRNOP00000042426; ENSRNOG00000010284.
GeneID; 83505; -.
KEGG; rno:83505; -.
UCSC; RGD:620875; rat.
CTD; 8869; -.
RGD; 620875; St3gal5.
eggNOG; KOG2692; Eukaryota.
eggNOG; ENOG410XT8P; LUCA.
GeneTree; ENSGT00760000119095; -.
HOGENOM; HOG000000682; -.
HOVERGEN; HBG056676; -.
InParanoid; Q68G12; -.
KO; K03370; -.
OMA; YKYDPPF; -.
OrthoDB; EOG091G098L; -.
PhylomeDB; Q68G12; -.
Reactome; R-RNO-4085001; Sialic acid metabolism.
PRO; PR:Q68G12; -.
Proteomes; UP000002494; Chromosome 4.
Bgee; ENSRNOG00000010284; -.
ExpressionAtlas; Q68G12; baseline and differential.
Genevisible; Q68G12; RN.
GO; GO:0000139; C:Golgi membrane; IBA:GO_Central.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0047291; F:lactosylceramide alpha-2,3-sialyltransferase activity; ISS:UniProtKB.
GO; GO:0009311; P:oligosaccharide metabolic process; IBA:GO_Central.
GO; GO:0018279; P:protein N-linked glycosylation via asparagine; IBA:GO_Central.
Gene3D; 3.90.1480.20; -; 1.
InterPro; IPR001675; Glyco_trans_29.
InterPro; IPR038578; GT29-like_sf.
InterPro; IPR012163; Sialyl_trans.
Pfam; PF00777; Glyco_transf_29; 1.
PIRSF; PIRSF005557; Sialyl_trans; 1.
2: Evidence at transcript level;
Complete proteome; Disulfide bond; Glycoprotein; Glycosyltransferase;
Golgi apparatus; Membrane; Reference proteome; Signal-anchor;
Transferase; Transmembrane; Transmembrane helix.
CHAIN 1 387 Lactosylceramide alpha-2,3-
sialyltransferase.
/FTId=PRO_0000334618.
TOPO_DOM 1 33 Cytoplasmic. {ECO:0000255}.
TRANSMEM 34 54 Helical; Signal-anchor for type II
membrane protein. {ECO:0000255}.
TOPO_DOM 55 387 Extracellular. {ECO:0000255}.
CARBOHYD 58 58 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
CARBOHYD 208 208 N-linked (GlcNAc...) asparagine.
{ECO:0000255}.
DISULFID 167 325 {ECO:0000250}.
SEQUENCE 387 AA; 44640 MW; BF53342B7E8C06EA CRC64;
MPNEFTSAKL RSDCSRTSLQ WYTQTQHKMR RPSLLLKDIL KCMLVVFGVW LLYILKLNYT
AEECDMKKLN YVDPARIKRA HRNTQEVFQK ECRPGHAKKT MDLLFKGKYS MDLEPFVQKI
PTASEAELKY DPPFGFRKFS SKVQSLLDML PEHDFPEHLR AKHCKRCVVI GNGGILHGLE
LGHALNQFDV VIRLNSAPIE GYSEHVGNKT TIRMTYPEGA PLSDAEYYAN DLFVAVLFKS
VDFKWLQAMV KNESLPFWIR LFFWKQVAEK IPLQPKHFRI LNPVIIKETA FDILQYSEPQ
SRFWGHDKNI PTIGIIAIVL ATHLCDEVSL AGFGYDLSQP RTPLHYFDSQ CMGAMNWQVM
HNVTTETQFL QKLIKEGVVQ DLSGGIH


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