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Leucine rich repeat kinase 2

 F7C7Z0_MACMU            Unreviewed;      2527 AA.
F7C7Z0;
27-JUL-2011, integrated into UniProtKB/TrEMBL.
30-NOV-2016, sequence version 2.
23-MAY-2018, entry version 59.
SubName: Full=Leucine rich repeat kinase 2 {ECO:0000313|Ensembl:ENSMMUP00000020845};
Name=LRRK2 {ECO:0000313|Ensembl:ENSMMUP00000020845};
Macaca mulatta (Rhesus macaque).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
NCBI_TaxID=9544 {ECO:0000313|Ensembl:ENSMMUP00000020845, ECO:0000313|Proteomes:UP000006718};
[1] {ECO:0000313|Ensembl:ENSMMUP00000020845, ECO:0000313|Proteomes:UP000006718}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=17573 {ECO:0000313|Ensembl:ENSMMUP00000020845,
ECO:0000313|Proteomes:UP000006718};
PubMed=17431167; DOI=10.1126/science.1139247;
Gibbs R.A., Rogers J., Katze M.G., Bumgarner R., Weinstock G.M.,
Mardis E.R., Remington K.A., Strausberg R.L., Venter J.C.,
Wilson R.K., Batzer M.A., Bustamante C.D., Eichler E.E., Hahn M.W.,
Hardison R.C., Makova K.D., Miller W., Milosavljevic A., Palermo R.E.,
Siepel A., Sikela J.M., Attaway T., Bell S., Bernard K.E., Buhay C.J.,
Chandrabose M.N., Dao M., Davis C., Delehaunty K.D., Ding Y.,
Dinh H.H., Dugan-Rocha S., Fulton L.A., Gabisi R.A., Garner T.T.,
Godfrey J., Hawes A.C., Hernandez J., Hines S., Holder M., Hume J.,
Jhangiani S.N., Joshi V., Khan Z.M., Kirkness E.F., Cree A.,
Fowler R.G., Lee S., Lewis L.R., Li Z., Liu Y.-S., Moore S.M.,
Muzny D., Nazareth L.V., Ngo D.N., Okwuonu G.O., Pai G., Parker D.,
Paul H.A., Pfannkoch C., Pohl C.S., Rogers Y.-H.C., Ruiz S.J.,
Sabo A., Santibanez J., Schneider B.W., Smith S.M., Sodergren E.,
Svatek A.F., Utterback T.R., Vattathil S., Warren W., White C.S.,
Chinwalla A.T., Feng Y., Halpern A.L., Hillier L.W., Huang X.,
Minx P., Nelson J.O., Pepin K.H., Qin X., Sutton G.G., Venter E.,
Walenz B.P., Wallis J.W., Worley K.C., Yang S.-P., Jones S.M.,
Marra M.A., Rocchi M., Schein J.E., Baertsch R., Clarke L., Csuros M.,
Glasscock J., Harris R.A., Havlak P., Jackson A.R., Jiang H., Liu Y.,
Messina D.N., Shen Y., Song H.X.-Z., Wylie T., Zhang L., Birney E.,
Han K., Konkel M.K., Lee J., Smit A.F.A., Ullmer B., Wang H., Xing J.,
Burhans R., Cheng Z., Karro J.E., Ma J., Raney B., She X., Cox M.J.,
Demuth J.P., Dumas L.J., Han S.-G., Hopkins J., Karimpour-Fard A.,
Kim Y.H., Pollack J.R., Vinar T., Addo-Quaye C., Degenhardt J.,
Denby A., Hubisz M.J., Indap A., Kosiol C., Lahn B.T., Lawson H.A.,
Marklein A., Nielsen R., Vallender E.J., Clark A.G., Ferguson B.,
Hernandez R.D., Hirani K., Kehrer-Sawatzki H., Kolb J., Patil S.,
Pu L.-L., Ren Y., Smith D.G., Wheeler D.A., Schenck I., Ball E.V.,
Chen R., Cooper D.N., Giardine B., Hsu F., Kent W.J., Lesk A.,
Nelson D.L., O'brien W.E., Pruefer K., Stenson P.D., Wallace J.C.,
Ke H., Liu X.-M., Wang P., Xiang A.P., Yang F., Barber G.P.,
Haussler D., Karolchik D., Kern A.D., Kuhn R.M., Smith K.E.,
Zwieg A.S.;
"Evolutionary and biomedical insights from the rhesus macaque
genome.";
Science 316:222-234(2007).
[2] {ECO:0000313|Ensembl:ENSMMUP00000020845}
IDENTIFICATION.
STRAIN=17573 {ECO:0000313|Ensembl:ENSMMUP00000020845};
Ensembl;
Submitted (JUL-2011) to UniProtKB.
-----------------------------------------------------------------------
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EMBL; JSUE03006549; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; JSUE03006550; -; NOT_ANNOTATED_CDS; Genomic_DNA.
RefSeq; XP_015006936.1; XM_015151450.1.
UniGene; Mmu.29837; -.
STRING; 9544.ENSMMUP00000020845; -.
Ensembl; ENSMMUT00000022280; ENSMMUP00000020845; ENSMMUG00000015857.
GeneID; 697930; -.
CTD; 120892; -.
eggNOG; ENOG410IRBK; Eukaryota.
eggNOG; KOG0192; Eukaryota.
eggNOG; COG1100; LUCA.
eggNOG; COG4886; LUCA.
GeneTree; ENSGT00910000144054; -.
InParanoid; F7C7Z0; -.
OrthoDB; EOG091G003N; -.
TreeFam; TF313679; -.
Proteomes; UP000006718; Chromosome 11.
Bgee; ENSMMUG00000015857; -.
GO; GO:0044753; C:amphisome; IEA:Ensembl.
GO; GO:0044754; C:autolysosome; IEA:Ensembl.
GO; GO:0099400; C:caveola neck; IEA:Ensembl.
GO; GO:0032473; C:cytoplasmic side of mitochondrial outer membrane; IEA:Ensembl.
GO; GO:0005829; C:cytosol; IEA:Ensembl.
GO; GO:0032839; C:dendrite cytoplasm; IEA:Ensembl.
GO; GO:0005783; C:endoplasmic reticulum; IEA:Ensembl.
GO; GO:0005798; C:Golgi-associated vesicle; IEA:Ensembl.
GO; GO:0030426; C:growth cone; IEA:Ensembl.
GO; GO:0016234; C:inclusion body; IEA:Ensembl.
GO; GO:0005622; C:intracellular; IBA:GO_Central.
GO; GO:0005902; C:microvillus; IEA:Ensembl.
GO; GO:0005743; C:mitochondrial inner membrane; IEA:Ensembl.
GO; GO:0005759; C:mitochondrial matrix; IEA:Ensembl.
GO; GO:0097487; C:multivesicular body, internal vesicle; IEA:Ensembl.
GO; GO:0005634; C:nucleus; IEA:Ensembl.
GO; GO:0043204; C:perikaryon; IEA:Ensembl.
GO; GO:0098794; C:postsynapse; IEA:GOC.
GO; GO:0008021; C:synaptic vesicle; IEA:Ensembl.
GO; GO:0005802; C:trans-Golgi network; IEA:Ensembl.
GO; GO:1990909; C:Wnt signalosome; IEA:Ensembl.
GO; GO:0003779; F:actin binding; IEA:Ensembl.
GO; GO:0005524; F:ATP binding; IEA:InterPro.
GO; GO:1904713; F:beta-catenin destruction complex binding; IEA:Ensembl.
GO; GO:0030276; F:clathrin binding; IEA:Ensembl.
GO; GO:0005525; F:GTP binding; IEA:Ensembl.
GO; GO:0034211; F:GTP-dependent protein kinase activity; IEA:Ensembl.
GO; GO:0005096; F:GTPase activator activity; IEA:Ensembl.
GO; GO:0003924; F:GTPase activity; IEA:Ensembl.
GO; GO:0044325; F:ion channel binding; IEA:Ensembl.
GO; GO:0004708; F:MAP kinase kinase activity; IEA:Ensembl.
GO; GO:0036479; F:peroxidase inhibitor activity; IEA:Ensembl.
GO; GO:0042803; F:protein homodimerization activity; IEA:Ensembl.
GO; GO:0051018; F:protein kinase A binding; IEA:Ensembl.
GO; GO:0004674; F:protein serine/threonine kinase activity; IBA:GO_Central.
GO; GO:0017048; F:Rho GTPase binding; IEA:Ensembl.
GO; GO:0004871; F:signal transducer activity; IBA:GO_Central.
GO; GO:0017075; F:syntaxin-1 binding; IEA:Ensembl.
GO; GO:0015631; F:tubulin binding; IEA:Ensembl.
GO; GO:0000186; P:activation of MAPKK activity; IEA:Ensembl.
GO; GO:0019722; P:calcium-mediated signaling; IEA:Ensembl.
GO; GO:0034613; P:cellular protein localization; IEA:Ensembl.
GO; GO:1903351; P:cellular response to dopamine; IEA:Ensembl.
GO; GO:0071287; P:cellular response to manganese ion; IEA:Ensembl.
GO; GO:0034599; P:cellular response to oxidative stress; IEA:Ensembl.
GO; GO:0009267; P:cellular response to starvation; IEA:Ensembl.
GO; GO:0008340; P:determination of adult lifespan; IEA:Ensembl.
GO; GO:0006897; P:endocytosis; IEA:Ensembl.
GO; GO:0060079; P:excitatory postsynaptic potential; IEA:Ensembl.
GO; GO:0007030; P:Golgi organization; IEA:Ensembl.
GO; GO:0046039; P:GTP metabolic process; IEA:Ensembl.
GO; GO:0048312; P:intracellular distribution of mitochondria; IEA:Ensembl.
GO; GO:0035556; P:intracellular signal transduction; IBA:GO_Central.
GO; GO:0035641; P:locomotory exploration behavior; IEA:Ensembl.
GO; GO:0007275; P:multicellular organism development; IBA:GO_Central.
GO; GO:0070266; P:necroptotic process; IBA:GO_Central.
GO; GO:1902902; P:negative regulation of autophagosome assembly; IEA:Ensembl.
GO; GO:1902236; P:negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway; IEA:Ensembl.
GO; GO:0090394; P:negative regulation of excitatory postsynaptic potential; IEA:Ensembl.
GO; GO:0034260; P:negative regulation of GTPase activity; IEA:Ensembl.
GO; GO:1903206; P:negative regulation of hydrogen peroxide-induced cell death; IEA:Ensembl.
GO; GO:1901215; P:negative regulation of neuron death; IEA:Ensembl.
GO; GO:0032091; P:negative regulation of protein binding; IEA:Ensembl.
GO; GO:0001933; P:negative regulation of protein phosphorylation; IEA:Ensembl.
GO; GO:0010955; P:negative regulation of protein processing; IEA:Ensembl.
GO; GO:1903215; P:negative regulation of protein targeting to mitochondrion; IEA:Ensembl.
GO; GO:1903125; P:negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation; IEA:Ensembl.
GO; GO:0007528; P:neuromuscular junction development; IEA:Ensembl.
GO; GO:0070997; P:neuron death; IEA:Ensembl.
GO; GO:0048812; P:neuron projection morphogenesis; IEA:Ensembl.
GO; GO:0018105; P:peptidyl-serine phosphorylation; IEA:Ensembl.
GO; GO:0010508; P:positive regulation of autophagy; IEA:Ensembl.
GO; GO:0090263; P:positive regulation of canonical Wnt signaling pathway; IEA:Ensembl.
GO; GO:0060161; P:positive regulation of dopamine receptor signaling pathway; IEA:Ensembl.
GO; GO:1901727; P:positive regulation of histone deacetylase activity; IEA:Ensembl.
GO; GO:0043068; P:positive regulation of programmed cell death; IEA:Ensembl.
GO; GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IEA:Ensembl.
GO; GO:1902499; P:positive regulation of protein autoubiquitination; IEA:Ensembl.
GO; GO:0032092; P:positive regulation of protein binding; IEA:Ensembl.
GO; GO:0033160; P:positive regulation of protein import into nucleus, translocation; IEA:Ensembl.
GO; GO:0046777; P:protein autophosphorylation; IEA:Ensembl.
GO; GO:0072593; P:reactive oxygen species metabolic process; IEA:Ensembl.
GO; GO:0002819; P:regulation of adaptive immune response; IBA:GO_Central.
GO; GO:2000172; P:regulation of branching morphogenesis of a nerve; IEA:Ensembl.
GO; GO:1905289; P:regulation of CAMKK-AMPK signaling cascade; IEA:Ensembl.
GO; GO:0061001; P:regulation of dendritic spine morphogenesis; IEA:Ensembl.
GO; GO:0035564; P:regulation of kidney size; IEA:Ensembl.
GO; GO:0040012; P:regulation of locomotion; IEA:Ensembl.
GO; GO:0035751; P:regulation of lysosomal lumen pH; IEA:Ensembl.
GO; GO:0051900; P:regulation of mitochondrial depolarization; IEA:Ensembl.
GO; GO:1902692; P:regulation of neuroblast proliferation; IEA:Ensembl.
GO; GO:0014041; P:regulation of neuron maturation; IEA:Ensembl.
GO; GO:0010738; P:regulation of protein kinase A signaling; IEA:Ensembl.
GO; GO:1905279; P:regulation of retrograde transport, endosome to Golgi; IEA:Ensembl.
GO; GO:0051966; P:regulation of synaptic transmission, glutamatergic; IEA:Ensembl.
GO; GO:2000300; P:regulation of synaptic vesicle exocytosis; IEA:Ensembl.
GO; GO:0043029; P:T cell homeostasis; IBA:GO_Central.
GO; GO:0022028; P:tangential migration from the subventricular zone to the olfactory bulb; IEA:Ensembl.
GO; GO:1904887; P:Wnt signalosome assembly; IEA:Ensembl.
Gene3D; 1.25.10.10; -; 2.
Gene3D; 1.25.40.20; -; 1.
Gene3D; 2.130.10.10; -; 1.
Gene3D; 3.80.10.10; -; 2.
InterPro; IPR036770; Ankyrin_rpt-contain_sf.
InterPro; IPR011989; ARM-like.
InterPro; IPR016024; ARM-type_fold.
InterPro; IPR032171; COR.
InterPro; IPR011009; Kinase-like_dom_sf.
InterPro; IPR001611; Leu-rich_rpt.
InterPro; IPR025875; Leu-rich_rpt_4.
InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
InterPro; IPR032675; LRR_dom_sf.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR000719; Prot_kinase_dom.
InterPro; IPR017441; Protein_kinase_ATP_BS.
InterPro; IPR020859; ROC_dom.
InterPro; IPR008271; Ser/Thr_kinase_AS.
InterPro; IPR005225; Small_GTP-bd_dom.
InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
InterPro; IPR036322; WD40_repeat_dom_sf.
Pfam; PF16095; COR; 1.
Pfam; PF12799; LRR_4; 1.
Pfam; PF13855; LRR_8; 1.
Pfam; PF00069; Pkinase; 1.
SMART; SM00369; LRR_TYP; 7.
SMART; SM00220; S_TKc; 1.
SUPFAM; SSF48371; SSF48371; 1.
SUPFAM; SSF50978; SSF50978; 1.
SUPFAM; SSF52540; SSF52540; 1.
SUPFAM; SSF56112; SSF56112; 1.
TIGRFAMs; TIGR00231; small_GTP; 1.
PROSITE; PS51450; LRR; 11.
PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
PROSITE; PS51424; ROC; 1.
4: Predicted;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000006718};
Leucine-rich repeat {ECO:0000256|SAAS:SAAS00537711};
Reference proteome {ECO:0000313|Proteomes:UP000006718};
Repeat {ECO:0000256|SAAS:SAAS00537628}.
DOMAIN 1328 1511 Roc. {ECO:0000259|PROSITE:PS51424}.
DOMAIN 1879 2146 Protein kinase.
{ECO:0000259|PROSITE:PS50011}.
COILED 319 346 {ECO:0000256|SAM:Coils}.
SEQUENCE 2527 AA; 285290 MW; 68DBEDDB6D2FD9DB CRC64;
MASGSCQGCE EDEETLKKLI VRLNNVQEGK QIETLVQILE DLLVFTYSEH ASKLFQGKNI
HVPLLIVLDS YMRVASVQQV GWSLLCKLIE ICPGTMQSLM GPQDVGNDWE VLGVHQLILK
MLTVHNASVN LSMIGLKTLD LLLTSGKITL LILDEESDIF MLIFDAMHSF PANDEIQKLG
CKALHVLFER VSEEQLTEFV ENKDYMILLS ALTNFKDEEE IVLHVLHCLH SLAIPCNNVE
VLMSGNVRCY NIVVEAMKAF PISEKIQEVS CCLLHRLTLG NFFNILVLNE VHEFVVEAVQ
RYPENAALQI SALSCLALLT ETIFLNQDLE EKNENQENDD EGEEVKLFWL EACYKALTWH
RKNKHVQEAA CWALNNLLMY QNSLHEKIGD EDGHFPAHRE VMLSMLMHSS SKEVFQASAN
ALSTLLEQNV NFRKILLSKG IYLNVLELMQ KHIHSPEVAE SGCKMLNHLF EGSNTSLDTM
AAVLPKIITV MKSHETSLPV QLEALRAILH FIVPGMPEES REDAESHRKL NMVKKQCFKN
DIHKLVLAAL NRFIGNPGIQ KCGLKVISFI AHFTDALGVL SLEGAVDSVL HTLQMYPDDQ
EIQCLGLSLI GCLITKKNLC IGTGHLLAKI LASSLYRFKD VAEVQTEGFQ TILAILKLSA
SFSKLLVHHS FDLVIFHQMS SSIMEQKDQQ FLNLCCKCFA KVAMDDDLKN MMLERACDQN
NSIMVECLLL LGADANQAKE GTSLICQVCE KESSPKLVEL LLNSGSREQD VRKALTISIG
KGDSQIISLL LRRLALDMAN NSICLGGFCI GKVEPSWLGP LFPDKTSNLR KQTNIASTLA
RMVIRYQMKS AMEEGAASGS DGNFSEDVLS KFDEWTFIPD SSMDSVFAQS DDLDSEGSEG
SFLVKKKSNS ISVGEFYRDA VLQRCSPNLQ RHSSSLGPIF DHEDLLRRKR KILSSDDSLR
SSKLQSHMRH SDSISSLASE REYITSLDLS ANELRDIDAL SQKSCISGHL EHLEKLELHQ
NALTSFPQQL CETLKSLTHL DLHSNKFTSF PSYLLKMSCV ANLDVSRNDI GPSVVLDPAV
KCPTLKQFNL SYNQLSSVPE NLADVIEKLE QLILEGNKIS GICSPLRLKE LKILNLSKNH
ISSLSENFLE ACPKVESFSA RMNFLAAMPF LPPSMTSLKL SQNKFTCIPE AILNLPHLRS
LDMSSNDIQY LPGPAHWKSL NLRELLFSHN QISILDLSEK AYLWSRVEKL HLSHNKLKEI
PPEIGCLENL TSLDVSYNLE LRSFPNEMGK LSKIWDLPLD ELRLNFDFKH IGCKAKDIIR
FLQQRLKKAV PYNRMKLMVV GNTGSGKTTL LQQLMKTKKS DLGMQSATVG IDVKDWPIQI
RGKRKRDLVL NVWDFAGREE FYSTHPHFMT QRALYLAVYD LSKGQAEVDA MKPWLFNIKA
RASSSPVILV GTHLDVSDER QRKACIGKIT KELLNKRGFP AIRDYHFVNA TEESDALAKL
RKTIINESLN FKIRDQPVVG QLIPDCYVEL EKIILSERKN VPIEFPVIDQ KRLLQLVREN
QLQLDENELP HAVHFLNESG VLLHFQDPAL QLSDLYFVEP KWLCKIMAQI LTVKVEGCPK
HPKGIISRRD VEKFLSKKRR FPKNYMSQYF KLLEKFQIAL PIGEEYLLVP SSLSDHRPVI
ELPHCENSEI IIRLYEMPYF PMGFWSRLIN RLLEISPYML SGRERALRPN RMYWRQGIYL
NWSPEAYCLV GSEVLDNHPE SFLKITVPSC RKGCILLGQV VDHIDSLMEE WFPGLLEIDI
CGEGETLLKK WALYSFNDGE EHQKILLDDL MKKAEEGDLL VNPDQPRLTI PISQIAPDLI
LADLPRNIML NNDELEFEQA PEFLLGDGSF GSVYRAAYEG EEVAVKIFNK HTSLRLLRQE
LVVLCHLHHP SLISLLAAGI RPRMLVMELA SKGSLDRLLQ QDKASLTRTL QHRIALHVAD
GLRYLHSAMI IYRDLKPHNV LLFTLYPNAA IIAKIADYGI AQYCCRMGIK TSEGTPGFRA
PEVARGNVIY NQQADVYSFG LLLYDILTTG GRIVEGLKFP NEFDELAIQG KLPDPVKEYG
CAPWPMVEKL ITKCLKENPQ ERPTSAQVFD ILNSAELVCL TRHILLPKNV IVDCMVATHH
NSRNASIWLG CGHTNRGQLS FLDLNTEGYT SEEVADSRIL CLALVHLPVQ KESWIVSGTQ
SGTLLVINTE DGKKRHTLEK MTDSITCLYC NSFSKQSKQK NFLLVGTADG NLAIFEDKTV
KLEGAAPLKI LNIGNVSTPL MCLSESTNST ERNVMWGGCG TKIFSFSNDF TIQKLIETRT
SQLFSYAAFS DSNIVTVVVD TVLYIAKKNS PVVEVWDKKT EKLCELIDCV HFLREVMVKV
NKESKHKMSY SGRVKALCLQ KNTALWIGTG GGHILLLDLS TRRVIRIIYN FCDSVRVMMT
AQLGSLKNVM LVLGYNRKST EGTQQQKEIQ SCLTVWDINL PHEVQNLEKH IEVRKELAEK
MRGTSIE


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