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Leucine rich repeat kinase 2

 F7G2I3_MONDO            Unreviewed;      2528 AA.
F7G2I3;
27-JUL-2011, integrated into UniProtKB/TrEMBL.
09-JAN-2013, sequence version 2.
25-APR-2018, entry version 62.
SubName: Full=Leucine rich repeat kinase 2 {ECO:0000313|Ensembl:ENSMODP00000023144};
Name=LRRK2 {ECO:0000313|Ensembl:ENSMODP00000023144};
Monodelphis domestica (Gray short-tailed opossum).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis.
NCBI_TaxID=13616 {ECO:0000313|Ensembl:ENSMODP00000023144, ECO:0000313|Proteomes:UP000002280};
[1] {ECO:0000313|Ensembl:ENSMODP00000023144, ECO:0000313|Proteomes:UP000002280}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=17495919; DOI=10.1038/nature05805;
Mikkelsen T.S., Wakefield M.J., Aken B., Amemiya C.T., Chang J.L.,
Duke S., Garber M., Gentles A.J., Goodstadt L., Heger A., Jurka J.,
Kamal M., Mauceli E., Searle S.M., Sharpe T., Baker M.L., Batzer M.A.,
Benos P.V., Belov K., Clamp M., Cook A., Cuff J., Das R., Davidow L.,
Deakin J.E., Fazzari M.J., Glass J.L., Grabherr M., Greally J.M.,
Gu W., Hore T.A., Huttley G.A., Kleber M., Jirtle R.L., Koina E.,
Lee J.T., Mahony S., Marra M.A., Miller R.D., Nicholls R.D., Oda M.,
Papenfuss A.T., Parra Z.E., Pollock D.D., Ray D.A., Schein J.E.,
Speed T.P., Thompson K., VandeBerg J.L., Wade C.M., Walker J.A.,
Waters P.D., Webber C., Weidman J.R., Xie X., Zody M.C., Baldwin J.,
Abdouelleil A., Abdulkadir J., Abebe A., Abera B., Abreu J.,
Acer S.C., Aftuck L., Alexander A., An P., Anderson E., Anderson S.,
Arachi H., Azer M., Bachantsang P., Barry A., Bayul T., Berlin A.,
Bessette D., Bloom T., Bloom T., Boguslavskiy L., Bonnet C.,
Boukhgalter B., Bourzgui I., Brown A., Cahill P., Channer S.,
Cheshatsang Y., Chuda L., Citroen M., Collymore A., Cooke P.,
Costello M., D'Aco K., Daza R., De Haan G., DeGray S., DeMaso C.,
Dhargay N., Dooley K., Dooley E., Doricent M., Dorje P., Dorjee K.,
Dupes A., Elong R., Falk J., Farina A., Faro S., Ferguson D.,
Fisher S., Foley C.D., Franke A., Friedrich D., Gadbois L., Gearin G.,
Gearin C.R., Giannoukos G., Goode T., Graham J., Grandbois E.,
Grewal S., Gyaltsen K., Hafez N., Hagos B., Hall J., Henson C.,
Hollinger A., Honan T., Huard M.D., Hughes L., Hurhula B., Husby M.E.,
Kamat A., Kanga B., Kashin S., Khazanovich D., Kisner P., Lance K.,
Lara M., Lee W., Lennon N., Letendre F., LeVine R., Lipovsky A.,
Liu X., Liu J., Liu S., Lokyitsang T., Lokyitsang Y., Lubonja R.,
Lui A., MacDonald P., Magnisalis V., Maru K., Matthews C.,
McCusker W., McDonough S., Mehta T., Meldrim J., Meneus L., Mihai O.,
Mihalev A., Mihova T., Mittelman R., Mlenga V., Montmayeur A.,
Mulrain L., Navidi A., Naylor J., Negash T., Nguyen T., Nguyen N.,
Nicol R., Norbu C., Norbu N., Novod N., O'Neill B., Osman S.,
Markiewicz E., Oyono O.L., Patti C., Phunkhang P., Pierre F.,
Priest M., Raghuraman S., Rege F., Reyes R., Rise C., Rogov P.,
Ross K., Ryan E., Settipalli S., Shea T., Sherpa N., Shi L., Shih D.,
Sparrow T., Spaulding J., Stalker J., Stange-Thomann N.,
Stavropoulos S., Stone C., Strader C., Tesfaye S., Thomson T.,
Thoulutsang Y., Thoulutsang D., Topham K., Topping I., Tsamla T.,
Vassiliev H., Vo A., Wangchuk T., Wangdi T., Weiand M., Wilkinson J.,
Wilson A., Yadav S., Young G., Yu Q., Zembek L., Zhong D., Zimmer A.,
Zwirko Z., Jaffe D.B., Alvarez P., Brockman W., Butler J., Chin C.,
Gnerre S., MacCallum I., Graves J.A., Ponting C.P., Breen M.,
Samollow P.B., Lander E.S., Lindblad-Toh K.;
"Genome of the marsupial Monodelphis domestica reveals innovation in
non-coding sequences.";
Nature 447:167-177(2007).
[2] {ECO:0000313|Ensembl:ENSMODP00000023144}
IDENTIFICATION.
Ensembl;
Submitted (JUL-2011) to UniProtKB.
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution-NoDerivs License
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RefSeq; XP_007503958.1; XM_007503896.2.
STRING; 13616.ENSMODP00000023144; -.
Ensembl; ENSMODT00000023557; ENSMODP00000023144; ENSMODG00000018556.
GeneID; 100019429; -.
KEGG; mdo:100019429; -.
CTD; 120892; -.
eggNOG; KOG0192; Eukaryota.
eggNOG; KOG0619; Eukaryota.
eggNOG; COG1100; LUCA.
eggNOG; COG4886; LUCA.
GeneTree; ENSGT00910000144054; -.
InParanoid; F7G2I3; -.
KO; K08844; -.
OMA; FKIRDQP; -.
OrthoDB; EOG091G003N; -.
TreeFam; TF313679; -.
Proteomes; UP000002280; Chromosome 8.
Bgee; ENSMODG00000018556; -.
GO; GO:0044753; C:amphisome; IEA:Ensembl.
GO; GO:0044754; C:autolysosome; IEA:Ensembl.
GO; GO:0099400; C:caveola neck; IEA:Ensembl.
GO; GO:0032473; C:cytoplasmic side of mitochondrial outer membrane; IEA:Ensembl.
GO; GO:0005829; C:cytosol; IBA:GO_Central.
GO; GO:0032839; C:dendrite cytoplasm; IEA:Ensembl.
GO; GO:0005783; C:endoplasmic reticulum; IBA:GO_Central.
GO; GO:0005768; C:endosome; IBA:GO_Central.
GO; GO:0005794; C:Golgi apparatus; IBA:GO_Central.
GO; GO:0005798; C:Golgi-associated vesicle; IEA:Ensembl.
GO; GO:0030426; C:growth cone; IEA:Ensembl.
GO; GO:0016234; C:inclusion body; IEA:Ensembl.
GO; GO:0005764; C:lysosome; IBA:GO_Central.
GO; GO:0045121; C:membrane raft; IBA:GO_Central.
GO; GO:0005902; C:microvillus; IEA:Ensembl.
GO; GO:0031966; C:mitochondrial membrane; IBA:GO_Central.
GO; GO:0097487; C:multivesicular body, internal vesicle; IEA:Ensembl.
GO; GO:0043005; C:neuron projection; IBA:GO_Central.
GO; GO:0005634; C:nucleus; IEA:Ensembl.
GO; GO:0043204; C:perikaryon; IEA:Ensembl.
GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
GO; GO:1990909; C:Wnt signalosome; IEA:Ensembl.
GO; GO:0003779; F:actin binding; IEA:Ensembl.
GO; GO:0005524; F:ATP binding; IEA:InterPro.
GO; GO:0030276; F:clathrin binding; IEA:Ensembl.
GO; GO:0005525; F:GTP binding; IEA:Ensembl.
GO; GO:0034211; F:GTP-dependent protein kinase activity; IEA:Ensembl.
GO; GO:0005096; F:GTPase activator activity; IEA:Ensembl.
GO; GO:0003924; F:GTPase activity; IEA:Ensembl.
GO; GO:0044325; F:ion channel binding; IEA:Ensembl.
GO; GO:0004708; F:MAP kinase kinase activity; IEA:Ensembl.
GO; GO:0036479; F:peroxidase inhibitor activity; IEA:Ensembl.
GO; GO:0042803; F:protein homodimerization activity; IEA:Ensembl.
GO; GO:0051018; F:protein kinase A binding; IEA:Ensembl.
GO; GO:0004674; F:protein serine/threonine kinase activity; IBA:GO_Central.
GO; GO:0017048; F:Rho GTPase binding; IBA:GO_Central.
GO; GO:0004871; F:signal transducer activity; IBA:GO_Central.
GO; GO:0017075; F:syntaxin-1 binding; IEA:Ensembl.
GO; GO:0015631; F:tubulin binding; IEA:Ensembl.
GO; GO:0000186; P:activation of MAPKK activity; IEA:Ensembl.
GO; GO:0019722; P:calcium-mediated signaling; IBA:GO_Central.
GO; GO:1903351; P:cellular response to dopamine; IEA:Ensembl.
GO; GO:0071287; P:cellular response to manganese ion; IEA:Ensembl.
GO; GO:0034599; P:cellular response to oxidative stress; IEA:Ensembl.
GO; GO:0009267; P:cellular response to starvation; IEA:Ensembl.
GO; GO:0008340; P:determination of adult lifespan; IEA:Ensembl.
GO; GO:0006897; P:endocytosis; IEA:Ensembl.
GO; GO:0035640; P:exploration behavior; IEA:Ensembl.
GO; GO:0007030; P:Golgi organization; IEA:Ensembl.
GO; GO:0046039; P:GTP metabolic process; IEA:Ensembl.
GO; GO:0048312; P:intracellular distribution of mitochondria; IEA:Ensembl.
GO; GO:0007005; P:mitochondrion organization; IBA:GO_Central.
GO; GO:1902902; P:negative regulation of autophagosome assembly; IBA:GO_Central.
GO; GO:1902236; P:negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway; IEA:Ensembl.
GO; GO:0034260; P:negative regulation of GTPase activity; IEA:Ensembl.
GO; GO:1903206; P:negative regulation of hydrogen peroxide-induced cell death; IEA:Ensembl.
GO; GO:1901215; P:negative regulation of neuron death; IEA:Ensembl.
GO; GO:0032091; P:negative regulation of protein binding; IEA:Ensembl.
GO; GO:0010955; P:negative regulation of protein processing; IEA:Ensembl.
GO; GO:1903215; P:negative regulation of protein targeting to mitochondrion; IEA:Ensembl.
GO; GO:1903125; P:negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation; IEA:Ensembl.
GO; GO:0007528; P:neuromuscular junction development; IEA:Ensembl.
GO; GO:0070997; P:neuron death; IEA:Ensembl.
GO; GO:0048812; P:neuron projection morphogenesis; IEA:Ensembl.
GO; GO:0018105; P:peptidyl-serine phosphorylation; IEA:Ensembl.
GO; GO:0010508; P:positive regulation of autophagy; IEA:Ensembl.
GO; GO:0090263; P:positive regulation of canonical Wnt signaling pathway; IEA:Ensembl.
GO; GO:0060161; P:positive regulation of dopamine receptor signaling pathway; IEA:Ensembl.
GO; GO:0043068; P:positive regulation of programmed cell death; IEA:Ensembl.
GO; GO:1902499; P:positive regulation of protein autoubiquitination; IEA:Ensembl.
GO; GO:0032092; P:positive regulation of protein binding; IEA:Ensembl.
GO; GO:0046777; P:protein autophosphorylation; IEA:Ensembl.
GO; GO:0072593; P:reactive oxygen species metabolic process; IEA:Ensembl.
GO; GO:2000172; P:regulation of branching morphogenesis of a nerve; IEA:Ensembl.
GO; GO:1905289; P:regulation of CAMKK-AMPK signaling cascade; IEA:Ensembl.
GO; GO:0061001; P:regulation of dendritic spine morphogenesis; IBA:GO_Central.
GO; GO:0040012; P:regulation of locomotion; IEA:Ensembl.
GO; GO:0035751; P:regulation of lysosomal lumen pH; IEA:Ensembl.
GO; GO:0051900; P:regulation of mitochondrial depolarization; IEA:Ensembl.
GO; GO:1902692; P:regulation of neuroblast proliferation; IEA:Ensembl.
GO; GO:0014041; P:regulation of neuron maturation; IEA:Ensembl.
GO; GO:1905279; P:regulation of retrograde transport, endosome to Golgi; IBA:GO_Central.
GO; GO:2000300; P:regulation of synaptic vesicle exocytosis; IEA:Ensembl.
GO; GO:1902803; P:regulation of synaptic vesicle transport; IBA:GO_Central.
GO; GO:0022028; P:tangential migration from the subventricular zone to the olfactory bulb; IEA:Ensembl.
GO; GO:1904887; P:Wnt signalosome assembly; IEA:Ensembl.
Gene3D; 1.25.10.10; -; 2.
Gene3D; 1.25.40.20; -; 1.
Gene3D; 2.130.10.10; -; 1.
Gene3D; 3.80.10.10; -; 2.
InterPro; IPR020683; Ankyrin_rpt-contain_dom.
InterPro; IPR036770; Ankyrin_rpt-contain_sf.
InterPro; IPR011989; ARM-like.
InterPro; IPR016024; ARM-type_fold.
InterPro; IPR032171; COR.
InterPro; IPR011009; Kinase-like_dom_sf.
InterPro; IPR001611; Leu-rich_rpt.
InterPro; IPR025875; Leu-rich_rpt_4.
InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
InterPro; IPR032675; LRR_dom_sf.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR000719; Prot_kinase_dom.
InterPro; IPR017441; Protein_kinase_ATP_BS.
InterPro; IPR020859; ROC_dom.
InterPro; IPR008271; Ser/Thr_kinase_AS.
InterPro; IPR005225; Small_GTP-bd_dom.
InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
InterPro; IPR036322; WD40_repeat_dom_sf.
Pfam; PF12796; Ank_2; 1.
Pfam; PF16095; COR; 1.
Pfam; PF12799; LRR_4; 1.
Pfam; PF13855; LRR_8; 1.
Pfam; PF00069; Pkinase; 1.
SMART; SM00369; LRR_TYP; 8.
SMART; SM00220; S_TKc; 1.
SUPFAM; SSF48371; SSF48371; 3.
SUPFAM; SSF50978; SSF50978; 1.
SUPFAM; SSF52540; SSF52540; 1.
SUPFAM; SSF56112; SSF56112; 1.
TIGRFAMs; TIGR00231; small_GTP; 1.
PROSITE; PS51450; LRR; 11.
PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
PROSITE; PS51424; ROC; 1.
4: Predicted;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000002280};
Leucine-rich repeat {ECO:0000256|SAAS:SAAS00537711};
Reference proteome {ECO:0000313|Proteomes:UP000002280};
Repeat {ECO:0000256|SAAS:SAAS00537628}.
DOMAIN 1329 1512 Roc. {ECO:0000259|PROSITE:PS51424}.
DOMAIN 1880 2139 Protein kinase.
{ECO:0000259|PROSITE:PS50011}.
COILED 321 341 {ECO:0000256|SAM:Coils}.
SEQUENCE 2528 AA; 287000 MW; FD93A0FF34E6746A CRC64;
MASGSSLEDE ENEEGILEKL TVRLQYVQEG KQIETVIQIL EDMMLLTFTD HAAKLFKGKN
VHIPLLLVLD SYMRVASVQQ AGWSLLCKLT EICPDIMQSL MGPQDVGKDW EVLGVHQLIL
KMFTVHNANI TLSVIGLKTL DQLLTSDLMT LRILEEDCSD VFTLIFDAMH TFTTNEEIQK
FGCKVLHVLF GKVSEEQLTE FIENKDYMFL LNALKRFNHE EEVVFHVLHS LHSLALPCSN
VEVLMSGNVR CYNIVVEAMK MFSNSEKIQE VGCCLLHRLT LDNFFNILVL NEVHEVIVKA
VKKYPMNAPL QIAALSCLAL LTETIILNRD LEEKNENQED DEDNKLCWLE ASYRALTLHR
KNTHVQEAAC WALNNLLIYQ SNLHENIGDE DDQYPAHREM VLSMLMHSSS KEVFQAAANA
LSTLSEQNVN IRKALLTKGI YWNVLQLMMR HLDFPEVAES GCRMLNHLLE GSNLNLDVMA
SVTSHIIEVM KNHKTSSAVQ LEAFRAILHI IVPESKKEHE EDSSLNINLK VIKNSCLLND
IHKLVLGALN KFIGNPGIQI CGLKIISSLV NCSGALEMFS QQGALDSVLH TLQMYPDDRG
IQCLGLSLLG SLITKKNLCT ETQDLLANIL VSSLQRFKDV VEVQISGFQT TLAILELSLC
FARLLLNYHS YDSLIFYQLS RCFTEQMDHQ FQNLCCKFFA KITSDDDIKN VLLVRACEEN
NSFMAECLLL LGADINKVNG KTSLICQVCE KESNPKLVEL LLNNGSREQE IRKALMISIK
KNNSQVISLL LRKLGLDLAN NSICLGGFCI GKIEPSWLSP LFPDKASNLR KKTNAGSALA
RMILRYQMKS LSEDGTMPSN DGSFPEDHLD KYGDWTFIPE SSIDYVFAHS DDLDSEGSEG
SFLMKKKSSS FNVGDLYKDN ALQLGSATLE RHSTSMETSF DHEELLKKRR DLFSSDDSVQ
GSSKFHSHLR QSDSVFSLTS ERECIKSLDL SANELEDIDD ISKKCCLSDH LTRLEKLELH
QNSLKRIPQQ LCETLKCLKY LDLHSNKITS IPAYFLKMNC ITNLDISRND IGPSIILDPT
IRCRTLKLLN LSYNQLSSVP EFLADVIENL EQLLLEGNKI SEIHSPLHLK ELKTLNLSKN
HLFSITDDFF ETCGKLEVFS ARMNLLVTMP RLPSSITILN ISQNKFTCVP EVILSLPHLR
SLDLSSNEIH SLPGPAHWQS LNLRELLFNH NQISILDLSE KAYAWSRMEK LHLSHNKLKE
IPPEIGFLEN LTSLDVSYNL ELRSFPNEMG KLTKIWDLPL DELHLNFDFK QIGCKTKDII
RFLQQRLKKA VPYNRMKLMV VGNTGSGKTT LLRQLMKSKK RELSLPSTTV GIDVKDWFIQ
LWSKGKKELI LNVWDFAGRE EFYSTHPHFM TQRALYLAVY DLSKGYAEVD AMKPWLFNIK
ARASSSPVIL VGTHMDVSDE KQRKTSIIKI TKELLNKRGF PEIRDYHFVN ATEECEALVK
LRKSIIKESL NFKIRDQPVV GQLIPDCYLE LEKKILLERK NVPTEFPVIN QKQLVQLVKE
SQLQLDENEL PHAVHFLNES GVLLHFQDPA LQLSDLYFVE PKWLCKMMAQ ILTVKVEGFA
KYPKGIIQRS DVEKFLSKKS RFPKNYMSQY FKLLEKFQIA LPIGEEHLLV PSSLSDHRPV
IELPHCENSE VIVRLYEMPY FPMGFWSRLI SRLLEISPYM LSGRERALRP NRMYWRQGIY
LNWSPEAYCL VESSILDNSS ESFLKITAPS CRKGCIILGQ VVDHIDSLME EWFPGLLEID
VCGEGETLLK KWALYSFNDG EEQQKILLDD LMKKTEEGDL LINPDQPRLT IPIGHIAPDL
ILADLPRNIM LNNDDLEFEQ APEFLLGDGG FGSVYRASYK GEEVAVKIFN KHTSLRLLRQ
ELVVLCHLHH PSLISLLAAG IRPRMLVMEL ASKGSLDRLL QQDKASLTRT LQHRIALHVA
DGLRYLHASM IIYRDLKPHN VLLFTLYPNS AVIAKIADYG IAQYCCRMGI KTSEGTAGFR
APEVARGNVI YNQQADVYSF GLLLYDILTT GSRILEGLKF PNEFDELAIL GKLPDPVKEY
GCTPWPKVEN LIKKCLKENP QERPTSAQVY DILNSAELIC LMRYILIPKI FIAECMVATT
QSSKNAIIWL GSGNNDAGQL SCLEINSERH TSENVTESRI LCLALVCLLV EKESWIVAGT
QSGTLLAVKT EDDKKSHVLQ RMTDSVTCLY CNSFSKQSKQ KNFLLVGTAN GRLAIFEDRS
IKYEGAAPLK TLNIGNVSTP LMCLNESIYS SEKNIIWGGC GTKIFSLSSD FSIQKFIETK
ANQLFSYATF SDSNIISIVV DKAIYVAKKN SHFVEVWDKK TEKLCVLIDC VQFLKERMVL
VNKESKYKMI YSGRVKTLCL QKNTALWIGT GGGHILLVDL STHRIIHIIQ NFCDSIRAMM
TVQLGSLKNV ILVLGYCQKN SESTQHQKEM ESCLSVWDIN LPHEVENLAK HTEVRKELAE
KMRSISME


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