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Leucine rich repeat kinase 2

 G1N5N3_MELGA            Unreviewed;      2450 AA.
G1N5N3;
19-OCT-2011, integrated into UniProtKB/TrEMBL.
19-OCT-2011, sequence version 1.
20-JUN-2018, entry version 61.
SubName: Full=Leucine rich repeat kinase 2 {ECO:0000313|Ensembl:ENSMGAP00000007280};
Name=LRRK2 {ECO:0000313|Ensembl:ENSMGAP00000007280};
Meleagris gallopavo (Wild turkey).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes;
Phasianidae; Meleagridinae; Meleagris.
NCBI_TaxID=9103 {ECO:0000313|Ensembl:ENSMGAP00000007280, ECO:0000313|Proteomes:UP000001645};
[1] {ECO:0000313|Ensembl:ENSMGAP00000007280, ECO:0000313|Proteomes:UP000001645}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=20838655; DOI=10.1371/journal.pbio.1000475;
Dalloul R.A., Long J.A., Zimin A.V., Aslam L., Beal K., Blomberg L.A.,
Bouffard P., Burt D.W., Crasta O., Crooijmans R.P., Cooper K.,
Coulombe R.A., De S., Delany M.E., Dodgson J.B., Dong J.J., Evans C.,
Frederickson K.M., Flicek P., Florea L., Folkerts O., Groenen M.A.,
Harkins T.T., Herrero J., Hoffmann S., Megens H.J., Jiang A.,
de Jong P., Kaiser P., Kim H., Kim K.W., Kim S., Langenberger D.,
Lee M.K., Lee T., Mane S., Marcais G., Marz M., McElroy A.P.,
Modise T., Nefedov M., Notredame C., Paton I.R., Payne W.S.,
Pertea G., Prickett D., Puiu D., Qioa D., Raineri E., Ruffier M.,
Salzberg S.L., Schatz M.C., Scheuring C., Schmidt C.J., Schroeder S.,
Searle S.M., Smith E.J., Smith J., Sonstegard T.S., Stadler P.F.,
Tafer H., Tu Z.J., Van Tassell C.P., Vilella A.J., Williams K.P.,
Yorke J.A., Zhang L., Zhang H.B., Zhang X., Zhang Y., Reed K.M.;
"Multi-platform next-generation sequencing of the domestic turkey
(Meleagris gallopavo): genome assembly and analysis.";
PLoS Biol. 8:E1000475-E1000475(2010).
[2] {ECO:0000313|Ensembl:ENSMGAP00000007280}
IDENTIFICATION.
Ensembl;
Submitted (SEP-2011) to UniProtKB.
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STRING; 9103.ENSMGAP00000007280; -.
Ensembl; ENSMGAT00000008051; ENSMGAP00000007280; ENSMGAG00000007137.
eggNOG; KOG0192; Eukaryota.
eggNOG; KOG0619; Eukaryota.
eggNOG; COG1100; LUCA.
eggNOG; COG4886; LUCA.
GeneTree; ENSGT00910000144054; -.
InParanoid; G1N5N3; -.
OMA; FKIRDQP; -.
OrthoDB; EOG091G003N; -.
TreeFam; TF313679; -.
Proteomes; UP000001645; Chromosome 1.
GO; GO:0044753; C:amphisome; IEA:Ensembl.
GO; GO:0044754; C:autolysosome; IEA:Ensembl.
GO; GO:0099400; C:caveola neck; IEA:Ensembl.
GO; GO:0032473; C:cytoplasmic side of mitochondrial outer membrane; IEA:Ensembl.
GO; GO:0005829; C:cytosol; IEA:Ensembl.
GO; GO:0032839; C:dendrite cytoplasm; IEA:Ensembl.
GO; GO:0005783; C:endoplasmic reticulum; IEA:Ensembl.
GO; GO:0005798; C:Golgi-associated vesicle; IEA:Ensembl.
GO; GO:0030426; C:growth cone; IEA:Ensembl.
GO; GO:0016234; C:inclusion body; IEA:Ensembl.
GO; GO:0005902; C:microvillus; IEA:Ensembl.
GO; GO:0005743; C:mitochondrial inner membrane; IEA:Ensembl.
GO; GO:0005759; C:mitochondrial matrix; IEA:Ensembl.
GO; GO:0097487; C:multivesicular body, internal vesicle; IEA:Ensembl.
GO; GO:0005634; C:nucleus; IEA:Ensembl.
GO; GO:0043204; C:perikaryon; IEA:Ensembl.
GO; GO:0098794; C:postsynapse; IEA:GOC.
GO; GO:1990904; C:ribonucleoprotein complex; IEA:Ensembl.
GO; GO:0008021; C:synaptic vesicle; IEA:Ensembl.
GO; GO:0005802; C:trans-Golgi network; IEA:Ensembl.
GO; GO:1990909; C:Wnt signalosome; IEA:Ensembl.
GO; GO:0003779; F:actin binding; IEA:Ensembl.
GO; GO:0005524; F:ATP binding; IEA:InterPro.
GO; GO:1904713; F:beta-catenin destruction complex binding; IEA:Ensembl.
GO; GO:0030276; F:clathrin binding; IEA:Ensembl.
GO; GO:0005525; F:GTP binding; IEA:Ensembl.
GO; GO:0034211; F:GTP-dependent protein kinase activity; IEA:Ensembl.
GO; GO:0005096; F:GTPase activator activity; IEA:Ensembl.
GO; GO:0003924; F:GTPase activity; IEA:Ensembl.
GO; GO:0044325; F:ion channel binding; IEA:Ensembl.
GO; GO:0004708; F:MAP kinase kinase activity; IEA:Ensembl.
GO; GO:0036479; F:peroxidase inhibitor activity; IEA:Ensembl.
GO; GO:0042803; F:protein homodimerization activity; IEA:Ensembl.
GO; GO:0051018; F:protein kinase A binding; IEA:Ensembl.
GO; GO:0017048; F:Rho GTPase binding; IEA:Ensembl.
GO; GO:0017075; F:syntaxin-1 binding; IEA:Ensembl.
GO; GO:0015631; F:tubulin binding; IEA:Ensembl.
GO; GO:0000186; P:activation of MAPKK activity; IEA:Ensembl.
GO; GO:0019722; P:calcium-mediated signaling; IEA:Ensembl.
GO; GO:0034613; P:cellular protein localization; IEA:Ensembl.
GO; GO:1903351; P:cellular response to dopamine; IEA:Ensembl.
GO; GO:0071287; P:cellular response to manganese ion; IEA:Ensembl.
GO; GO:0034599; P:cellular response to oxidative stress; IEA:Ensembl.
GO; GO:0009267; P:cellular response to starvation; IEA:Ensembl.
GO; GO:0008340; P:determination of adult lifespan; IEA:Ensembl.
GO; GO:0006897; P:endocytosis; IEA:Ensembl.
GO; GO:0060079; P:excitatory postsynaptic potential; IEA:Ensembl.
GO; GO:0007030; P:Golgi organization; IEA:Ensembl.
GO; GO:0046039; P:GTP metabolic process; IEA:Ensembl.
GO; GO:0048312; P:intracellular distribution of mitochondria; IEA:Ensembl.
GO; GO:0035641; P:locomotory exploration behavior; IEA:Ensembl.
GO; GO:1902902; P:negative regulation of autophagosome assembly; IEA:Ensembl.
GO; GO:1902236; P:negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway; IEA:Ensembl.
GO; GO:0090394; P:negative regulation of excitatory postsynaptic potential; IEA:Ensembl.
GO; GO:0034260; P:negative regulation of GTPase activity; IEA:Ensembl.
GO; GO:1903206; P:negative regulation of hydrogen peroxide-induced cell death; IEA:Ensembl.
GO; GO:1901215; P:negative regulation of neuron death; IEA:Ensembl.
GO; GO:0032091; P:negative regulation of protein binding; IEA:Ensembl.
GO; GO:0001933; P:negative regulation of protein phosphorylation; IEA:Ensembl.
GO; GO:0010955; P:negative regulation of protein processing; IEA:Ensembl.
GO; GO:1903215; P:negative regulation of protein targeting to mitochondrion; IEA:Ensembl.
GO; GO:1903125; P:negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation; IEA:Ensembl.
GO; GO:0007528; P:neuromuscular junction development; IEA:Ensembl.
GO; GO:0070997; P:neuron death; IEA:Ensembl.
GO; GO:0048812; P:neuron projection morphogenesis; IEA:Ensembl.
GO; GO:0018105; P:peptidyl-serine phosphorylation; IEA:Ensembl.
GO; GO:0010508; P:positive regulation of autophagy; IEA:Ensembl.
GO; GO:0090263; P:positive regulation of canonical Wnt signaling pathway; IEA:Ensembl.
GO; GO:0060161; P:positive regulation of dopamine receptor signaling pathway; IEA:Ensembl.
GO; GO:1901727; P:positive regulation of histone deacetylase activity; IEA:Ensembl.
GO; GO:0043068; P:positive regulation of programmed cell death; IEA:Ensembl.
GO; GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IEA:Ensembl.
GO; GO:1902499; P:positive regulation of protein autoubiquitination; IEA:Ensembl.
GO; GO:0032092; P:positive regulation of protein binding; IEA:Ensembl.
GO; GO:0033160; P:positive regulation of protein import into nucleus, translocation; IEA:Ensembl.
GO; GO:0046777; P:protein autophosphorylation; IEA:Ensembl.
GO; GO:0072593; P:reactive oxygen species metabolic process; IEA:Ensembl.
GO; GO:2000172; P:regulation of branching morphogenesis of a nerve; IEA:Ensembl.
GO; GO:1905289; P:regulation of CAMKK-AMPK signaling cascade; IEA:Ensembl.
GO; GO:0061001; P:regulation of dendritic spine morphogenesis; IEA:Ensembl.
GO; GO:0035564; P:regulation of kidney size; IEA:Ensembl.
GO; GO:0040012; P:regulation of locomotion; IEA:Ensembl.
GO; GO:0035751; P:regulation of lysosomal lumen pH; IEA:Ensembl.
GO; GO:0051900; P:regulation of mitochondrial depolarization; IEA:Ensembl.
GO; GO:1902692; P:regulation of neuroblast proliferation; IEA:Ensembl.
GO; GO:0014041; P:regulation of neuron maturation; IEA:Ensembl.
GO; GO:0010738; P:regulation of protein kinase A signaling; IEA:Ensembl.
GO; GO:1905279; P:regulation of retrograde transport, endosome to Golgi; IEA:Ensembl.
GO; GO:0051966; P:regulation of synaptic transmission, glutamatergic; IEA:Ensembl.
GO; GO:2000300; P:regulation of synaptic vesicle exocytosis; IEA:Ensembl.
GO; GO:0022028; P:tangential migration from the subventricular zone to the olfactory bulb; IEA:Ensembl.
GO; GO:1904887; P:Wnt signalosome assembly; IEA:Ensembl.
Gene3D; 1.25.10.10; -; 1.
Gene3D; 1.25.40.20; -; 1.
Gene3D; 2.130.10.10; -; 1.
Gene3D; 3.80.10.10; -; 3.
InterPro; IPR036770; Ankyrin_rpt-contain_sf.
InterPro; IPR011989; ARM-like.
InterPro; IPR016024; ARM-type_fold.
InterPro; IPR032171; COR.
InterPro; IPR011009; Kinase-like_dom_sf.
InterPro; IPR001611; Leu-rich_rpt.
InterPro; IPR025875; Leu-rich_rpt_4.
InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
InterPro; IPR032675; LRR_dom_sf.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR000719; Prot_kinase_dom.
InterPro; IPR017441; Protein_kinase_ATP_BS.
InterPro; IPR020859; ROC_dom.
InterPro; IPR008271; Ser/Thr_kinase_AS.
InterPro; IPR005225; Small_GTP-bd_dom.
InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
InterPro; IPR036322; WD40_repeat_dom_sf.
Pfam; PF16095; COR; 1.
Pfam; PF12799; LRR_4; 1.
Pfam; PF13855; LRR_8; 1.
Pfam; PF00069; Pkinase; 1.
SMART; SM00369; LRR_TYP; 7.
SMART; SM00220; S_TKc; 1.
SUPFAM; SSF48371; SSF48371; 2.
SUPFAM; SSF50978; SSF50978; 2.
SUPFAM; SSF52540; SSF52540; 1.
SUPFAM; SSF56112; SSF56112; 1.
TIGRFAMs; TIGR00231; small_GTP; 1.
PROSITE; PS51450; LRR; 11.
PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
PROSITE; PS51424; ROC; 1.
4: Predicted;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000001645};
Leucine-rich repeat {ECO:0000256|SAAS:SAAS00537711};
Reference proteome {ECO:0000313|Proteomes:UP000001645};
Repeat {ECO:0000256|SAAS:SAAS00537628}.
DOMAIN 1248 1431 Roc. {ECO:0000259|PROSITE:PS51424}.
DOMAIN 1799 2058 Protein kinase.
{ECO:0000259|PROSITE:PS50011}.
COILED 242 269 {ECO:0000256|SAM:Coils}.
COILED 2303 2323 {ECO:0000256|SAM:Coils}.
SEQUENCE 2450 AA; 276872 MW; BCA2CDEA14E65479 CRC64;
ILQMGWSLLC KLIEICPSTL QNIALKDVGK DWEVLGVHQQ ILKMLTVHKG NVILSVIGLK
TLNLLLMSDV IAFLLLEEEV DVFSLVFNAM HTFPKNEEIQ QHGCRALCKL FEKVPEEQLT
EFVESKDHMI ILEVFKEFPE KEEVILPALY SLHSLAGPCN NVEVLMSGNV RCYNVIVEMM
KSFPNSETVQ EVCCCLLHKL TLGNFFNILV LHKVPEVIVK AVKTYSENAK LQAAALSCLA
LLTETIFLNR DLEERKEEEE EEKLCWLEAC YRALELHRKN TDVLEAACWA LKNLFLYQRS
LHEKIGDGDN QFPIDRAVML SMLMHSSSKE VFQAAASTLA ILSQQNVNIR KTLLAKGIHM
NVLEIMKKHP HSPEVAESAC RILNHVFEGS FPHLDIMTVA ASEVVKAMRK HEKSLSVQLE
ALRVLLHFMM PGKLSKNFFP NVKCVCTVKV IKSQCLLEGT HSLVLGALNR FIGNPSIQRC
GLKLLTSVAE CTGALEILTQ QGATDTVLHT LQMYPDEQDI QSLGLSLLLF LITRKSLCIA
TMHVLATVLV STLRRFKEVT EIQMHGFHAI LSILGFSPCF AKLLINESFD TVIFYQMSMC
FTNQRDRQFQ SLCCKCFAKI AENDDLKNMM LEKACVEYNC IMAECLLLLG ADINKKTKTS
SLIYQVCEKG NNPKLVELLL ANGAREQDVR SALTISIKRG DSQIISLLLK KLSLDVANSS
ICLGGFGIGR LEPSWLIPLF PDKLTPPRKQ NTDAGSALAR MVLKYQMKNI SEDRSRTCSD
LNFSEDGVDK NYDWDFISDP LVDTVFPSSD DIDSEGSEGS LFRKKKSNSI AVADLHCREL
AFQRGSPTLP RHSYSVGPGS DYEPLVKQRR KLLLSDEPSR ISKSSLHLRP SDSLSSLISE
KECIKSLDLS SNELENIDAI SQNSSLMSHL EHLDKLELHQ NALTNIPEQL CENLKCLTYL
DLHSNRFTSF PTYLLKMNCI AYLDISRNDI GPSFALDPHL RCPTLKQLNL SYNQLMGIPE
FLANVAENLE QLLLEGNKIS CLSSPMSLKE LKILNISKNN ISSLAENVLM GCAKLELFNA
RMNALEIIPD LSSSITTLKL SQNCFINVPE TILLLPHLRS VDLSQNKIIS LPGPVHWKSL
NLRELLFNHN QIGVLDLSEK ACAWSRLEKL HLSNNKLKEI PPQIGFLENL TSLDVSHNPD
LRFFPDEMGR LSKIWDLPLE GLHLNLDFKH VGCKARDIIR FLQQRLKKAV PYNRMKLMIV
GNTGSGKTTL LQQLMKCKRT ELGCPKATVG IDVKDWIIQG KGKMKKELIL NVWDFGGQEE
FYSTHPHFMT QRALYLAVYD LSKGQAEVDA MKPWLFNIKA RASTSPVILV GTHLDVSDEK
QHKDCMSKIT RELLNKRGFP AIQDYHFVNA KEESDSIMRL RKIIIKESLH FKIRDQPVVG
QLIPDSYLEL EKRILLERKN VPVEFPVIDQ KRLLEMVQEN KLQLDENELP HAIHFLNESG
VLLHFQDPAL QLRDLYFVDP KWLCKIMAQI LTVKVEGFSK YPKGIVKRSD VEKFLLKKSK
FPKIYMSQYF KLLEKFQIAL PLGEDQLLIP SSLSDHRPVI ELPHCENSEI IIRLYEMPYF
PMGFWSRLIN RLLEISPYML SGRARALRPN RMYWRQGIYL NWSPEAYCLV ESAVFDNNPD
SFLKITAPSC RKGCILLGQV VDHIDSLMEE WFPGLLDIDV CGEGETLLKK WALYSFEDGE
EHQKILLDDL LKKAEEGDLL VNPEQPRHTI PIAQIAPDLI LADLPRNIML NTDELEFDKA
PEFLLGDGGF GSVYRASYAG EEVAVKIFNK HTSLRLLRQE LAVLCHLHHP SLVSLLAAAV
RPRMLVMELA LKGSLDRLLQ QDKANLTRTL QHRIALHVAD GLRYLHSAMI IYRDLKPHNV
LLFTLYPNAA VIAKIADYGI AQYCCRMGIK TSEGTPGFRA PEVARGNVIY NQQADVYSFG
LLLYDILTGG GRIMEGVKFP NEFDELAIQG KLPDPVKEYG CAPWPKVEHL IKKCLKENPQ
ERPTSSQVYE ILNSAELICL MRYVSIPSTS TAECMVATNQ SCKKAGVWIG NGNTEKAQLS
FVNLNTDGHT CEDIADSKIL SLALVTLPTE KENWIVAGTH SGSLWAVNTE DETRRHRLQK
MSDSITCLYC NSLSKQSKQK NFFLVGTADG MLAVFEDRAV KCKGATPLKI LTIGNVSTPL
MCLNESTYLS EKNTIWGGCG TKLIALSSDF SVQKLIETKS SQLFCHNAYS DANIISIAVD
KSIYLAKKNS HFVEIWDKKT EKLSELIDCA HFLKDEVEKL NQESKHKVAY SGRVKTICLQ
KNTALWVGTG GGHILLLDLS TRRPVRVIDN FCDSIRVMLT AQLEKGSLKN VVLVLGYCYK
GDTEDDKYRK ELQSCVSVWD INLPHEVQNL KKHIEVRQEL AEKMKSFTLD


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