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Leucine rich repeat kinase 2

 G1PDK4_MYOLU            Unreviewed;      2530 AA.
G1PDK4;
19-OCT-2011, integrated into UniProtKB/TrEMBL.
19-OCT-2011, sequence version 1.
23-MAY-2018, entry version 57.
SubName: Full=Leucine rich repeat kinase 2 {ECO:0000313|Ensembl:ENSMLUP00000008555};
Name=LRRK2 {ECO:0000313|Ensembl:ENSMLUP00000008555};
Myotis lucifugus (Little brown bat).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera;
Vespertilionidae; Myotis.
NCBI_TaxID=59463 {ECO:0000313|Ensembl:ENSMLUP00000008555, ECO:0000313|Proteomes:UP000001074};
[1] {ECO:0000313|Ensembl:ENSMLUP00000008555, ECO:0000313|Proteomes:UP000001074}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=21993624; DOI=10.1038/nature10530;
Lindblad-Toh K., Garber M., Zuk O., Lin M.F., Parker B.J.,
Washietl S., Kheradpour P., Ernst J., Jordan G., Mauceli E.,
Ward L.D., Lowe C.B., Holloway A.K., Clamp M., Gnerre S., Alfoldi J.,
Beal K., Chang J., Clawson H., Cuff J., Di Palma F., Fitzgerald S.,
Flicek P., Guttman M., Hubisz M.J., Jaffe D.B., Jungreis I.,
Kent W.J., Kostka D., Lara M., Martins A.L., Massingham T., Moltke I.,
Raney B.J., Rasmussen M.D., Robinson J., Stark A., Vilella A.J.,
Wen J., Xie X., Zody M.C., Baldwin J., Bloom T., Chin C.W., Heiman D.,
Nicol R., Nusbaum C., Young S., Wilkinson J., Worley K.C., Kovar C.L.,
Muzny D.M., Gibbs R.A., Cree A., Dihn H.H., Fowler G., Jhangiani S.,
Joshi V., Lee S., Lewis L.R., Nazareth L.V., Okwuonu G.,
Santibanez J., Warren W.C., Mardis E.R., Weinstock G.M., Wilson R.K.,
Delehaunty K., Dooling D., Fronik C., Fulton L., Fulton B., Graves T.,
Minx P., Sodergren E., Birney E., Margulies E.H., Herrero J.,
Green E.D., Haussler D., Siepel A., Goldman N., Pollard K.S.,
Pedersen J.S., Lander E.S., Kellis M.;
"A high-resolution map of human evolutionary constraint using 29
mammals.";
Nature 478:476-482(2011).
[2] {ECO:0000313|Ensembl:ENSMLUP00000008555}
IDENTIFICATION.
Ensembl;
Submitted (SEP-2011) to UniProtKB.
-----------------------------------------------------------------------
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EMBL; AAPE02013428; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AAPE02013429; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AAPE02013430; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AAPE02013431; -; NOT_ANNOTATED_CDS; Genomic_DNA.
STRING; 59463.ENSMLUP00000008555; -.
Ensembl; ENSMLUT00000009387; ENSMLUP00000008555; ENSMLUG00000009336.
eggNOG; KOG0192; Eukaryota.
eggNOG; KOG0619; Eukaryota.
eggNOG; COG1100; LUCA.
eggNOG; COG4886; LUCA.
GeneTree; ENSGT00910000144054; -.
InParanoid; G1PDK4; -.
OMA; FKIRDQP; -.
OrthoDB; EOG091G003N; -.
TreeFam; TF313679; -.
Proteomes; UP000001074; Unassembled WGS sequence.
GO; GO:0044753; C:amphisome; IEA:Ensembl.
GO; GO:0044754; C:autolysosome; IEA:Ensembl.
GO; GO:0099400; C:caveola neck; IEA:Ensembl.
GO; GO:0032473; C:cytoplasmic side of mitochondrial outer membrane; IEA:Ensembl.
GO; GO:0005829; C:cytosol; IEA:Ensembl.
GO; GO:0032839; C:dendrite cytoplasm; IEA:Ensembl.
GO; GO:0005783; C:endoplasmic reticulum; IEA:Ensembl.
GO; GO:0005798; C:Golgi-associated vesicle; IEA:Ensembl.
GO; GO:0030426; C:growth cone; IEA:Ensembl.
GO; GO:0016234; C:inclusion body; IEA:Ensembl.
GO; GO:0005902; C:microvillus; IEA:Ensembl.
GO; GO:0005743; C:mitochondrial inner membrane; IEA:Ensembl.
GO; GO:0005759; C:mitochondrial matrix; IEA:Ensembl.
GO; GO:0097487; C:multivesicular body, internal vesicle; IEA:Ensembl.
GO; GO:0005634; C:nucleus; IEA:Ensembl.
GO; GO:0043204; C:perikaryon; IEA:Ensembl.
GO; GO:0098794; C:postsynapse; IEA:GOC.
GO; GO:0008021; C:synaptic vesicle; IEA:Ensembl.
GO; GO:0005802; C:trans-Golgi network; IEA:Ensembl.
GO; GO:1990909; C:Wnt signalosome; IEA:Ensembl.
GO; GO:0003779; F:actin binding; IEA:Ensembl.
GO; GO:0005524; F:ATP binding; IEA:InterPro.
GO; GO:1904713; F:beta-catenin destruction complex binding; IEA:Ensembl.
GO; GO:0030276; F:clathrin binding; IEA:Ensembl.
GO; GO:0005525; F:GTP binding; IEA:Ensembl.
GO; GO:0034211; F:GTP-dependent protein kinase activity; IEA:Ensembl.
GO; GO:0005096; F:GTPase activator activity; IEA:Ensembl.
GO; GO:0003924; F:GTPase activity; IEA:Ensembl.
GO; GO:0044325; F:ion channel binding; IEA:Ensembl.
GO; GO:0004708; F:MAP kinase kinase activity; IEA:Ensembl.
GO; GO:0036479; F:peroxidase inhibitor activity; IEA:Ensembl.
GO; GO:0042803; F:protein homodimerization activity; IEA:Ensembl.
GO; GO:0051018; F:protein kinase A binding; IEA:Ensembl.
GO; GO:0017048; F:Rho GTPase binding; IEA:Ensembl.
GO; GO:0017075; F:syntaxin-1 binding; IEA:Ensembl.
GO; GO:0015631; F:tubulin binding; IEA:Ensembl.
GO; GO:0000186; P:activation of MAPKK activity; IEA:Ensembl.
GO; GO:0019722; P:calcium-mediated signaling; IEA:Ensembl.
GO; GO:0034613; P:cellular protein localization; IEA:Ensembl.
GO; GO:1903351; P:cellular response to dopamine; IEA:Ensembl.
GO; GO:0071287; P:cellular response to manganese ion; IEA:Ensembl.
GO; GO:0034599; P:cellular response to oxidative stress; IEA:Ensembl.
GO; GO:0009267; P:cellular response to starvation; IEA:Ensembl.
GO; GO:0008340; P:determination of adult lifespan; IEA:Ensembl.
GO; GO:0006897; P:endocytosis; IEA:Ensembl.
GO; GO:0060079; P:excitatory postsynaptic potential; IEA:Ensembl.
GO; GO:0007030; P:Golgi organization; IEA:Ensembl.
GO; GO:0046039; P:GTP metabolic process; IEA:Ensembl.
GO; GO:0048312; P:intracellular distribution of mitochondria; IEA:Ensembl.
GO; GO:0035641; P:locomotory exploration behavior; IEA:Ensembl.
GO; GO:1902902; P:negative regulation of autophagosome assembly; IEA:Ensembl.
GO; GO:1902236; P:negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway; IEA:Ensembl.
GO; GO:0090394; P:negative regulation of excitatory postsynaptic potential; IEA:Ensembl.
GO; GO:0034260; P:negative regulation of GTPase activity; IEA:Ensembl.
GO; GO:1903206; P:negative regulation of hydrogen peroxide-induced cell death; IEA:Ensembl.
GO; GO:1901215; P:negative regulation of neuron death; IEA:Ensembl.
GO; GO:0032091; P:negative regulation of protein binding; IEA:Ensembl.
GO; GO:0001933; P:negative regulation of protein phosphorylation; IEA:Ensembl.
GO; GO:0010955; P:negative regulation of protein processing; IEA:Ensembl.
GO; GO:1903215; P:negative regulation of protein targeting to mitochondrion; IEA:Ensembl.
GO; GO:1903125; P:negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation; IEA:Ensembl.
GO; GO:0007528; P:neuromuscular junction development; IEA:Ensembl.
GO; GO:0070997; P:neuron death; IEA:Ensembl.
GO; GO:0048812; P:neuron projection morphogenesis; IEA:Ensembl.
GO; GO:0018105; P:peptidyl-serine phosphorylation; IEA:Ensembl.
GO; GO:0010508; P:positive regulation of autophagy; IEA:Ensembl.
GO; GO:0090263; P:positive regulation of canonical Wnt signaling pathway; IEA:Ensembl.
GO; GO:0060161; P:positive regulation of dopamine receptor signaling pathway; IEA:Ensembl.
GO; GO:1901727; P:positive regulation of histone deacetylase activity; IEA:Ensembl.
GO; GO:0043068; P:positive regulation of programmed cell death; IEA:Ensembl.
GO; GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IEA:Ensembl.
GO; GO:1902499; P:positive regulation of protein autoubiquitination; IEA:Ensembl.
GO; GO:0032092; P:positive regulation of protein binding; IEA:Ensembl.
GO; GO:0033160; P:positive regulation of protein import into nucleus, translocation; IEA:Ensembl.
GO; GO:0046777; P:protein autophosphorylation; IEA:Ensembl.
GO; GO:0072593; P:reactive oxygen species metabolic process; IEA:Ensembl.
GO; GO:2000172; P:regulation of branching morphogenesis of a nerve; IEA:Ensembl.
GO; GO:1905289; P:regulation of CAMKK-AMPK signaling cascade; IEA:Ensembl.
GO; GO:0061001; P:regulation of dendritic spine morphogenesis; IEA:Ensembl.
GO; GO:0035564; P:regulation of kidney size; IEA:Ensembl.
GO; GO:0040012; P:regulation of locomotion; IEA:Ensembl.
GO; GO:0035751; P:regulation of lysosomal lumen pH; IEA:Ensembl.
GO; GO:0051900; P:regulation of mitochondrial depolarization; IEA:Ensembl.
GO; GO:1902692; P:regulation of neuroblast proliferation; IEA:Ensembl.
GO; GO:0014041; P:regulation of neuron maturation; IEA:Ensembl.
GO; GO:0010738; P:regulation of protein kinase A signaling; IEA:Ensembl.
GO; GO:1905279; P:regulation of retrograde transport, endosome to Golgi; IEA:Ensembl.
GO; GO:0051966; P:regulation of synaptic transmission, glutamatergic; IEA:Ensembl.
GO; GO:2000300; P:regulation of synaptic vesicle exocytosis; IEA:Ensembl.
GO; GO:0022028; P:tangential migration from the subventricular zone to the olfactory bulb; IEA:Ensembl.
GO; GO:1904887; P:Wnt signalosome assembly; IEA:Ensembl.
Gene3D; 1.25.10.10; -; 2.
Gene3D; 1.25.40.20; -; 1.
Gene3D; 2.130.10.10; -; 1.
Gene3D; 3.80.10.10; -; 3.
InterPro; IPR036770; Ankyrin_rpt-contain_sf.
InterPro; IPR011989; ARM-like.
InterPro; IPR016024; ARM-type_fold.
InterPro; IPR032171; COR.
InterPro; IPR011009; Kinase-like_dom_sf.
InterPro; IPR001611; Leu-rich_rpt.
InterPro; IPR025875; Leu-rich_rpt_4.
InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
InterPro; IPR032675; LRR_dom_sf.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR000719; Prot_kinase_dom.
InterPro; IPR020859; ROC_dom.
InterPro; IPR008271; Ser/Thr_kinase_AS.
InterPro; IPR005225; Small_GTP-bd_dom.
InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
InterPro; IPR036322; WD40_repeat_dom_sf.
Pfam; PF16095; COR; 1.
Pfam; PF12799; LRR_4; 1.
Pfam; PF00069; Pkinase; 1.
SMART; SM00369; LRR_TYP; 7.
SMART; SM00220; S_TKc; 1.
SUPFAM; SSF48371; SSF48371; 3.
SUPFAM; SSF50978; SSF50978; 1.
SUPFAM; SSF52540; SSF52540; 1.
SUPFAM; SSF56112; SSF56112; 1.
TIGRFAMs; TIGR00231; small_GTP; 1.
PROSITE; PS51450; LRR; 12.
PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
PROSITE; PS51424; ROC; 1.
4: Predicted;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000001074};
Leucine-rich repeat {ECO:0000256|SAAS:SAAS00537711};
Reference proteome {ECO:0000313|Proteomes:UP000001074};
Repeat {ECO:0000256|SAAS:SAAS00537628}.
DOMAIN 1331 1514 Roc. {ECO:0000259|PROSITE:PS51424}.
DOMAIN 1883 2149 Protein kinase.
{ECO:0000259|PROSITE:PS50011}.
COILED 320 347 {ECO:0000256|SAM:Coils}.
SEQUENCE 2530 AA; 286099 MW; AFF8CFF1F7B01E7D CRC64;
MASGSCQGCE EEDEETLKKL IVRLNNLQEG KQIETLVQIL EDMQVFTYAD HAAKLFQGKN
VHVPLLIVLD SYVRVACVQQ VKFSCRLFPL LFGKLTDNMG GGGRINDWSI LDYSQQKLII
KMLTVHNASI NLSMVGLKAL DLLLTSGKIT LLILDEESDI FLLIFDAMKK FSANDEVQKL
GCKALHVLFE RVSEEQLTEF VENKDYMILL TALKNFKDEE EIVLYVLRCL HSLASPCNNV
EVLMSGNVRC YNIVVEAMKA FPVNEKIQEV SCCLLHRLTL GNFFNILVLN EVHEFVVEAV
QRYSENATLQ IAGLSCLALL TETIFLNQDL EEKNENEENE DDEEEEKLFW LKACYKALTW
HRKNKHVQEA ACWALNNLLM YQNSLHEKIG DEDGQFPAHR EVMLSMLMHS SSKEVFQASA
NALCTLLEQN VNFRKILLSK GIYLNVLEFM KRHVHSPEVT ESGCKMLNHL FEGSNISPDV
MAAVAPKIIT VMKSHGTSLS VQLEALRAIL HFMLPGMPEE FTEDTEYQHK LKMVTNQCFR
NDIHKLVLGS LNRFIGNPGI QKCGLKVISS IARFPDALEV LSLEGAIESV LQTLQMYPDD
QEIQRLGLSL IGCLITTKNL TLGTENLLAK ILVSSLQRFK DITELQTKGF QTVLTMLERS
ESFSKLLVHY SFDSVIFHQM SSSLMEQKDQ QFLNLCCKCF AKLAMDDELK GVMLERACDQ
NNSIMVECLL LLGADANQAK EGTSLICQVC EKASSPKLVE LLLNSGSREQ DVRKALAISI
GKGDSQIISL LLKRLALDLA NNSICLGGFC IGKIEPSWLG PLFPDKTCNS RKEINIGSTL
ARMVLRYQMK SSVAEGAASG SDGDLSEQVL DKFDQWTFIP ESYVDSVFGQ SDDLDSEEIG
SEGSFLVKKK SSSISVGEFY RDPALQRCSP NLQSHSNSLG PIFDQEDLLK RKRKILSSDD
SLRSSKLPSH MRNSDSTSSL ASEREYITSL DLSANELRDI DALSQKCCIS GHLEHLARLE
LHQNALTGFP QRLCEVLKCL THLDLHSNKF TAFPSYLLKM NCLANLDVSR NDIGPSVVLD
PAVKCPTLKQ FNLSYNQLSS VPENLGDVAE KLEQLTLEGN KISGMCSPLS LKELKILNLS
KNHISSLSED FLEACPKVES FSARMNSLAA MPFLPSSLTN IKLSQNRFTC VPEAILNLPH
LRSLDMSSNE IKYLPSPAHW KSLNLRELLF SHNQISILDL SEKAHAWSRV EKLHLSHNKL
KEIPPEIGCL ENLTSLDVSY NLELRSFPNE MGKLSKIWDL PLDELRLNFD FKHIGCKAKD
IIRFLQQRLK KAVPYNRMKL MIVGNTGSGK TTLLQQLMKT KKSDVGMQSA TVGIDVRDWP
IQIRGKRKKD LILNVWDFAG REEFYSTHPH FMTPRSLYLA VYDLSKGQAE VDAMKPWLFN
IKARASSSPV ILVGTHLDVS DEKQRKACIS KINKELLNKR GFPAIRDYHF VNATEESDAL
AKLRKTIINE SLNFKIRDQP VVGQMIPDCY VELEKIILSE RKNVPIEFPV IDRKRLLQLV
KENQLQLDEN ELPHAVHFLN ESGVLLHFQD PALQLSNLYF VEPKWLCKVM AQILTEKVEG
LPKYPKGIIS RRSVEKFLSK KKRFPKNYTQ QYFKLLEKFQ IALPIGEEYL LVPSSLSDHR
PVIELPHCEN SEIIIRLYEM PYFPMGFWSR LINRLLEISP YMLSGREQAL RPNRMYWRQG
IYLNWSPEAY CLVESEVLDN HPESFLKITV PSCRKGCIIL GQVVDHIDSL MEEWFPGLLE
TDICGEGETL LKKWALYSFN DGEEHEKILL DDLMKKAEEG DLLINPDQPR LTLPISQIAP
DLILADLPRN IMLNSEKLEF QQAPEFLLEG DGSFGSVYRA TYEGDEVAVK IFNKHTSLRL
LRQELVVLCH HRHPSLIFLL AAGIRPRMLV MELAQGSLDR LLQQDTASLT RTLQHRIALH
VADGLRYLHS AMIIYRDLKP HNVLLFTLYP NAAIIAKIAD YGIAQYCCRM GIKTSEGTPG
FRAPEVARGN VIYNQQADVY SFGLLLYDIL TTGGRIAEGL KFPNEFDELA IQGKLPDPVK
EYGCAPWPMV EKLIKRCLKE NPQERPTSAQ VFDILNSAEL ICLMRHISIP KSFTVECMVA
ANQSCKNASV WLGCGPRDRG QLSLLDLTTE RLTSEEVTNS RILCLALVHL PVEKESWIVC
GTQSGELLVI NSEDGKKMHT LEKMTDSVTC LHCNSISKQS KQKNFLLVGT ADGNLAIFED
KSVKCKGAAP LKILNIGNIS TPLMCLSESV NSTEKNIMWG GCGTKLFSFS DDFTIQKLIE
TRTTQLFSYA AVSDSNIIAV VVDRALYIAK KNSPFVEVWD KKTEKLCELI DCAHFLKEEM
VKVNKESRHS MSYSGRVKTL CLQKNTALWI GTGGGYMLLL DISTLRLIRI IHDFCDSVRV
MMTAQIGNLK NAMLVLGYTW KSTEDMQHQK ELQSCLSIWD INLPHEVQNL EKHIEVRKEL
AERMRRITVE


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