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Leucine rich repeat kinase 2

 G3WVN1_SARHA            Unreviewed;      2527 AA.
G3WVN1;
16-NOV-2011, integrated into UniProtKB/TrEMBL.
16-NOV-2011, sequence version 1.
25-APR-2018, entry version 57.
SubName: Full=Leucine rich repeat kinase 2 {ECO:0000313|Ensembl:ENSSHAP00000019486};
Name=LRRK2 {ECO:0000313|Ensembl:ENSSHAP00000019486};
Sarcophilus harrisii (Tasmanian devil) (Sarcophilus laniarius).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus.
NCBI_TaxID=9305 {ECO:0000313|Ensembl:ENSSHAP00000019486, ECO:0000313|Proteomes:UP000007648};
[1] {ECO:0000313|Ensembl:ENSSHAP00000019486}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=21709235; DOI=10.1073/pnas.1102838108;
Miller W., Hayes V.M., Ratan A., Petersen D.C., Wittekindt N.E.,
Miller J., Walenz B., Knight J., Qi J., Zhao F., Wang Q.,
Bedoya-Reina O.C., Katiyar N., Tomsho L.P., Kasson L.M., Hardie R.A.,
Woodbridge P., Tindall E.A., Bertelsen M.F., Dixon D., Pyecroft S.,
Helgen K.M., Lesk A.M., Pringle T.H., Patterson N., Zhang Y.,
Kreiss A., Woods G.M., Jones M.E., Schuster S.C.;
"Genetic diversity and population structure of the endangered
marsupial Sarcophilus harrisii (Tasmanian devil).";
Proc. Natl. Acad. Sci. U.S.A. 108:12348-12353(2011).
[2] {ECO:0000313|Ensembl:ENSSHAP00000019486}
IDENTIFICATION.
Ensembl;
Submitted (SEP-2011) to UniProtKB.
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EMBL; AEFK01194194; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AEFK01194195; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AEFK01194196; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AEFK01194197; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AEFK01194198; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AEFK01194199; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AEFK01194200; -; NOT_ANNOTATED_CDS; Genomic_DNA.
STRING; 9305.ENSSHAP00000019486; -.
Ensembl; ENSSHAT00000019643; ENSSHAP00000019486; ENSSHAG00000016549.
eggNOG; KOG0192; Eukaryota.
eggNOG; KOG0619; Eukaryota.
eggNOG; COG1100; LUCA.
eggNOG; COG4886; LUCA.
GeneTree; ENSGT00910000144054; -.
InParanoid; G3WVN1; -.
OMA; FKIRDQP; -.
OrthoDB; EOG091G003N; -.
TreeFam; TF313679; -.
Proteomes; UP000007648; Unassembled WGS sequence.
GO; GO:0044753; C:amphisome; IEA:Ensembl.
GO; GO:0044754; C:autolysosome; IEA:Ensembl.
GO; GO:0099400; C:caveola neck; IEA:Ensembl.
GO; GO:0032473; C:cytoplasmic side of mitochondrial outer membrane; IEA:Ensembl.
GO; GO:0005829; C:cytosol; IEA:Ensembl.
GO; GO:0032839; C:dendrite cytoplasm; IEA:Ensembl.
GO; GO:0005783; C:endoplasmic reticulum; IEA:Ensembl.
GO; GO:0005794; C:Golgi apparatus; IEA:Ensembl.
GO; GO:0005798; C:Golgi-associated vesicle; IEA:Ensembl.
GO; GO:0030426; C:growth cone; IEA:Ensembl.
GO; GO:0016234; C:inclusion body; IEA:Ensembl.
GO; GO:0005902; C:microvillus; IEA:Ensembl.
GO; GO:0097487; C:multivesicular body, internal vesicle; IEA:Ensembl.
GO; GO:0005634; C:nucleus; IEA:Ensembl.
GO; GO:0043204; C:perikaryon; IEA:Ensembl.
GO; GO:1990909; C:Wnt signalosome; IEA:Ensembl.
GO; GO:0003779; F:actin binding; IEA:Ensembl.
GO; GO:0005524; F:ATP binding; IEA:InterPro.
GO; GO:0030276; F:clathrin binding; IEA:Ensembl.
GO; GO:0005525; F:GTP binding; IEA:Ensembl.
GO; GO:0034211; F:GTP-dependent protein kinase activity; IEA:Ensembl.
GO; GO:0005096; F:GTPase activator activity; IEA:Ensembl.
GO; GO:0003924; F:GTPase activity; IEA:Ensembl.
GO; GO:0044325; F:ion channel binding; IEA:Ensembl.
GO; GO:0004708; F:MAP kinase kinase activity; IEA:Ensembl.
GO; GO:0036479; F:peroxidase inhibitor activity; IEA:Ensembl.
GO; GO:0042803; F:protein homodimerization activity; IEA:Ensembl.
GO; GO:0051018; F:protein kinase A binding; IEA:Ensembl.
GO; GO:0017048; F:Rho GTPase binding; IEA:Ensembl.
GO; GO:0017075; F:syntaxin-1 binding; IEA:Ensembl.
GO; GO:0015631; F:tubulin binding; IEA:Ensembl.
GO; GO:0000186; P:activation of MAPKK activity; IEA:Ensembl.
GO; GO:0019722; P:calcium-mediated signaling; IEA:Ensembl.
GO; GO:1903351; P:cellular response to dopamine; IEA:Ensembl.
GO; GO:0071287; P:cellular response to manganese ion; IEA:Ensembl.
GO; GO:0034599; P:cellular response to oxidative stress; IEA:Ensembl.
GO; GO:0009267; P:cellular response to starvation; IEA:Ensembl.
GO; GO:0008340; P:determination of adult lifespan; IEA:Ensembl.
GO; GO:0006897; P:endocytosis; IEA:Ensembl.
GO; GO:0035640; P:exploration behavior; IEA:Ensembl.
GO; GO:0007030; P:Golgi organization; IEA:Ensembl.
GO; GO:0046039; P:GTP metabolic process; IEA:Ensembl.
GO; GO:0048312; P:intracellular distribution of mitochondria; IEA:Ensembl.
GO; GO:1902902; P:negative regulation of autophagosome assembly; IEA:Ensembl.
GO; GO:1902236; P:negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway; IEA:Ensembl.
GO; GO:0034260; P:negative regulation of GTPase activity; IEA:Ensembl.
GO; GO:1903206; P:negative regulation of hydrogen peroxide-induced cell death; IEA:Ensembl.
GO; GO:1901215; P:negative regulation of neuron death; IEA:Ensembl.
GO; GO:0032091; P:negative regulation of protein binding; IEA:Ensembl.
GO; GO:0010955; P:negative regulation of protein processing; IEA:Ensembl.
GO; GO:1903215; P:negative regulation of protein targeting to mitochondrion; IEA:Ensembl.
GO; GO:1903125; P:negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation; IEA:Ensembl.
GO; GO:0007528; P:neuromuscular junction development; IEA:Ensembl.
GO; GO:0070997; P:neuron death; IEA:Ensembl.
GO; GO:0048812; P:neuron projection morphogenesis; IEA:Ensembl.
GO; GO:0018105; P:peptidyl-serine phosphorylation; IEA:Ensembl.
GO; GO:0010508; P:positive regulation of autophagy; IEA:Ensembl.
GO; GO:0090263; P:positive regulation of canonical Wnt signaling pathway; IEA:Ensembl.
GO; GO:0060161; P:positive regulation of dopamine receptor signaling pathway; IEA:Ensembl.
GO; GO:0043068; P:positive regulation of programmed cell death; IEA:Ensembl.
GO; GO:1902499; P:positive regulation of protein autoubiquitination; IEA:Ensembl.
GO; GO:0032092; P:positive regulation of protein binding; IEA:Ensembl.
GO; GO:0046777; P:protein autophosphorylation; IEA:Ensembl.
GO; GO:0072593; P:reactive oxygen species metabolic process; IEA:Ensembl.
GO; GO:2000172; P:regulation of branching morphogenesis of a nerve; IEA:Ensembl.
GO; GO:1905289; P:regulation of CAMKK-AMPK signaling cascade; IEA:Ensembl.
GO; GO:0061001; P:regulation of dendritic spine morphogenesis; IEA:Ensembl.
GO; GO:0040012; P:regulation of locomotion; IEA:Ensembl.
GO; GO:0035751; P:regulation of lysosomal lumen pH; IEA:Ensembl.
GO; GO:0051900; P:regulation of mitochondrial depolarization; IEA:Ensembl.
GO; GO:1902692; P:regulation of neuroblast proliferation; IEA:Ensembl.
GO; GO:0014041; P:regulation of neuron maturation; IEA:Ensembl.
GO; GO:1905279; P:regulation of retrograde transport, endosome to Golgi; IEA:Ensembl.
GO; GO:2000300; P:regulation of synaptic vesicle exocytosis; IEA:Ensembl.
GO; GO:0022028; P:tangential migration from the subventricular zone to the olfactory bulb; IEA:Ensembl.
GO; GO:1904887; P:Wnt signalosome assembly; IEA:Ensembl.
Gene3D; 1.25.10.10; -; 1.
Gene3D; 1.25.40.20; -; 1.
Gene3D; 2.130.10.10; -; 1.
Gene3D; 3.80.10.10; -; 2.
InterPro; IPR036770; Ankyrin_rpt-contain_sf.
InterPro; IPR011989; ARM-like.
InterPro; IPR016024; ARM-type_fold.
InterPro; IPR032171; COR.
InterPro; IPR011009; Kinase-like_dom_sf.
InterPro; IPR001611; Leu-rich_rpt.
InterPro; IPR025875; Leu-rich_rpt_4.
InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
InterPro; IPR032675; LRR_dom_sf.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR000719; Prot_kinase_dom.
InterPro; IPR020859; ROC_dom.
InterPro; IPR008271; Ser/Thr_kinase_AS.
InterPro; IPR005225; Small_GTP-bd_dom.
InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
InterPro; IPR036322; WD40_repeat_dom_sf.
Pfam; PF16095; COR; 1.
Pfam; PF12799; LRR_4; 1.
Pfam; PF13855; LRR_8; 2.
Pfam; PF00069; Pkinase; 1.
SMART; SM00369; LRR_TYP; 7.
SMART; SM00220; S_TKc; 1.
SUPFAM; SSF48371; SSF48371; 2.
SUPFAM; SSF48403; SSF48403; 1.
SUPFAM; SSF50978; SSF50978; 1.
SUPFAM; SSF52540; SSF52540; 1.
SUPFAM; SSF56112; SSF56112; 1.
TIGRFAMs; TIGR00231; small_GTP; 1.
PROSITE; PS51450; LRR; 11.
PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
PROSITE; PS51424; ROC; 1.
4: Predicted;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000007648};
Leucine-rich repeat {ECO:0000256|SAAS:SAAS00537711};
Reference proteome {ECO:0000313|Proteomes:UP000007648};
Repeat {ECO:0000256|SAAS:SAAS00537628}.
DOMAIN 1330 1512 Roc. {ECO:0000259|PROSITE:PS51424}.
DOMAIN 1881 2140 Protein kinase.
{ECO:0000259|PROSITE:PS50011}.
COILED 7 27 {ECO:0000256|SAM:Coils}.
SEQUENCE 2527 AA; 286990 MW; 88784314DA88D997 CRC64;
MASSRSLRSE EKEEESLKKL IVRLQNVQEG KQIETLIQIL EDMLMLTYSD RASKLFQGKN
VHMPLLVVLD SYMRVAGVQQ VGWSLICKLT EICPDIMQSL MGPQDVGKDW EILGVHQLIL
KMLTVHNANI TLSLIGLKAL DQLLTSDLMT LRILEEDCSD VFTLIFDAMH TFITNEEIQK
FGCKILHVLF QKVSEEQLTE FIENKDYMFL LNALKRFNHE EEVVLHVLHS LHSLALPCSN
VEVLMSGNVR CYNIVVEAMK MFSSSEKIQE VGCCLLHRLT LDNFFNILVL NEVHEIIVKA
VKKYSENATL QIAALSCLAL LTETIILNQD LEEKKKNQDD DEDNKLYWLE ASYTALKLHK
KNTYVQEAAC WALNNLFMYQ RNLHENIGDE DDQYPVHREI LLSMLMHSST KEVFQATANA
LSTLSEQNVN IRKALLSKGI YWNVMRFMMK HLDFPEVAES GCKMLNHLLE GSNLHVDVMT
SVTSHIIKVM KSHKTSSTVQ LEALRTILHI IVPDSKKEPE EDVSLNINLK VVKNQCLLND
IHRLVLSALN KFIGNPGIQI CGLKIISSLA NCSGALEMFS QEGALDSILH TLQMYPDNRV
IQYVGLSLLG CLITKKNLCT ETQDLLANIL VSSLQRFKDV AEVQISGFQT TLAILELSLS
FAKLLLSHHS YDSLIFYQMS RCFNEQADHQ FRNLCCKFFA KITCDDDIKN ILLARACAEN
NSVMAECLLL LGADINKVTG KTSLICQVCE KESSPKLVEL LLDNGPREQE IRKALMISIK
KNNSHIISLL LRKLGLDLAN SSICLGGFCM GKIEPSWLSP LFPDKASNLR KQTNTGSSLA
RMVLRYQLKS LSEDEPISGS DGSFPEDDLD KFGDWTFIPD SSLDCVFGQS DDLDSEGSEG
SIFMKKKSSS FNVGDLYRDP ALQHGSPTLE RHPNSMEASF DREELLKQKR DLKFSSDDSV
QGSSKLQSHL RQSESFFSLT LEREYIKSLD LSANELEDID GISKKSCLND HLIHLEKLEL
HQNALTRIPQ QLCETLKCLT YLDLHSNKIT SIPAYLLKMN SIANLDISRN DIGPSIILDP
SIRCPTLKQL NLSYNQLYSV PEHLADVTEN LEQLFLEGNK ISEIHSPLCL KELKFLNLSK
NHILSITEDF FEACRKLETF SARMNSLVAV PFLPSSITIL NLSQNKFTCI PEVILNLPHL
RSLDLSSNEI HNLPGPVHWK SLNLRELLFN HNQISILDLS EKACAWSRME KLHLSHNKLK
EIPPEIGFLE NLTSLDVSYN LELRSFPNEM GKLTKIWDLP LDELHLNIDF KHIGCKTKDI
IRFLQQRLKK AVPYNRMKLM VVGNTGSGKT TLLQQLMKYK KTDLSTLSTT VGIDVKDWSI
QLRSKGKKEL ILNVWDFAGR EEFYSTHPHF MTQRALYLAV YDLSKGHAEV DAMKPWLFNI
KARASSSPVI LIGTHLDVSD EKQRKASISK ITRELLNKRG FPEIRDYHFV NATEHEALVK
LRKSIIKESL NFKIRDQPVV GQLIPDCYLE LEKKILLERK NVPTEFPVIS QKRLVQLVKE
NHLQLDENEL PHAIHFLNES GVLLHFQDPA LQLSDLYFVE PRWLCKMMAQ ILTVKVEGFA
KYPKGIIQRS DVEKFLSKKS KFPKNYMSQY FKLLEKFQIA LPIGEEHLLV PSSLSDQRPV
IELPHCENSE VIVRLYEMPY FPMGFWSRLI SRLLEISPYI LSGRERALRP NRMYWRQGIY
LNWSPEAYCL VESSILDNSS ESILKITAPS CRKGCIILGQ VVDHIDSLME EWFPGLLEID
VCGEGETLLK KWALYSFNDG EEQQKILLDD LMKKTEEGDL LINPDQPRLT IPIGHIAPDL
ILADLPRNII LNHDELEFEQ APEFLLEGDG GFGSVYRASY KGEEVAVKIF NKHTSLRLLR
QELVVLCHLH HPSLISLLAA GIRPRMLVME LAPKGSLDRL LQQDKASLTR TLQHRIALHV
ADGLRYLHAS MIIYRDLKPH NVLLFTLYPN SAIIAKIADY GIAQYCCRMG IKTSEGTAGF
RAPEVARGNV IYNQQADVYS FGLLLYDILT TGGRILEGLK FPNEFDELAI HGKLPDPVKE
YGCTPWPKVE NLIKKCLKEN PQERPTSAQV YEILNSAELI CLMRYILIPK LFVAECMVAT
NQNNKNAVVW LGSGNNARGQ LSCLEINTER HISKDVTDSR ILCLALVYIH VEKESWIVAG
TQSGILLAVK TDDDKKSHML QRMTDSVTCL YCNSFSKQST QKNFLLVGTA DGRLAIFEDK
NVKFEGAPPL KTLNIGNVST PLMCLNESIY SSEKNIIWGG CGTKIFSLSN DFSIQKLIET
KTNQLFSYAT FSDSNIISIV VDKAIYIAKK NSHFVEVWDK KTEKLCVLID CVQFLKEHIG
SKESKHKMTY SGRVKTLCLQ KNTALWIGTG GGHILLVDLS THRIIHIIQN FCNSVRALMT
VQLGSLKNVM LVLGYSQKSN ENTQDQKEME SCLSVWDINL PHEVENLEKH TEVRKELAEK
MKSISMD


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