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Leucine rich repeat kinase 2

 W5QFE4_SHEEP            Unreviewed;      2535 AA.
W5QFE4;
16-APR-2014, integrated into UniProtKB/TrEMBL.
16-APR-2014, sequence version 1.
22-NOV-2017, entry version 34.
SubName: Full=Leucine rich repeat kinase 2 {ECO:0000313|Ensembl:ENSOARP00000021442};
Name=LRRK2 {ECO:0000313|Ensembl:ENSOARP00000021442};
Ovis aries (Sheep).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia;
Pecora; Bovidae; Caprinae; Ovis.
NCBI_TaxID=9940 {ECO:0000313|Ensembl:ENSOARP00000021442, ECO:0000313|Proteomes:UP000002356};
[1] {ECO:0000313|Ensembl:ENSOARP00000021442, ECO:0000313|Proteomes:UP000002356}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Texel {ECO:0000313|Ensembl:ENSOARP00000021442};
PubMed=20809919; DOI=10.1111/j.1365-2052.2010.02100.x;
Archibald A.L., Cockett N.E., Dalrymple B.P., Faraut T., Kijas J.W.,
Maddox J.F., McEwan J.C., Hutton Oddy V., Raadsma H.W., Wade C.,
Wang J., Wang W., Xun X.;
"The sheep genome reference sequence: a work in progress.";
Anim. Genet. 41:449-453(2010).
[2] {ECO:0000313|Ensembl:ENSOARP00000021442}
IDENTIFICATION.
Ensembl;
Submitted (FEB-2014) to UniProtKB.
-!- CAUTION: The sequence shown here is derived from an Ensembl
automatic analysis pipeline and should be considered as
preliminary data. {ECO:0000313|Ensembl:ENSOARP00000021442}.
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EMBL; AMGL01080839; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AMGL01080840; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AMGL01080841; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AMGL01080842; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AMGL01080843; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AMGL01080844; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AMGL01080845; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AMGL01080846; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AMGL01080847; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; AMGL01080848; -; NOT_ANNOTATED_CDS; Genomic_DNA.
Ensembl; ENSOART00000021742; ENSOARP00000021442; ENSOARG00000019970.
GeneTree; ENSGT00530000063477; -.
OMA; FKIRDQP; -.
OrthoDB; EOG091G003N; -.
Proteomes; UP000002356; Chromosome 3.
GO; GO:0044753; C:amphisome; IEA:Ensembl.
GO; GO:0044754; C:autolysosome; IEA:Ensembl.
GO; GO:0030424; C:axon; IEA:Ensembl.
GO; GO:0099400; C:caveola neck; IEA:Ensembl.
GO; GO:0032473; C:cytoplasmic side of mitochondrial outer membrane; IEA:Ensembl.
GO; GO:0005829; C:cytosol; IEA:Ensembl.
GO; GO:0032839; C:dendrite cytoplasm; IEA:Ensembl.
GO; GO:0005783; C:endoplasmic reticulum; IEA:Ensembl.
GO; GO:0070062; C:extracellular exosome; IEA:Ensembl.
GO; GO:0005798; C:Golgi-associated vesicle; IEA:Ensembl.
GO; GO:0030426; C:growth cone; IEA:Ensembl.
GO; GO:0016234; C:inclusion body; IEA:Ensembl.
GO; GO:0030529; C:intracellular ribonucleoprotein complex; IEA:Ensembl.
GO; GO:0005902; C:microvillus; IEA:Ensembl.
GO; GO:0005743; C:mitochondrial inner membrane; IEA:Ensembl.
GO; GO:0005759; C:mitochondrial matrix; IEA:Ensembl.
GO; GO:0097487; C:multivesicular body, internal vesicle; IEA:Ensembl.
GO; GO:0005634; C:nucleus; IEA:Ensembl.
GO; GO:0043204; C:perikaryon; IEA:Ensembl.
GO; GO:0098794; C:postsynapse; IEA:GOC.
GO; GO:0008021; C:synaptic vesicle; IEA:Ensembl.
GO; GO:0005802; C:trans-Golgi network; IEA:Ensembl.
GO; GO:1990909; C:Wnt signalosome; IEA:Ensembl.
GO; GO:0003779; F:actin binding; IEA:Ensembl.
GO; GO:0005524; F:ATP binding; IEA:InterPro.
GO; GO:1904713; F:beta-catenin destruction complex binding; IEA:Ensembl.
GO; GO:0030276; F:clathrin binding; IEA:Ensembl.
GO; GO:0005525; F:GTP binding; IEA:Ensembl.
GO; GO:0034211; F:GTP-dependent protein kinase activity; IEA:Ensembl.
GO; GO:0005096; F:GTPase activator activity; IEA:Ensembl.
GO; GO:0003924; F:GTPase activity; IEA:Ensembl.
GO; GO:0044325; F:ion channel binding; IEA:Ensembl.
GO; GO:0004708; F:MAP kinase kinase activity; IEA:Ensembl.
GO; GO:0036479; F:peroxidase inhibitor activity; IEA:Ensembl.
GO; GO:0042803; F:protein homodimerization activity; IEA:Ensembl.
GO; GO:0051018; F:protein kinase A binding; IEA:Ensembl.
GO; GO:0017048; F:Rho GTPase binding; IEA:Ensembl.
GO; GO:0017075; F:syntaxin-1 binding; IEA:Ensembl.
GO; GO:0015631; F:tubulin binding; IEA:Ensembl.
GO; GO:0000186; P:activation of MAPKK activity; IEA:Ensembl.
GO; GO:0019722; P:calcium-mediated signaling; IEA:Ensembl.
GO; GO:0034613; P:cellular protein localization; IEA:Ensembl.
GO; GO:1903351; P:cellular response to dopamine; IEA:Ensembl.
GO; GO:0071287; P:cellular response to manganese ion; IEA:Ensembl.
GO; GO:0034599; P:cellular response to oxidative stress; IEA:Ensembl.
GO; GO:0009267; P:cellular response to starvation; IEA:Ensembl.
GO; GO:0008340; P:determination of adult lifespan; IEA:Ensembl.
GO; GO:0006897; P:endocytosis; IEA:Ensembl.
GO; GO:0060079; P:excitatory postsynaptic potential; IEA:Ensembl.
GO; GO:0007030; P:Golgi organization; IEA:Ensembl.
GO; GO:0046039; P:GTP metabolic process; IEA:Ensembl.
GO; GO:0048312; P:intracellular distribution of mitochondria; IEA:Ensembl.
GO; GO:0035641; P:locomotory exploration behavior; IEA:Ensembl.
GO; GO:1902902; P:negative regulation of autophagosome assembly; IEA:Ensembl.
GO; GO:1902236; P:negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway; IEA:Ensembl.
GO; GO:0090394; P:negative regulation of excitatory postsynaptic potential; IEA:Ensembl.
GO; GO:0034260; P:negative regulation of GTPase activity; IEA:Ensembl.
GO; GO:1903206; P:negative regulation of hydrogen peroxide-induced cell death; IEA:Ensembl.
GO; GO:1901215; P:negative regulation of neuron death; IEA:Ensembl.
GO; GO:0032091; P:negative regulation of protein binding; IEA:Ensembl.
GO; GO:0001933; P:negative regulation of protein phosphorylation; IEA:Ensembl.
GO; GO:0010955; P:negative regulation of protein processing; IEA:Ensembl.
GO; GO:1903215; P:negative regulation of protein targeting to mitochondrion; IEA:Ensembl.
GO; GO:1903125; P:negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation; IEA:Ensembl.
GO; GO:0007528; P:neuromuscular junction development; IEA:Ensembl.
GO; GO:0070997; P:neuron death; IEA:Ensembl.
GO; GO:0048812; P:neuron projection morphogenesis; IEA:Ensembl.
GO; GO:0018105; P:peptidyl-serine phosphorylation; IEA:Ensembl.
GO; GO:0010508; P:positive regulation of autophagy; IEA:Ensembl.
GO; GO:0090263; P:positive regulation of canonical Wnt signaling pathway; IEA:Ensembl.
GO; GO:0060161; P:positive regulation of dopamine receptor signaling pathway; IEA:Ensembl.
GO; GO:1901727; P:positive regulation of histone deacetylase activity; IEA:Ensembl.
GO; GO:0043068; P:positive regulation of programmed cell death; IEA:Ensembl.
GO; GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IEA:Ensembl.
GO; GO:1902499; P:positive regulation of protein autoubiquitination; IEA:Ensembl.
GO; GO:0032092; P:positive regulation of protein binding; IEA:Ensembl.
GO; GO:0033160; P:positive regulation of protein import into nucleus, translocation; IEA:Ensembl.
GO; GO:0046777; P:protein autophosphorylation; IEA:Ensembl.
GO; GO:0072593; P:reactive oxygen species metabolic process; IEA:Ensembl.
GO; GO:2000172; P:regulation of branching morphogenesis of a nerve; IEA:Ensembl.
GO; GO:1905289; P:regulation of CAMKK-AMPK signaling cascade; IEA:Ensembl.
GO; GO:0061001; P:regulation of dendritic spine morphogenesis; IEA:Ensembl.
GO; GO:0035564; P:regulation of kidney size; IEA:Ensembl.
GO; GO:0040012; P:regulation of locomotion; IEA:Ensembl.
GO; GO:0035751; P:regulation of lysosomal lumen pH; IEA:Ensembl.
GO; GO:0051900; P:regulation of mitochondrial depolarization; IEA:Ensembl.
GO; GO:1902692; P:regulation of neuroblast proliferation; IEA:Ensembl.
GO; GO:0014041; P:regulation of neuron maturation; IEA:Ensembl.
GO; GO:0010738; P:regulation of protein kinase A signaling; IEA:Ensembl.
GO; GO:1905279; P:regulation of retrograde transport, endosome to Golgi; IEA:Ensembl.
GO; GO:0051966; P:regulation of synaptic transmission, glutamatergic; IEA:Ensembl.
GO; GO:2000300; P:regulation of synaptic vesicle exocytosis; IEA:Ensembl.
GO; GO:0022028; P:tangential migration from the subventricular zone to the olfactory bulb; IEA:Ensembl.
GO; GO:1904887; P:Wnt signalosome assembly; IEA:Ensembl.
Gene3D; 1.25.10.10; -; 2.
Gene3D; 2.130.10.10; -; 1.
Gene3D; 3.80.10.10; -; 4.
InterPro; IPR011989; ARM-like.
InterPro; IPR016024; ARM-type_fold.
InterPro; IPR032171; COR.
InterPro; IPR011009; Kinase-like_dom_sf.
InterPro; IPR001611; Leu-rich_rpt.
InterPro; IPR025875; Leu-rich_rpt_4.
InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
InterPro; IPR032675; LRR_dom_sf.
InterPro; IPR027417; P-loop_NTPase.
InterPro; IPR000719; Prot_kinase_dom.
InterPro; IPR017441; Protein_kinase_ATP_BS.
InterPro; IPR020859; ROC_dom.
InterPro; IPR008271; Ser/Thr_kinase_AS.
InterPro; IPR005225; Small_GTP-bd_dom.
InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
InterPro; IPR036322; WD40_repeat_dom_sf.
Pfam; PF16095; COR; 1.
Pfam; PF12799; LRR_4; 1.
Pfam; PF13855; LRR_8; 1.
Pfam; PF00069; Pkinase; 1.
SMART; SM00369; LRR_TYP; 7.
SMART; SM00220; S_TKc; 1.
SUPFAM; SSF48371; SSF48371; 2.
SUPFAM; SSF50978; SSF50978; 2.
SUPFAM; SSF52058; SSF52058; 1.
SUPFAM; SSF52540; SSF52540; 1.
SUPFAM; SSF56112; SSF56112; 1.
TIGRFAMs; TIGR00231; small_GTP; 1.
PROSITE; PS51450; LRR; 12.
PROSITE; PS00107; PROTEIN_KINASE_ATP; 1.
PROSITE; PS50011; PROTEIN_KINASE_DOM; 1.
PROSITE; PS00108; PROTEIN_KINASE_ST; 1.
PROSITE; PS51424; ROC; 1.
4: Predicted;
Coiled coil {ECO:0000256|SAM:Coils};
Complete proteome {ECO:0000313|Proteomes:UP000002356};
Leucine-rich repeat {ECO:0000256|SAAS:SAAS00537711};
Reference proteome {ECO:0000313|Proteomes:UP000002356};
Repeat {ECO:0000256|SAAS:SAAS00537628}.
DOMAIN 1331 1514 Roc. {ECO:0000259|PROSITE:PS51424}.
DOMAIN 1885 2144 Protein kinase.
{ECO:0000259|PROSITE:PS50011}.
COILED 320 347 {ECO:0000256|SAM:Coils}.
SEQUENCE 2535 AA; 287092 MW; BCC4B560E1F8A7A4 CRC64;
LASGSCQGCE EEDEESLKKL IVRLNNVQEG KQIETLVQIL EDMLVFTYAD HASKLFQDKN
VHVPLLIVLD SYMRVASVQQ VGWSLLCKLI EICPNTMQSL MGPHDIGHDW EVLGVHQLIL
KMLTVHNASV NLTTVGLKAL DLLLNSGKIT LLILDEENDI FLLIFDAMRT FAASDEVQKL
GCKVLHVLFE RVSEEQLTEF VENKDYMILL SALKNFEDEE EIVLHVLHCL HSLAIPCSNV
EVLMSGNVRC YNIVVEAMRA FPIREKIQEV SCCLLHRLTL GNFFNILVLN EVHVFVVKAV
QQYSENAVLQ IAALSCLALL TETIFLNQDL EEKNENQEND DDEEDKLFWL EACYKALTWH
RKNKHVQEAA CWALNNLLMY QNSLHEKIGD EDGQFPAHRE VMLSMLMHSS SKEVFQASAN
ALSTLLEQNV NFRKILLSKG IYLNVLELMQ KHMHSPEVAE SGCKMLNHLF EESSTSLDTM
AAVVPKIITV MKSHETSLSV QLEALRAMLH FIVPGIPEEY REDTEYQHKL NMIEKQCFRN
DIHKLVLGAL NRFIGNPGIQ KCGLKVISSI IHFPDALEVL SLEGAIDSVL HTLQMYPDDQ
EIQCLGLSLI GCLITKKNLC VGTGHLLAKI LISTLQRFKD IGEVQIKGFQ TVLTILELSV
SFSKLLVDYS FDSVIFHQLS SSIMEQKDQQ FLNLCCKCFA KLAVDNELKS VMLEKACDQN
NSIMVECLLL LGADANRAKE ATPLICQVCE KASSPKLVEL LLNSGSREQD VRKALTISIG
KGNSQIISLL LRRLALDLAN SSICLGGFCM GKIDPSWLGP LFPDKTSYLR KETNIGSTLA
RMVLRYQMKS SVEEGAGSGS SGNFSEEIVD KFDEWTFIPE SYVDSVFGQS DDLDSEEIGS
EGSFLVKKKS NSISVGEFYR DPALQRCSPN LQRHSSSLGP IFDHEDLIKR KRKIFSSDDS
LKGASKFQSH MKHSESMSSL PSEREYITSL DLSANELRDV DALSQNSCIS GHLEHLEKLE
LHQNALTSFP QQLCETLKCL THLDLHSNKF TSFPTYLLKM NCIASLDVSR NDIGPSVVLD
PAVKCPTLKQ FNLSYNQISS LPENIGDVVE KLEQLILEGN KISEICSPLS LKELKILNLS
KNHISSLSED FLETCPKLEI LSAKMNFLAA MPFLPSSITS LKLSQNRFTC VPEAILHLPH
LRSLDMSNND IRYLPGPVHW RSLNLRELLF SHNQISILDL SEKACAWSRI EKLHLSHNKL
KEIPPEIGCL ENLTSLDVSY NLDLRSFPNE MGKLSKIWDL PLDELHLNFD FKHVGCKAKD
IIRFLQQRLK KAVPYNRMKL MIVGNTGSGK TTLLQQLMKI KKSDLGMQGA TVGIDVKDWP
IQIRGKGKKD LILNVWDFAG REEFYSTHPH FMTQRALYLA VYDLSKGQAE VDAMKPWLFN
IKARASSSPV ILVGTHLDVT DEKQRKACIS KITKELLNKR GFPAIRDYHF VNATEESDAL
AKLRKTIINE SLNFKIRDQP VVGQLIPDCY VELEKIILSE RKNVPIEFPV IDRKRLLQLV
REHQLQLDEN ELPHAVHFLN ESGVLLHFQD PALQLSDLYF VEPKWLCKVM AQILTVKVEG
FPKHPKGIIS RRDVEKFLSK KKRFPKNYMA QYFKLLEKFQ IALPIGEEYL LVPSSLSDHR
PVIELPHCEN SEIIIRLYEM PYFPMGFWSR LINRLLEISP YMLSGRERAL RPNRMYWRQG
IYLNWSPEAY CLVGSEVLDH HPESFLKITV PSCRKDYIGC ILLGQVVDHI DSLMEEWFPG
LLEIDICGEG ETLLKKWALY SFNDGEEHQK ILLDNLMKKA EEGDLLVNPD QPRLTIPISQ
IAPDLILADL PRNIMLNNDE LEFEQAPEFL LGDGSFGSVY RAAYQGEEVA VKIFNKHTSL
RLLRQELVVL CHLHHPSLIS LLAAGIRPRM LVMELASKGS LDRLLQQDKT SLTRTLQHRI
VLHVADGLRY LHSAMIIYRD LKPHNVLLFT LYPNAAIIAK IADYGIAQYC CRMGIKTSEG
TPGFRAPEVA RGNVIYNQQA DVYSFGLLLY DILTTGGRIA EGLKFPNEFD ELAIQGKLPD
PVKEYGCAPW PMVEKLIKKC LKENPQERPT SAQVFDILNS AELICLMRRI SIPKSFTVEC
MVATNHNSKN VRIWLGCGHT DKGQLSFLDL NTERYTSEEV TDSRILCLAL VYLPVEKESW
IVSGTQSGML LVINTEDGRK RHTLEKMTDS VTCLYCNSFS KQSKQKNFLL VGTADGNLAI
FEDKTVKAKC KGASPLKILN IGNVSTPLMC LSESVNLTEK NIMWGGCGTK VFSFSDDFTI
QKLIETRTNQ RFSYASFCDS NIIAVVVDTA LYVAKKNSPF VEVWDKKTEK LCELIDCVHF
LKEELVRVSK ELKHKMSYSG RVKTLCLQKN TALWIGTGGG HILLLDLSTR RIIRIIHNFC
DSVRVMMIAQ LGSLKNVMLV LGYNRKSAEG TQHQKEIQSC LSVWDVNLPH EVQNLEKHIE
VRKELAEKMR RISVE


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