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MYB transcription factor (Myb domain protein 94) (Putative transcription factor MYB94)

 Q9SN78_ARATH            Unreviewed;       333 AA.
Q9SN78;
01-MAY-2000, integrated into UniProtKB/TrEMBL.
01-MAY-2000, sequence version 1.
22-NOV-2017, entry version 145.
SubName: Full=MYB transcription factor {ECO:0000313|EMBL:AAS10065.1};
SubName: Full=Myb domain protein 94 {ECO:0000313|EMBL:AEE78306.1};
SubName: Full=Putative transcription factor MYB94 {ECO:0000313|EMBL:CAB61986.1};
Name=F1P2.150 {ECO:0000313|EMBL:CAB61986.1};
Synonyms=ATMYB94 {ECO:0000313|EMBL:AEE78306.1},
ATMYBCP70 {ECO:0000313|EMBL:AEE78306.1},
myb domain protein 94 {ECO:0000313|EMBL:AEE78306.1},
MYB94 {ECO:0000313|EMBL:AEE78306.1};
OrderedLocusNames=At3g47600 {ECO:0000313|Araport:AT3G47600,
ECO:0000313|EMBL:AEE78306.1};
Arabidopsis thaliana (Mouse-ear cress).
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae;
Arabidopsis.
NCBI_TaxID=3702 {ECO:0000313|EMBL:CAB61986.1};
[1] {ECO:0000313|EMBL:CAB61986.1}
NUCLEOTIDE SEQUENCE.
Choisne N., Robert C., Brottier P., Wincker P., Cattolico L.,
Artiguenave F., Saurin W., Weissenbach J., Mewes H.W., Lemcke K.,
Mayer K.F.X., Quetier F., Salanoubat M.;
Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases.
[2] {ECO:0000313|EMBL:CAB61986.1}
NUCLEOTIDE SEQUENCE.
EU Arabidopsis sequencing project;
Submitted (NOV-1999) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|EMBL:AEE78306.1, ECO:0000313|Proteomes:UP000006548}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
PubMed=11130713; DOI=10.1038/35048706;
European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research;
Kazusa DNA Research Institute;
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M.,
Fartmann B., Valle G., Blocker H., Perez-Alonso M., Obermaier B.,
Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P.,
De Simone V., Choisne N., Artiguenave F., Robert C., Brottier P.,
Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F.,
Schafer M., Muller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E.,
Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H.,
Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M.,
Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K.,
Kauer G., Lohnert T.H., Nordsiek G., Reichelt J., Scharfe M.,
Schon O., Bargues M., Terol J., Climent J., Navarro P., Collado C.,
Perez-Perez A., Ottenwalder B., Duchemin D., Cooke R., Laudie M.,
Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C.,
Alcaraz J.P., Cottet A., Casacuberta E., Monfort A., Argiriou A.,
flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H.,
Rudd S., Zaccaria P., Mewes H.W., Mayer K.F., Kaul S., Town C.D.,
Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A.,
Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R.,
Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P.,
Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T.,
Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T.,
Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M.,
Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N.,
Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M.,
Tabata S.;
"Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana.";
Nature 408:820-822(2000).
[4] {ECO:0000313|EMBL:AAO22626.1}
NUCLEOTIDE SEQUENCE.
Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M.,
Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C.,
Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y.,
Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M.,
Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P.,
Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R.,
Theologis A.;
"Arabidopsis Full Length cDNA Clones.";
Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
[5] {ECO:0000313|EMBL:AAO42355.1}
NUCLEOTIDE SEQUENCE.
Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M.,
Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C.,
Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y.,
Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M.,
Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P.,
Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R.,
Theologis A.;
"Arabidopsis Full Length cDNA Clones.";
Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases.
[6] {ECO:0000313|EMBL:AAS10065.1}
NUCLEOTIDE SEQUENCE.
Qu L., Gu H.;
"The MYB Transcription Factor Family in Arabidopsis: A Genome-Wide
Cloning and Expression Pattern Analysis.";
Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases.
[7] {ECO:0000313|EMBL:AEE78306.1}
NUCLEOTIDE SEQUENCE.
TAIR;
Swarbreck D., Lamesch P., Wilks C., Huala E.;
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
[8] {ECO:0000313|EMBL:AEE78306.1, ECO:0000313|Proteomes:UP000006548}
GENOME REANNOTATION.
STRAIN=cv. Columbia {ECO:0000313|Proteomes:UP000006548};
Lavstsen T., Jespersen J.S.;
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
-!- INTERACTION:
Q9LXY8:T5P19_170; NbExp=3; IntAct=EBI-4429731, EBI-15200578;
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EMBL; BT002802; AAO22626.1; -; mRNA.
EMBL; BT004361; AAO42355.1; -; mRNA.
EMBL; AY519595; AAS10065.1; -; mRNA.
EMBL; CP002686; AEE78306.1; -; Genomic_DNA.
EMBL; AL132955; CAB61986.1; -; Genomic_DNA.
PIR; T45720; T45720.
RefSeq; NP_190344.1; NM_114628.4.
UniGene; At.21591; -.
STRING; 3702.AT3G47600.1; -.
EnsemblPlants; AT3G47600.1; AT3G47600.1; AT3G47600.
GeneID; 823914; -.
Gramene; AT3G47600.1; AT3G47600.1; AT3G47600.
Araport; AT3G47600; -.
TAIR; locus:2079182; AT3G47600.
eggNOG; KOG0048; Eukaryota.
eggNOG; COG5147; LUCA.
OMA; CDSTINN; -.
OrthoDB; EOG09360KVW; -.
Proteomes; UP000006548; Chromosome 3.
GO; GO:0005634; C:nucleus; IBA:GO_Central.
GO; GO:0000981; F:RNA polymerase II transcription factor activity, sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0043565; F:sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0001135; F:transcription factor activity, RNA polymerase II transcription factor recruiting; IBA:GO_Central.
GO; GO:0003700; F:transcription factor activity, sequence-specific DNA binding; ISS:TAIR.
GO; GO:0044212; F:transcription regulatory region DNA binding; IBA:GO_Central.
GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
GO; GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IBA:GO_Central.
GO; GO:0006355; P:regulation of transcription, DNA-templated; TAS:TAIR.
GO; GO:0009737; P:response to abscisic acid; IEP:TAIR.
GO; GO:0009733; P:response to auxin; IEP:TAIR.
GO; GO:0046686; P:response to cadmium ion; IEP:TAIR.
GO; GO:0009723; P:response to ethylene; IEP:TAIR.
GO; GO:0009753; P:response to jasmonic acid; IEP:TAIR.
GO; GO:0080167; P:response to karrikin; IEP:TAIR.
GO; GO:0009751; P:response to salicylic acid; IEP:TAIR.
GO; GO:0009651; P:response to salt stress; IEP:TAIR.
CDD; cd00167; SANT; 2.
InterPro; IPR009057; Homeobox-like_sf.
InterPro; IPR017930; Myb_dom.
InterPro; IPR001005; SANT/Myb.
Pfam; PF00249; Myb_DNA-binding; 2.
SMART; SM00717; SANT; 2.
SUPFAM; SSF46689; SSF46689; 1.
PROSITE; PS51294; HTH_MYB; 2.
1: Evidence at protein level;
Complete proteome {ECO:0000313|Proteomes:UP000006548};
Reference proteome {ECO:0000313|Proteomes:UP000006548}.
DOMAIN 9 65 HTH myb-type.
{ECO:0000259|PROSITE:PS51294}.
DOMAIN 66 116 HTH myb-type.
{ECO:0000259|PROSITE:PS51294}.
SEQUENCE 333 AA; 37144 MW; FD31160F0F0D3B92 CRC64;
MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTHTGLRRCS KSCRLRWTNY
LRPGIKRGNF TEHEEKMILH LQALLGNRWA AIASYLPERT DNDIKNYWNT HLKKKLKKMN
DSCDSTINNG LDNKDFSISN KNTTSHQSSN SSKGQWERRL QTDINMAKQA LCDALSIDKP
QNPTNFSIPD LGYGPSSSSS STTTTTTTTR NTNPYPSGVY ASSAENIARL LQNFMKDTPK
TSVPLPVAAT EMAITTAASS PSTTEGDGEG IDHSLFSFNS IDEAEEKPKL IDHDINGLIT
QGSLSLFEKW LFDEQSHDMI INNMSLEGQE VLF


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