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Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)

 A7LKV3_9ALPC            Unreviewed;       226 AA.
A7LKV3;
11-SEP-2007, integrated into UniProtKB/TrEMBL.
11-SEP-2007, sequence version 1.
05-DEC-2018, entry version 97.
RecName: Full=Membrane protein {ECO:0000256|RuleBase:RU363118, ECO:0000256|SAAS:SAAS00391116};
Short=M protein {ECO:0000256|RuleBase:RU363118};
AltName: Full=E1 glycoprotein {ECO:0000256|RuleBase:RU363118};
AltName: Full=Matrix glycoprotein {ECO:0000256|RuleBase:RU363118};
AltName: Full=Membrane glycoprotein {ECO:0000256|RuleBase:RU363118};
Name=M {ECO:0000256|RuleBase:RU363118, ECO:0000313|EMBL:ACA81417.1};
ORFNames=CZ761_011 {ECO:0000313|EMBL:SNT95668.1},
CZ761_078 {ECO:0000313|EMBL:SNT95680.1},
CZ761_178 {ECO:0000313|EMBL:SNT95662.1},
CZ761_184 {ECO:0000313|EMBL:SNT95674.1},
CZ761_40 {ECO:0000313|EMBL:SNT95656.1},
PEDVgp5 {ECO:0000313|EMBL:APD70937.1};
Porcine epidemic diarrhea virus.
Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage;
Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus.
NCBI_TaxID=28295 {ECO:0000313|EMBL:ABS72126.1};
[1] {ECO:0000313|EMBL:ABS72126.1}
NUCLEOTIDE SEQUENCE.
STRAIN=DX {ECO:0000313|EMBL:ABS72126.1};
Li J.-Q., Liu J.-X., Lan X.;
"Cloning and characterization and analysis of spike protein gene of
porcine coronavirus.";
Chin. J. Agric. Biotechnol. 0:0-0(2007).
[2] {ECO:0000313|EMBL:ACA81417.1}
NUCLEOTIDE SEQUENCE.
Nuansrichay B., Bubpan P., Parchariyanon S., Chaisingha A.,
Pinyochon W., Sirivan P., Punyahotra R., Rattanapumma R., Molee L.,
Udomphan S., Srisuvan T., Thonghem J., Kvorasei S.;
"Cloning and sequence analysis of the membrane (M) gene of Porcine
epidemic diarrhea virus isolated in Thailand.";
Submitted (MAR-2008) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|EMBL:ACN23187.1}
NUCLEOTIDE SEQUENCE.
STRAIN=KU03CB08 {ECO:0000313|EMBL:ACN23187.1},
KU04RB08 {ECO:0000313|EMBL:ACN23188.1},
KU05CB08 {ECO:0000313|EMBL:ACN23189.1},
KU06RB08 {ECO:0000313|EMBL:ACN23190.1}, and
KU07RB08 {ECO:0000313|EMBL:ACN23191.1};
PubMed=19624933; DOI=10.3201/eid1507.081256;
Puranaveja S., Poolperm P., Lertwatcharasarakul P.,
Kesdaengsakonwut S., Boonsoongnern A., Urairong K., Kitikoon P.,
Choojai P., Kedkovid R., Teankum K., Thanawongnuwech R.;
"Chinese-like strain of porcine epidemic diarrhea virus, Thailand.";
Emerg. Infect. Dis. 15:1112-1115(2009).
[4] {ECO:0000313|EMBL:ACV81762.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BIF256 {ECO:0000313|EMBL:ACV81764.1},
CPF1074 {ECO:0000313|EMBL:ACV81773.1},
CPF193 {ECO:0000313|EMBL:ACV81763.1},
CPF299 {ECO:0000313|EMBL:ACV81767.1},
PFF188 {ECO:0000313|EMBL:ACV81762.1},
PFF285 {ECO:0000313|EMBL:ACV81766.1},
PFF381 {ECO:0000313|EMBL:ACV81768.1},
PFF513 {ECO:0000313|EMBL:ACV81769.1}, and
PFF514 {ECO:0000313|EMBL:ACV81770.1};
Park S.-J., Moon H.-J., Kim H.-K., Ann S.-K., Keum H.-O., Song D.-S.,
Kang B.-K., Lee C.-S., Park B.-K.;
"Further sequence and phylogenetic analyses of the complete membrane
protein genes of porcine epidemic diarrhea virus isolates in Korea.";
Submitted (FEB-2009) to the EMBL/GenBank/DDBJ databases.
[5] {ECO:0000313|EMBL:ACV81762.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BIF256 {ECO:0000313|EMBL:ACV81764.1},
CPF1074 {ECO:0000313|EMBL:ACV81773.1},
CPF193 {ECO:0000313|EMBL:ACV81763.1},
CPF299 {ECO:0000313|EMBL:ACV81767.1},
PFF188 {ECO:0000313|EMBL:ACV81762.1},
PFF285 {ECO:0000313|EMBL:ACV81766.1},
PFF381 {ECO:0000313|EMBL:ACV81768.1},
PFF513 {ECO:0000313|EMBL:ACV81769.1}, and
PFF514 {ECO:0000313|EMBL:ACV81770.1};
PubMed=21210162; DOI=10.1007/s00705-010-0892-9;
Park S.J., Kim H.K., Song D.S., Moon H.J., Park B.K.;
"Molecular characterization and phylogenetic analysis of porcine
epidemic diarrhea virus (PEDV) field isolates in Korea.";
Arch. Virol. 156:577-585(2011).
[6] {ECO:0000313|EMBL:AEE38482.1}
NUCLEOTIDE SEQUENCE.
STRAIN=HB/HS {ECO:0000313|EMBL:AEE38482.1};
Zuo Y., Fan J., Li J.;
Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases.
[7] {ECO:0000313|EMBL:AER35140.1}
NUCLEOTIDE SEQUENCE.
STRAIN=GDST1 {ECO:0000313|EMBL:AER35140.1},
GDST2 {ECO:0000313|EMBL:AET71228.1},
GDST3 {ECO:0000313|EMBL:AET71229.1},
GDST4 {ECO:0000313|EMBL:AET71230.1},
GDST5 {ECO:0000313|EMBL:AET71231.1},
GDST6 {ECO:0000313|EMBL:AET71232.1},
GDST7 {ECO:0000313|EMBL:AET71233.1},
GDST8 {ECO:0000313|EMBL:AET71234.1},
GDSTY {ECO:0000313|EMBL:AER39403.1},
GDXS1 {ECO:0000313|EMBL:AET71226.1},
GDXS2 {ECO:0000313|EMBL:AER39404.1},
GDXS5 {ECO:0000313|EMBL:AER39406.1},
GDYA {ECO:0000313|EMBL:AER39410.1},
GDYG {ECO:0000313|EMBL:AER39419.1}, and
SWK6 {ECO:0000313|EMBL:AER39425.1};
Li Z.;
Submitted (JUN-2011) to the EMBL/GenBank/DDBJ databases.
[8] {ECO:0000313|EMBL:AFF60686.1}
NUCLEOTIDE SEQUENCE.
STRAIN=SH1 {ECO:0000313|EMBL:AFF60686.1},
SH2 {ECO:0000313|EMBL:AFF60687.1}, SH3 {ECO:0000313|EMBL:AFF60688.1},
and SH4 {ECO:0000313|EMBL:AFF60689.1};
Ge F., Yang D., Ju H., Zhou J., Wang J., Liu J., Liu P.;
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AFB77237.1, ECO:0000313|Proteomes:UP000123112}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CH/FJND-3/2011 {ECO:0000313|EMBL:AFB77237.1};
PubMed=22354946; DOI=10.1128/JVI.07150-11;
Chen J., Liu X., Shi D., Shi H., Zhang X., Feng L.;
"Complete genome sequence of a porcine epidemic diarrhea virus
variant.";
J. Virol. 86:3408-3408(2012).
[10] {ECO:0000313|EMBL:AFP36392.1, ECO:0000313|Proteomes:UP000117465}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=GD-B {ECO:0000313|EMBL:AFP36392.1};
PubMed=22879620; DOI=10.1128/JVI.01455-12;
Luo Y., Zhang J., Deng X., Ye Y., Liao M., Fan H.;
"Complete genome sequence of a highly prevalent isolate of porcine
epidemic diarrhea virus in South china.";
J. Virol. 86:9551-9551(2012).
[11] {ECO:0000313|EMBL:AEE38482.1}
NUCLEOTIDE SEQUENCE.
STRAIN=HB/HS {ECO:0000313|EMBL:AEE38482.1};
PubMed=22585338; DOI=10.1007/s11262-012-0755-4;
Fan J.H., Zuo Y.Z., Li J.H., Pei L.H.;
"Heterogeneity in membrane protein genes of porcine epidemic diarrhea
viruses isolated in China.";
Virus Genes 45:113-117(2012).
[12] {ECO:0000313|EMBL:AER39403.1}
NUCLEOTIDE SEQUENCE.
STRAIN=GDSTY {ECO:0000313|EMBL:AER39403.1},
GDXS1 {ECO:0000313|EMBL:AET71226.1},
GDXS2 {ECO:0000313|EMBL:AER39404.1},
GDXS5 {ECO:0000313|EMBL:AER39406.1},
GDYA {ECO:0000313|EMBL:AER39410.1},
GDYG {ECO:0000313|EMBL:AER39419.1},
JS2/2011 {ECO:0000313|EMBL:AFD98088.1}, and
SWK6 {ECO:0000313|EMBL:AER39425.1};
PubMed=22528639; DOI=10.1007/s11262-012-0735-8;
Li Z.L., Zhu L., Ma J.Y., Zhou Q.F., Song Y.H., Sun B.L., Chen R.A.,
Xie Q.M., Bee Y.Z.;
"Molecular characterization and phylogenetic analysis of porcine
epidemic diarrhea virus (PEDV) field strains in south China.";
Virus Genes 45:181-185(2012).
[13] {ECO:0000313|EMBL:AFD98088.1}
NUCLEOTIDE SEQUENCE.
STRAIN=JS2/2011 {ECO:0000313|EMBL:AFD98088.1};
Li Z.;
Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
[14] {ECO:0000313|EMBL:AFK08618.1}
NUCLEOTIDE SEQUENCE.
STRAIN=FJ/NP/2011 {ECO:0000313|EMBL:AFK08618.1};
Wang L.B., Zhou L.J.;
"Molecular characterization and phylogenetic analysis of membrane
protein genes of porcine epidemic diarrhea virus isolates in China.";
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
[15] {ECO:0000313|EMBL:AFP36392.1}
NUCLEOTIDE SEQUENCE.
STRAIN=GD-B {ECO:0000313|EMBL:AFP36392.1};
Wang X.C., Cao H.L., Hao X.Y., Yang Y.J., Yue C.;
Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
[16] {ECO:0000313|EMBL:AFQ37429.1}
NUCLEOTIDE SEQUENCE.
STRAIN=HBMC2012 {ECO:0000313|EMBL:AFQ37429.1};
Song Q., Zhao D.;
Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases.
[17] {ECO:0000313|EMBL:AFU35757.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BJ-2011-3 {ECO:0000313|EMBL:AFU35757.1},
BJ-2012-1 {ECO:0000313|EMBL:AFU35758.1},
BJ-2012-2 {ECO:0000313|EMBL:AFU35759.1},
HB-2012-1 {ECO:0000313|EMBL:AFU35764.1}, and
HB-2012-2 {ECO:0000313|EMBL:AFU35765.1};
Gao Y.Y., Ge X.N., Guo X., Yang H.C.;
Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
[18] {ECO:0000313|EMBL:AGK89917.1, ECO:0000313|Proteomes:UP000096014}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CH/FJZZ-9/2012 {ECO:0000313|EMBL:AGK89917.1};
Chen F., Wang X., Wan S., Li W., Wu Q., He Q.;
"Complete genome sequence of a highly virulent Porcine epidemic
diarrhea virus in South China.";
Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
[19] {ECO:0000313|EMBL:AFZ85188.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/TJ-2012 {ECO:0000313|EMBL:AFZ85188.1};
Wang P., Shan J.J., Zhou S.H., Meng F.W.;
"Molecular characterization of porcine epidemic diarrhea virus (PEDV)
field isolates prevailing in China.";
Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
[20] {ECO:0000313|EMBL:AFZ85189.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/TJ-2012-01 {ECO:0000313|EMBL:AFZ85189.1};
Nishi O., Iiyama K., Yasunaga-Aoki C., Shimizu S.;
"The phylogenetic status and pathogenicity of a new isolate of
Metarhizium sp. from a fruit beetle larvae in Japan.";
Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
[21] {ECO:0000313|EMBL:AGG55740.1, ECO:0000313|Proteomes:UP000117314}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=AH2012 {ECO:0000313|EMBL:AGG55740.1};
Liu H.F., Guo R.L., Ni Y.X., Yu Z.Y., Li B., He K.W.;
Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
[22] {ECO:0000313|EMBL:AGG55753.1, ECO:0000313|Proteomes:UP000171879}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=JS-HZ2012 {ECO:0000313|EMBL:AGG55753.1};
Liu H.F., He K.W., Guo R.L., Ni Y.X., Li B., Yu Z.Y.;
Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
[23] {ECO:0000313|EMBL:AFU35757.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BJ-2011-3 {ECO:0000313|EMBL:AFU35757.1},
BJ-2012-1 {ECO:0000313|EMBL:AFU35758.1},
BJ-2012-2 {ECO:0000313|EMBL:AFU35759.1},
HB-2012-1 {ECO:0000313|EMBL:AFU35764.1}, and
HB-2012-2 {ECO:0000313|EMBL:AFU35765.1};
PubMed=23151819; DOI=10.1007/s00705-012-1541-2;
Gao Y., Kou Q., Ge X., Zhou L., Guo X., Yang H.;
"Phylogenetic analysis of porcine epidemic diarrhea virus field
strains prevailing recently in China.";
Arch. Virol. 158:711-715(2013).
[24] {ECO:0000313|EMBL:AFF60686.1}
NUCLEOTIDE SEQUENCE.
STRAIN=SH1 {ECO:0000313|EMBL:AFF60686.1},
SH2 {ECO:0000313|EMBL:AFF60687.1}, SH3 {ECO:0000313|EMBL:AFF60688.1},
and SH4 {ECO:0000313|EMBL:AFF60689.1};
PubMed=23685898; DOI=10.1007/s00705-013-1722-7;
Ge F.F., Yang D.Q., Ju H.B., Wang J., Liu J., Liu P.H., Zhou J.P.;
"Epidemiological survey of porcine epidemic diarrhea virus in swine
farms in Shanghai, China.";
Arch. Virol. 158:2227-2231(2013).
[25] {ECO:0000313|EMBL:AGO58927.1, ECO:0000313|Proteomes:UP000109462}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=USA/Colorado/2013 {ECO:0000313|EMBL:AGO58927.1};
PubMed=23929470;
Marthaler D., Jiang Y., Otterson T., Goyal S., Rossow K., Collins J.;
"Complete Genome Sequence of Porcine Epidemic Diarrhea Virus Strain
USA/Colorado/2013 from the United States.";
Genome Announc. 1:e00555-13(2013).
[26] {ECO:0000313|EMBL:AHA38163.1, ECO:0000313|Proteomes:UP000103230}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=USA/Iowa/18984/2013 {ECO:0000313|EMBL:AHA38163.1};
PubMed=24356830;
Hoang H., Killian M.L., Madson D.M., Arruda P.H., Sun D.,
Schwartz K.J., Yoon K.J.;
"Full-Length Genome Sequence of a Plaque-Cloned Virulent Porcine
Epidemic Diarrhea Virus Isolate (USA/Iowa/18984/2013) from a
Midwestern U.S. Swine Herd.";
Genome Announc. 1:e01049-13(2013).
[27] {ECO:0000313|EMBL:AHC03505.1, ECO:0000313|Proteomes:UP000114423, ECO:0000313|Proteomes:UP000153092}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=USA/Indiana/17846/2013 {ECO:0000313|EMBL:AHC03511.1}, and
USA/Iowa/16465/2013 {ECO:0000313|EMBL:AHC03505.1};
PubMed=23963154; DOI=10.1177/1040638713501675;
Stevenson G.W., Hoang H., Schwartz K.J., Burrough E.R., Sun D.,
Madson D., Cooper V.L., Pillatzki A., Gauger P., Schmitt B.J.,
Koster L.G., Killian M.L., Yoon K.J.;
"Emergence of Porcine epidemic diarrhea virus in the United States:
clinical signs, lesions, and viral genomic sequences.";
J. Vet. Diagn. Invest. 25:649-654(2013).
[28] {ECO:0000313|Proteomes:UP000110779, ECO:0000313|Proteomes:UP000140002, ECO:0000313|Proteomes:UP000154811}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=IA1 {ECO:0000313|EMBL:AGY31031.1},
IA2 {ECO:0000313|EMBL:AGY31037.1}, and
MN {ECO:0000313|EMBL:AGY31025.1};
PubMed=24129257; DOI=10.1128/mBio.00737-13;
Huang Y.W., Dickerman A.W., Pineyro P., Li L., Fang L., Kiehne R.,
Opriessnig T., Meng X.J.;
"Origin, evolution, and genotyping of emergent porcine epidemic
diarrhea virus strains in the United States.";
MBio 4:e00737-e00713(2013).
[29] {ECO:0000313|EMBL:AFV59250.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/XC/12 {ECO:0000313|EMBL:AFV59250.1};
Zheng F.M., Huo J.Y., Zhao J., Chang H.T., Wang X.M., Chen L.,
Wang C.Q.;
"Molecular Characterization and Phylogenetic Analysis of Porcine
Epidemic Diarrhea Virus Field Strains in Central China during 2010-
2012 Outbreaks.";
Ping Tu Hsueh Pao 29:197-205(2013).
[30] {ECO:0000313|EMBL:AEW24874.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/HBXX2/11 {ECO:0000313|EMBL:AEW24874.1},
CH/HBXX3/11 {ECO:0000313|EMBL:AFJ80124.1}, and
CH/ZKXH/11 {ECO:0000313|EMBL:AEW24885.1};
PubMed=23269482; DOI=10.1007/s11262-012-0867-x;
Yang X., Huo J.Y., Chen L., Zheng F.M., Chang H.T., Zhao J.,
Wang X.W., Wang C.Q.;
"Genetic variation analysis of reemerging porcine epidemic diarrhea
virus prevailing in central China from 2010 to 2011.";
Virus Genes 46:337-344(2013).
[31] {ECO:0000313|EMBL:AGV05242.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH1 {ECO:0000313|EMBL:AGV05242.1},
CH13 {ECO:0000313|EMBL:AGV05251.1},
CH17 {ECO:0000313|EMBL:AGV05252.1},
CH18 {ECO:0000313|EMBL:AGV05253.1},
CH22 {ECO:0000313|EMBL:AGV05254.1}, CH7 {ECO:0000313|EMBL:AGV05248.1},
and CH8 {ECO:0000313|EMBL:AGV05249.1};
Li W., Li H., He Q.;
"Sequence analysis of the M gene of porcine epidemic diarrhea viruses
isolated from China.";
Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases.
[32] {ECO:0000313|EMBL:AGS12452.1, ECO:0000313|Proteomes:UP000104329}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=13-019349 {ECO:0000313|EMBL:AGS12452.1};
Killian M.L., Koster L., Jenkins-Moore M., Lomkin R., Swenson S.;
Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases.
[33] {ECO:0000313|EMBL:AGY31025.1}
NUCLEOTIDE SEQUENCE.
STRAIN=IA1 {ECO:0000313|EMBL:AGY31031.1},
IA2 {ECO:0000313|EMBL:AGY31037.1}, and
MN {ECO:0000313|EMBL:AGY31025.1};
Huang Y., Meng X.J.;
Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases.
[34] {ECO:0000313|EMBL:AHG99157.1}
NUCLEOTIDE SEQUENCE.
STRAIN=MF3809/2008/South Korea {ECO:0000313|EMBL:AHG99157.1};
Park S.-J., Song D.-S., Park B.-K.;
"Emergence of porcine epidemic diarrhea virus variant with large
genomic deletion in South Korea.";
Submitted (OCT-2013) to the EMBL/GenBank/DDBJ databases.
[35] {ECO:0000313|EMBL:AIE15953.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/HuBWHYQ/2012 {ECO:0000313|EMBL:AIE16008.1},
CH/JXJDZ-1/2012 {ECO:0000313|EMBL:AIE16028.1},
CH/JXJDZ-F/2012 {ECO:0000313|EMBL:AIE15978.1},
CH/JXZS-1223L {ECO:0000313|EMBL:AIE15993.1},
CH/JXZS-3L {ECO:0000313|EMBL:AIE15989.1},
CH/SDZD-1/2012 {ECO:0000313|EMBL:AIE15998.1},
CH/SDZD-2/2012 {ECO:0000313|EMBL:AIE16003.1},
CH/ZJHZHY-6/2013 {ECO:0000313|EMBL:AIE15973.1},
CH/ZJJS-1Z/2012 {ECO:0000313|EMBL:AIE15953.1},
CH/ZJJS-2Z/2012 {ECO:0000313|EMBL:AIE15983.1},
CH/ZJJS-4X/2012 {ECO:0000313|EMBL:AIE16033.1},
CH/ZJQZ-2/2012 {ECO:0000313|EMBL:AIE16013.1}, and
CH/ZJQZ-2w/2012 {ECO:0000313|EMBL:AIE16038.1};
Tian P., Zhang G., Jin Y., Xing G., Qv l., Zhou J.;
Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
[36] {ECO:0000313|EMBL:AIE15938.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/ZJCX-1/2012 {ECO:0000313|EMBL:AIE15938.1};
Tian P., Zhang G., Jin Y., Xing G., Qv L., Zhou J.;
Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
[37] {ECO:0000313|EMBL:AHA38163.1}
NUCLEOTIDE SEQUENCE.
STRAIN=USA/Iowa/18984/2013 {ECO:0000313|EMBL:AHA38163.1};
Hoang H.T., Killian M.L., Madson D.M., Arruda P.H.E., Sun D.,
Schwartz K.J., Yoon K.;
Submitted (NOV-2013) to the EMBL/GenBank/DDBJ databases.
[38] {ECO:0000313|EMBL:AHK25060.1}
NUCLEOTIDE SEQUENCE.
STRAIN=AHBB/2012 {ECO:0000313|EMBL:AHK25061.1},
AHFD/2013 {ECO:0000313|EMBL:AHK25074.1},
AHFR/2012 {ECO:0000313|EMBL:AHK25060.1},
AHFY/2012 {ECO:0000313|EMBL:AHK25063.1},
AHLA/2012 {ECO:0000313|EMBL:AHK25066.1},
AHLX/2012 {ECO:0000313|EMBL:AHK25067.1},
AHLX/2013 {ECO:0000313|EMBL:AHK25077.1},
AHMAS/2013 {ECO:0000313|EMBL:AHK25078.1},
AHSX/2012 {ECO:0000313|EMBL:AHK25068.1}, and
AHSZ/2012 {ECO:0000313|EMBL:AHK25069.1};
Gu C.;
"Molecular characteristics of M protein genes of porcine epidemic
diarrhea virus.";
Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
[39] {ECO:0000313|EMBL:AKR05181.1, ECO:0000313|Proteomes:UP000107079}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=PC21A {ECO:0000313|EMBL:AKR05181.1};
PubMed=24795932; DOI=10.3201/eid2004.131685;
Jung K., Wang Q., Scheuer K.A., Lu Z., Zhang Y., Saif L.J.;
"Pathology of US porcine epidemic diarrhea virus strain PC21A in
gnotobiotic pigs.";
Emerg. Infect. Dis. 20:662-665(2014).
[40] {ECO:0000313|EMBL:AHL38187.1, ECO:0000313|Proteomes:UP000107011, ECO:0000313|Proteomes:UP000115913}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=OH1414 {ECO:0000313|EMBL:AHN60055.1}, and
OH851 {ECO:0000313|EMBL:AHL38187.1};
PubMed=24750580; DOI=10.3201/eid2005.140195;
Wang L., Byrum B., Zhang Y.;
"New variant of porcine epidemic diarrhea virus, United States,
2014.";
Emerg. Infect. Dis. 20:917-919(2014).
[41] {ECO:0000313|EMBL:AID66724.1, ECO:0000313|Proteomes:UP000162314}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=KNU-1305 {ECO:0000313|EMBL:AID66724.1};
PubMed=24960370; DOI=10.3201/eid2007.140294;
Lee S., Lee C.;
"Outbreak-Related Porcine Epidemic Diarrhea Virus Strains Similar to
US Strains, South Korea, 2013.";
Emerg. Infect. Dis. 20:1223-1226(2014).
[42] {ECO:0000313|Proteomes:UP000096231, ECO:0000313|Proteomes:UP000096695, ECO:0000313|Proteomes:UP000097739}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=MEX/104/2013 {ECO:0000313|EMBL:AID57108.1},
MEX/124/2014 {ECO:0000313|EMBL:AID57060.1},
USA/Colorado30/2013 {ECO:0000313|EMBL:AID56688.1},
USA/Colorado47/2013 {ECO:0000313|EMBL:AID56766.1},
USA/Illinois63/2013 {ECO:0000313|EMBL:AID56814.1},
USA/Illinois81/2013 {ECO:0000313|EMBL:AID56910.1},
USA/Illinois87/2013 {ECO:0000313|EMBL:AID56940.1},
USA/Illinois97/2013 {ECO:0000313|EMBL:AID56994.1},
USA/Illinois98/2013 {ECO:0000313|EMBL:AID57000.1},
USA/Indiana12.83/2013 {ECO:0000313|EMBL:AID56670.1},
USA/Indiana34/2013 {ECO:0000313|EMBL:AID56706.1},
USA/Iowa103/2013 {ECO:0000313|EMBL:AID57024.1},
USA/Iowa106/2013 {ECO:0000313|EMBL:AID57030.1},
USA/Iowa107/2013 {ECO:0000313|EMBL:AID57036.1},
USA/Iowa23.57/2013 {ECO:0000313|EMBL:AID56754.1},
USA/Iowa28/2013 {ECO:0000313|EMBL:AID56676.1},
USA/Iowa70/2013 {ECO:0000313|EMBL:AID56856.1},
USA/Iowa96/2013 {ECO:0000313|EMBL:AID56988.1},
USA/Kansas125/2014 {ECO:0000313|EMBL:AID57066.1},
USA/Kansas29/2013 {ECO:0000313|EMBL:AID56682.1},
USA/Kansas36/2013 {ECO:0000313|EMBL:AID56718.1},
USA/Kansas46/2013 {ECO:0000313|EMBL:AID56760.1},
USA/Minnesota100/2013 {ECO:0000313|EMBL:AID57006.1},
USA/Minnesota127/2014 {ECO:0000313|EMBL:AID57078.1},
USA/Minnesota41/2013 {ECO:0000313|EMBL:AID56742.1},
USA/Minnesota42/2013 {ECO:0000313|EMBL:AID56748.1},
USA/Minnesota52/2013 {ECO:0000313|EMBL:AID57084.1},
USA/Minnesota54/2013 {ECO:0000313|EMBL:AID56772.1},
USA/Minnesota58/2013 {ECO:0000313|EMBL:AID56790.1},
USA/Minnesota59/2013 {ECO:0000313|EMBL:AID56796.1},
USA/Minnesota61/2013 {ECO:0000313|EMBL:AID57090.1},
USA/Minnesota62/2013 {ECO:0000313|EMBL:AID56808.1},
USA/Minnesota64/2013 {ECO:0000313|EMBL:AID56820.1},
USA/Minnesota65/2013 {ECO:0000313|EMBL:AID56826.1},
USA/Minnesota67/2013 {ECO:0000313|EMBL:AID56838.1},
USA/Minnesota71/2013 {ECO:0000313|EMBL:AID57096.1},
USA/Minnesota72/2013 {ECO:0000313|EMBL:AID56862.1},
USA/Minnesota73/2013 {ECO:0000313|EMBL:AID56868.1},
USA/Minnesota76/2013 {ECO:0000313|EMBL:AID56886.1},
USA/Minnesota77/2013 {ECO:0000313|EMBL:AID56892.1},
USA/Minnesota78/2013 {ECO:0000313|EMBL:AID56898.1},
USA/Minnesota82/2013 {ECO:0000313|EMBL:AID56916.1},
USA/Minnesota83/2013 {ECO:0000313|EMBL:AID56922.1},
USA/Minnesota84/2013 {ECO:0000313|EMBL:AID57102.1},
USA/Minnesota85/2013 {ECO:0000313|EMBL:AID56928.1},
USA/Minnesota86/2013 {ECO:0000313|EMBL:AID56934.1},
USA/Minnesota89/2013 {ECO:0000313|EMBL:AID56946.1},
USA/Minnesota90/2013 {ECO:0000313|EMBL:AID56952.1},
USA/Minnesota94/2013 {ECO:0000313|EMBL:AID56976.1},
USA/Minnesota95/2013 {ECO:0000313|EMBL:AID56982.1},
USA/Missouri101/2013 {ECO:0000313|EMBL:AID57012.1},
USA/Missouri102/2013 {ECO:0000313|EMBL:AID57018.1},
USA/Missouri92/2013 {ECO:0000313|EMBL:AID56964.1},
USA/Missouri93/2013 {ECO:0000313|EMBL:AID56970.1},
USA/NorthCarolina40/2013 {ECO:0000313|EMBL:AID56736.1},
USA/NorthCarolina66/2013 {ECO:0000313|EMBL:AID56832.1},
USA/NorthCarolina91/2013 {ECO:0000313|EMBL:AID56958.1},
USA/Ohio120/2014 {ECO:0000313|EMBL:AID57048.1},
USA/Ohio123/2014 {ECO:0000313|EMBL:AID57054.1},
USA/Ohio126/2014 {ECO:0000313|EMBL:AID57072.1},
USA/Ohio60/2013 {ECO:0000313|EMBL:AID56802.1},
USA/Ohio68/2013 {ECO:0000313|EMBL:AID56844.1},
USA/Ohio69/2013 {ECO:0000313|EMBL:AID56850.1},
USA/Ohio75/2013 {ECO:0000313|EMBL:AID56880.1},
USA/Oklahoma32/2013 {ECO:0000313|EMBL:AID56700.1},
USA/Oklahoma35/2013 {ECO:0000313|EMBL:AID56712.1},
USA/Tennesse56/2013 {ECO:0000313|EMBL:AID56784.1},
USA/Texas128/2013 {ECO:0000313|EMBL:AID57042.1},
USA/Texas31/2013 {ECO:0000313|EMBL:AID56694.1},
USA/Texas39/2013 {ECO:0000313|EMBL:AID56730.1},
USA/Wisconsin55/2013 {ECO:0000313|EMBL:AID56778.1}, and
USA/Wisconsin74/2013 {ECO:0000313|EMBL:AID56874.1};
PubMed=25279722; DOI=10.3201/eid2010.140491;
Vlasova A.N., Marthaler D., Wang Q., Culhane M.R., Rossow K.D.,
Rovira A., Collins J., Saif L.J.;
"Distinct characteristics and complex evolution of PEDV strains, North
America, May 2013-February 2014.";
Emerg. Infect. Dis. 20:1620-1628(2014).
[43] {ECO:0000313|EMBL:AIE15938.1, ECO:0000313|Proteomes:UP000140886}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/HuBWHYQ/2012 {ECO:0000313|EMBL:AIE16008.1},
CH/JXJDZ-1/2012 {ECO:0000313|EMBL:AIE16028.1},
CH/JXJDZ-F/2012 {ECO:0000313|EMBL:AIE15978.1},
CH/JXZS-1223L {ECO:0000313|EMBL:AIE15993.1},
CH/JXZS-3L {ECO:0000313|EMBL:AIE15989.1},
CH/SDZD-1/2012 {ECO:0000313|EMBL:AIE15998.1},
CH/SDZD-2/2012 {ECO:0000313|EMBL:AIE16003.1},
CH/ZJCX-1/2012 {ECO:0000313|EMBL:AIE15938.1},
CH/ZJHZHY-6/2013 {ECO:0000313|EMBL:AIE15973.1},
CH/ZJJS-1Z/2012 {ECO:0000313|EMBL:AIE15953.1},
CH/ZJJS-2Z/2012 {ECO:0000313|EMBL:AIE15983.1},
CH/ZJJS-4X/2012 {ECO:0000313|EMBL:AIE16033.1},
CH/ZJQZ-2/2012 {ECO:0000313|EMBL:AIE16013.1}, and
CH/ZJQZ-2w/2012 {ECO:0000313|EMBL:AIE16038.1};
PubMed=25272273; DOI=10.3201/eid2010.140338;
Tian P.F., Jin Y.L., Xing G., Qv L.L., Huang Y.W., Zhou J.Y.;
"Evidence of recombinant strains of porcine epidemic diarrhea virus,
United States, 2013.";
Emerg. Infect. Dis. 20:1735-1738(2014).
[44] {ECO:0000313|EMBL:AHM88220.1, ECO:0000313|Proteomes:UP000141838}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CHYJ130330 {ECO:0000313|EMBL:AHM88220.1};
PubMed=24744324;
Jia A., Feng X., Liu Q., Zhou R., Wang G.;
"Complete Genome Sequence of CHYJ130330, a Highly Virulent Strain of
Porcine Epidemic Diarrhea Virus in South China.";
Genome Announc. 2:e00165-14(2014).
[45] {ECO:0000313|EMBL:AHZ94890.1, ECO:0000313|Proteomes:UP000126216}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=NPL-PEDv/2013/P10 {ECO:0000313|EMBL:AHZ94890.1};
PubMed=24926047;
Lawrence P.K., Bumgardner E., Bey R.F., Stine D., Bumgarner R.E.;
"Genome sequences of porcine epidemic diarrhea virus: in vivo and in
vitro phenotypes.";
Genome Announc. 2:e00503-14(2014).
[46] {ECO:0000313|EMBL:AHY04232.1, ECO:0000313|Proteomes:UP000097201}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=K14JB01 {ECO:0000313|EMBL:AHY04232.1};
PubMed=24874682;
Cho Y.Y., Lim S.I., Kim Y.K., Song J.Y., Lee J.B., An D.J.;
"Complete Genome Sequence of K14JB01, a Novel Variant Strain of
Porcine Epidemic Diarrhea Virus in South Korea.";
Genome Announc. 2:e00505-14(2014).
[47] {ECO:0000313|Proteomes:UP000117024, ECO:0000313|Proteomes:UP000121150, ECO:0000313|Proteomes:UP000138117}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=KUIDL-PED-2014-001 {ECO:0000313|EMBL:AHX58685.1},
KUIDL-PED-2014-002 {ECO:0000313|EMBL:AHX58679.1}, and
KUIDL-PED-2014-007 {ECO:0000313|EMBL:AHX58673.1};
PubMed=24954514; DOI=10.1016/j.meegid.2014.06.005;
Choi J.C., Lee K.K., Pi J.H., Park S.Y., Song C.S., Choi I.S.,
Lee J.B., Lee D.H., Lee S.W.;
"Comparative genome analysis and molecular epidemiology of the
reemerging porcine epidemic diarrhea virus strains isolated in
Korea.";
Infect. Genet. Evol. 26:348-351(2014).
[48] {ECO:0000313|Proteomes:UP000133657, ECO:0000313|Proteomes:UP000148048, ECO:0000313|Proteomes:UP000160123}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ISU13-19338E-IN-homogenate {ECO:0000313|EMBL:AHA38121.1},
ISU13-19338E-IN-passage3 {ECO:0000313|EMBL:AHA38128.1},
ISU13-19338E-IN-passage9 {ECO:0000313|EMBL:AHA38135.1},
ISU13-22038-IA-homogenate {ECO:0000313|EMBL:AHA38142.1},
ISU13-22038-IA-passage3 {ECO:0000313|EMBL:AHA38149.1}, and
ISU13-22038-IA-passage9 {ECO:0000313|EMBL:AHA38156.1};
PubMed=24197882;
Chen Q., Li G., Stasko J., Thomas J.T., Stensland W.R.,
Pillatzki A.E., Gauger P.C., Schwartz K.J., Madson D., Yoon K.J.,
Stevenson G.W., Burrough E.R., Harmon K.M., Main R.G., Zhang J.;
"Isolation and Characterization of Porcine Epidemic Diarrhea Viruses
Associated with the 2013 Disease Outbreak among Swine in the United
States.";
J. Clin. Microbiol. 52:234-243(2014).
[49] {ECO:0000313|EMBL:AIP84470.1, ECO:0000313|Proteomes:UP000174684}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ON-018 {ECO:0000313|EMBL:AIP84470.1};
PubMed=25098383; DOI=10.1111/tbed.12269;
Pasick J., Berhane Y., Ojkic D., Maxie G., Embury-Hyatt C., Swekla K.,
Handel K., Fairles J., Alexandersen S.;
"Investigation into the role of potentially contaminated feed as a
source of the first-detected outbreaks of porcine epidemic diarrhea in
Canada.";
Transbound. Emerg. Dis. 61:397-410(2014).
[50] {ECO:0000313|Proteomes:UP000098326, ECO:0000313|Proteomes:UP000099939, ECO:0000313|Proteomes:UP000102377}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=PC177 {ECO:0000313|EMBL:AKR05187.1},
TC Iowa106 {ECO:0000313|EMBL:AIN52139.1},
TC PC168-P2 {ECO:0000313|EMBL:AIN52103.1},
TC PC170-P2 {ECO:0000313|EMBL:AIN52109.1},
TC PC177-P2 {ECO:0000313|EMBL:AIN52121.1},
TC PC180-P2 {ECO:0000313|EMBL:AIN52127.1},
TC PC182-P2 {ECO:0000313|EMBL:AIN52133.1},
TC PC22A-P10 {ECO:0000313|EMBL:AIN52091.1}, and
TC-PC173-P2 {ECO:0000313|EMBL:AIN52115.1};
PubMed=25217400; DOI=10.1016/j.vetmic.2014.08.012;
Oka T., Saif L.J., Marthaler D., Esseili M.A., Meulia T., Lin C.M.,
Vlasova A.N., Jung K., Zhang Y., Wang Q.;
"Cell culture isolation and sequence analysis of genetically diverse
US porcine epidemic diarrhea virus strains including a novel strain
with a large deletion in the spike gene.";
Vet. Microbiol. 173:258-269(2014).
[51] {ECO:0000313|EMBL:AIM47751.1, ECO:0000313|Proteomes:UP000141930}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=USA/KS/2013 {ECO:0000313|EMBL:AIM47751.1};
Shang P., Guo R., Poulsen E., Ransburgh R., Li Y., Zhu L., Bai J.,
Hesse R., Rowland R.R.R., Fang Y.;
"Antibody response to Porcine epidemic diarrhea virus (PEDV)
nonstructural proteins and implications in disease diagnosis.";
Submitted (JAN-2014) to the EMBL/GenBank/DDBJ databases.
[52] {ECO:0000313|EMBL:AJD07379.1}
NUCLEOTIDE SEQUENCE.
STRAIN=JXJA1301 {ECO:0000313|EMBL:AJD07380.1},
JXJJ1301 {ECO:0000313|EMBL:AJD07381.1},
JXNC1301 {ECO:0000313|EMBL:AJD07382.1},
JXSR1301 {ECO:0000313|EMBL:AJD07379.1}, and
JXYC1301 {ECO:0000313|EMBL:AJD07385.1};
Song D., Chen Y., Huang D., Zhang T., Peng Q., Huang T., Nie X.,
Tang Y., Hua X.;
"Cloning and Sequence Analysis of the E and M gene of Porcine Epidemic
Diarrhea Virus Field Strains in Central China during 2013 Outbreaks.";
Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
[53] {ECO:0000313|EMBL:AIC83852.1}
NUCLEOTIDE SEQUENCE.
STRAIN=NJ {ECO:0000313|EMBL:AIC83852.1};
Li Y., Shi W., Jiang Y.;
"Sequence and phylogenetic analysis of the structural genes of porcine
epidemic diarrhea virus isolate NJ in China.";
Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
[54] {ECO:0000313|EMBL:AHY04232.1}
NUCLEOTIDE SEQUENCE.
STRAIN=K14JB01 {ECO:0000313|EMBL:AHY04232.1};
Cho Y., Lim S., Kim Y., Song J., Lee J., An D.;
Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
[55] {ECO:0000313|EMBL:AHX58673.1}
NUCLEOTIDE SEQUENCE.
STRAIN=KUIDL-PED-2014-001 {ECO:0000313|EMBL:AHX58685.1},
KUIDL-PED-2014-002 {ECO:0000313|EMBL:AHX58679.1}, and
KUIDL-PED-2014-007 {ECO:0000313|EMBL:AHX58673.1};
Choi J.;
Submitted (MAR-2014) to the EMBL/GenBank/DDBJ databases.
[56] {ECO:0000313|EMBL:AIC82407.1}
NUCLEOTIDE SEQUENCE.
STRAIN=FJ-LY1 2012 {ECO:0000313|EMBL:AIC82407.1}, and
FJ-YX 2013 {ECO:0000313|EMBL:AIC82415.1};
Lin Y.S., Wang L.B., Zhou L.J., Wang C.Y.;
"The investigation of molecular epidemiology of porcine epidemic
diarrhea virus in Fujian province in 2012-2014.";
Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
[57] {ECO:0000313|EMBL:AJD09511.1}
NUCLEOTIDE SEQUENCE.
STRAIN=KDCN12KH {ECO:0000313|EMBL:AJD09514.1},
KDGG10YO {ECO:0000313|EMBL:AJD09511.1},
KDGN13_295BG {ECO:0000313|EMBL:AJD09524.1},
KDJN10NJ {ECO:0000313|EMBL:AJD09512.1},
KDJN12GAM {ECO:0000313|EMBL:AJD09516.1}, and
KDJN12JU {ECO:0000313|EMBL:AJD09517.1};
Kim S.-H., Lee K.-K.;
"Genetic evolution and biological analysis of porcine epidemic
diarrhea virus in Korean Pigs from 1998 to 2013.";
Submitted (MAY-2014) to the EMBL/GenBank/DDBJ databases.
[58] {ECO:0000313|EMBL:AIJ01338.1, ECO:0000313|Proteomes:UP000096940}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=LZW {ECO:0000313|EMBL:AIJ01338.1};
Zhou H., Yang B., Xu F., Wei L., Wang J., Li Y., Zhu S., Su X.,
Wang J., Liu J.;
"Porcine epidemic diarrhea virus isolate.";
Submitted (MAY-2014) to the EMBL/GenBank/DDBJ databases.
[59] {ECO:0000313|EMBL:AIK28711.1, ECO:0000313|Proteomes:UP000135367}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=PEDV/USA/Minnesota188/2014 {ECO:0000313|EMBL:AIK28711.1};
Marthaler D., Rossow K., Bruner L.;
"A third porcine epidemic diarrhea virus has been identified in the
United States, which has a 6-nucleotide deletion in the spike gene.";
Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
[60] {ECO:0000313|EMBL:AIK69678.1, ECO:0000313|Proteomes:UP000154143}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=NPL-PEDv/2013/p10.1 {ECO:0000313|EMBL:AIK69678.1};
Collin E.A.;
"An inactivated vaccine made from a U.S. field isolate of porcine
epidemic disease virus is immunogenic in pigs.";
Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
[61] {ECO:0000313|EMBL:AIT56242.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/HeN/2012 {ECO:0000313|EMBL:AIT56242.1},
CH/HeN/AY-2012-2 {ECO:0000313|EMBL:AIT56246.1},
CH/HeN/FQ-2014 {ECO:0000313|EMBL:AIT56250.1}, and
CH/HeN/ZMD-2012 {ECO:0000313|EMBL:AIT56247.1};
Zhou B.Q., Wu Z.M., Yan R.Q., Zhao X.L.;
"Genetic Variation Analysis of M and ORF3 Genes of Porcine epidemic
diarrhea virus Isolated Henan.";
Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
[62] {ECO:0000313|EMBL:AIT56254.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/HeN/JZ-2013 {ECO:0000313|EMBL:AIT56255.1}, and
CH/HeN/RZ-2013 {ECO:0000313|EMBL:AIT56254.1};
Zhou B.Q., Wu Z.M., Yan R.Q., Zhao X.L., Chen H.J.;
"Genetic Variation Analysis of M and ORF3 Genes of Porcine Epidemic
Diarrhea Virus Isolated Henan.";
Submitted (JUN-2014) to the EMBL/GenBank/DDBJ databases.
[63] {ECO:0000313|EMBL:AIR95868.1, ECO:0000313|Proteomes:UP000109281}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=KNU-1406-1 {ECO:0000313|EMBL:AIR95868.1};
Lee S., Lee C.;
"Novel Variant of Porcine Epidemic Diarrhea Virus, South Korea,
2014.";
Submitted (AUG-2014) to the EMBL/GenBank/DDBJ databases.
[64] {ECO:0000313|EMBL:AKP80613.1}
NUCLEOTIDE SEQUENCE.
STRAIN=USA/IA/2013/19321 {ECO:0000313|EMBL:AKP80613.1},
USA/IA/2013/20849 {ECO:0000313|EMBL:AKP80620.1},
USA/IL/2013/59573-5 {ECO:0000313|EMBL:AKP80627.1}, and
USA/MO/2014/03293 {ECO:0000313|EMBL:AKP80634.1};
Chen Q., Chriswell A., Dunn D., Li G., Sinha A., Harmon K.,
Stensland W., Gauger P., Yoon K.-J., Madson D., Schwartz K.,
Mueller K., Main R., Stevenson G., Zhang J.;
"Molecular epidemiology of porcine epidemic diarrhea virus in U.S.
swine from April 2013 to August 2014.";
Submitted (OCT-2014) to the EMBL/GenBank/DDBJ databases.
[65] {ECO:0000313|EMBL:AKA88562.1}
NUCLEOTIDE SEQUENCE.
STRAIN=USA/Utah 29625/2014 {ECO:0000313|EMBL:AKA88562.1};
Killian M.L., Koster L.G., Jenkins-Moore M.M., Swenson S.L.;
Submitted (NOV-2014) to the EMBL/GenBank/DDBJ databases.
[66] {ECO:0000313|EMBL:AHF20048.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/JX-1/2013 {ECO:0000313|EMBL:AHF20048.1};
Song D.P., Huang D.Y., Zeng L., Huang T., Zhang T.S., Peng Q.,
Nie X.W., Chen Y.J., Tang Y.X.;
Submitted (DEC-2014) to the EMBL/GenBank/DDBJ databases.
[67] {ECO:0000313|EMBL:CDW77216.1, ECO:0000313|Proteomes:UP000155002}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=GER/L00719/2014 {ECO:0000313|EMBL:CDW77216.1};
Hanke D., Jenckel M., Petrov A., Ritzmann M., Stadler J., Akimkin V.,
Blome S., Pohlmann A., Schirrmeier H., Beer M., Hoeper D.;
"Comparison of Porcine Epidemic Diarrhea Viruses from Germany and the
United States, 2014 .";
Emerg. Infect. Dis. 21:0-0(2015).
[68] {ECO:0000313|EMBL:AKE47381.1, ECO:0000313|Proteomes:UP000100204}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=FR/001/2014 {ECO:0000313|EMBL:AKE47381.1};
PubMed=26044419;
Grasland B., Bigault L., Bernard C., Quenault H., Toulouse O.,
Fablet C., Rose N., Touzain F., Blanchard Y.;
"Complete genome sequence of a porcine epidemic diarrhea s gene indel
strain isolated in france in december 2014.";
Genome Announc. 3:e00535-15(2015).
[69] {ECO:0000313|EMBL:AKC34875.1, ECO:0000313|Proteomes:UP000166734}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=15V010/BEL/2015 {ECO:0000313|EMBL:AKC34875.1};
PubMed=25999551;
Theuns S., Conceicao-Neto N., Christiaens I., Zeller M.,
Desmarets L.M., Roukaerts I.D., Acar D.D., Heylen E.,
Matthijnssens J., Nauwynck H.J.;
"Complete genome sequence of a porcine epidemic diarrhea virus from a
novel outbreak in belgium, january 2015.";
Genome Announc. 3:0-0(2015).
[70] {ECO:0000313|Proteomes:UP000099262, ECO:0000313|Proteomes:UP000104629, ECO:0000313|Proteomes:UP000107825}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=AOM-1/JPN/2014 {ECO:0000313|EMBL:BAT33116.1},
AOM-2/JPN/2014 {ECO:0000313|EMBL:BAT33278.1},
AOM-3/JPN/2014 {ECO:0000313|EMBL:BAT33254.1},
EHM-1/JPN/2014 {ECO:0000313|EMBL:BAT33128.1},
FKO-1/JPN/2014 {ECO:0000313|EMBL:BAT33122.1},
GNM-1/JPN/2014 {ECO:0000313|EMBL:BAT33194.1},
GNM-2/JPN/2014 {ECO:0000313|EMBL:BAT33230.1},
HRS-1/JPN/2014 {ECO:0000313|EMBL:BAT33206.1},
IBR-3/JPN/2014 {ECO:0000313|EMBL:BAT33302.1},
IBR-4/JPN/2014 {ECO:0000313|EMBL:BAT33308.1},
IBR-5/JPN/2014 {ECO:0000313|EMBL:BAT33170.1},
IBR-6/JPN/2014 {ECO:0000313|EMBL:BAT33242.1},
IBR-7/JPN/2014 {ECO:0000313|EMBL:BAT33248.1},
IBR-8/JPN/2014 {ECO:0000313|EMBL:BAT33314.1},
IWT-1/JPN/2014 {ECO:0000313|EMBL:BAT33260.1},
IWT-2/JPN/2014 {ECO:0000313|EMBL:BAT33290.1},
IWT-3/JPN/2014 {ECO:0000313|EMBL:BAT33266.1},
IWT-4/JPN/2014 {ECO:0000313|EMBL:BAT33134.1},
KCH-1/JPN/2014 {ECO:0000313|EMBL:BAT33320.1},
KCH-2/JPN/2014 {ECO:0000313|EMBL:BAT33326.1},
KGS-1/JPN/2013 {ECO:0000313|EMBL:BAT33140.1},
KGS-2/JPN/2013 {ECO:0000313|EMBL:BAT33146.1},
KGS-4/JPN/2014 {ECO:0000313|EMBL:BAT33212.1},
KGW-1/JPN/2014 {ECO:0000313|EMBL:BAT33200.1},
KMM-1/JPN/2014 {ECO:0000313|EMBL:BAT33158.1},
KMM-2/JPN/2014 {ECO:0000313|EMBL:BAT33164.1},
MIE-1/JPN/2014 {ECO:0000313|EMBL:BAT33218.1},
MYG-1/JPN/2014 {ECO:0000313|EMBL:BAT33284.1},
MYZ-1/JPN/2013 {ECO:0000313|EMBL:BAT33332.1},
NIG-1/JPN/2014 {ECO:0000313|EMBL:BAT33236.1},
NIG-2/JPN/2014 {ECO:0000313|EMBL:BAT33296.1},
OKN-1/JPN/2013 {ECO:0000313|EMBL:BAT33272.1},
OKN-2/JPN/2014 {ECO:0000313|EMBL:BAT33152.1},
OKY-1/JPN/2014 {ECO:0000313|EMBL:BAT33338.1},
TTR-1/JPN/2014 {ECO:0000313|EMBL:BAT33188.1}, and
TTR-2/JPN/2014 {ECO:0000313|EMBL:BAT33224.1};
PubMed=26477934; DOI=10.1016/j.meegid.2015.10.017;
Suzuki T., Murakami S., Takahashi O., Kodera A., Masuda T., Itoh S.,
Miyazaki A., Ohashi S., Tsutsui T.;
"Molecular characterization of pig epidemic diarrhoea viruses isolated
in Japan from 2013 to 2014.";
Infect. Genet. Evol. 36:363-368(2015).
[71] {ECO:0000313|Proteomes:UP000119870, ECO:0000313|Proteomes:UP000122204, ECO:0000313|Proteomes:UP000130338}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=PEDV-10F {ECO:0000313|EMBL:AJP67417.1},
PEDV-14 {ECO:0000313|EMBL:AJP67423.1},
PEDV-1C {ECO:0000313|EMBL:AJP67399.1},
PEDV-8C {ECO:0000313|EMBL:AJP67411.1},
PEDV-CHZ {ECO:0000313|EMBL:AJP67435.1},
PEDV-LS {ECO:0000313|EMBL:AJP67447.1},
PEDV-LY {ECO:0000313|EMBL:AJP67441.1},
PEDV-LYG {ECO:0000313|EMBL:AJP67453.1}, and
PEDV-WS {ECO:0000313|EMBL:AJP67459.1};
PubMed=25694517;
Sun M., Ma J., Wang Y., Wang M., Song W., Zhang W., Lu C., Yao H.;
"Genomic and epidemiological characteristics provide new insights into
the phylogeographical and spatiotemporal spread of porcine epidemic
diarrhea virus in Asia.";
J. Clin. Microbiol. 53:1484-1492(2015).
[72] {ECO:0000313|EMBL:AHF20048.1, ECO:0000313|Proteomes:UP000117616, ECO:0000313|Proteomes:UP000135702}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CH/JX-1/2013 {ECO:0000313|EMBL:AHF20048.1}, and
CH/JX-2/2013 {ECO:0000313|EMBL:AJD07369.1};
PubMed=25790462;
Song D., Huang D., Peng Q., Huang T., Chen Y., Zhang T., Nie X.,
He H., Wang P., Liu Q., Tang Y.;
"Molecular characterization and phylogenetic analysis of porcine
epidemic diarrhea viruses associated with outbreaks of severe diarrhea
in piglets in jiangxi, china 2013.";
PLoS ONE 10:E0120310-E0120310(2015).
[73] {ECO:0000313|Proteomes:UP000131950, ECO:0000313|Proteomes:UP000132225, ECO:0000313|Proteomes:UP000142467}
NUCLEOTIDE SEQUENCE.
STRAIN=KNU-141112-feces {ECO:0000313|EMBL:AKS50225.1},
KNU-141112-P10 {ECO:0000313|EMBL:AKS50247.1},
KNU-141112-P20 {ECO:0000313|EMBL:AKS50252.1},
KNU-141112-P3 {ECO:0000313|EMBL:AKS50235.1},
KNU-141112-P30 {ECO:0000313|EMBL:AKS50257.1},
KNU-141112-P4 {ECO:0000313|EMBL:AKS50230.1}, and
KNU-141112-P5 {ECO:0000313|EMBL:AKS50241.1};
PubMed=26196056; DOI=10.1016/j.virusres.2015.07.010;
Lee S., Kim Y., Lee C.;
"Isolation and characterization of a Korean porcine epidemic diarrhea
virus strain KNU-141112.";
Virus Res. 208:215-224(2015).
[74] {ECO:0000313|Proteomes:UP000109730, ECO:0000313|Proteomes:UP000109960, ECO:0000313|Proteomes:UP000113720}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=YN15 {ECO:0000313|EMBL:ALM09367.1},
YN30 {ECO:0000313|EMBL:ALM09373.1},
YN60 {ECO:0000313|EMBL:ALM09379.1}, and
YN90 {ECO:0000313|EMBL:ALM09385.1};
PubMed=26512689; DOI=10.3390/v7102891;
Chen F., Zhu Y., Wu M., Ku X., Ye S., Li Z., Guo X., He Q.;
"Comparative Genomic Analysis of Classical and Variant Virulent
Parental/Attenuated Strains of Porcine Epidemic Diarrhea Virus.";
Viruses 7:5525-5538(2015).
[75] {ECO:0000313|EMBL:BAR92901.1, ECO:0000313|Proteomes:UP000158257}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Tottori2/JPN/2014 {ECO:0000313|EMBL:BAR92901.1};
Suzuki T., Masuda T., Ashiba T., Murakami S., Takahashi O.,
Miyazaki A., Ohashi S., Yamasato H.;
"New S gene variant of porcine epidemic virus, Japan, 2014.";
Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
[76] {ECO:0000313|Proteomes:UP000103873, ECO:0000313|Proteomes:UP000114579, ECO:0000313|Proteomes:UP000143145}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=OH10123-14 {ECO:0000313|EMBL:ALM31935.1},
OH8593-14 {ECO:0000313|EMBL:ALM31941.1}, and
OH9097-14 {ECO:0000313|EMBL:ALM31947.1};
Xiang T., Song Y., Huang L., Wang B., Wu P.;
Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
[77] {ECO:0000313|EMBL:AKO63240.1, ECO:0000313|Proteomes:UP000096896}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Hawaii/39249/2014 {ECO:0000313|EMBL:AKO63240.1};
Koster L.G., Killian M.L.;
Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
[78] {ECO:0000313|Proteomes:UP000096250, ECO:0000313|Proteomes:UP000096781, ECO:0000313|Proteomes:UP000100263}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CAN/Quebec334/2014 {ECO:0000313|EMBL:AKJ22136.1},
MEX/Mexico329/2014 {ECO:0000313|EMBL:AKJ21746.1},
USA/Colorado203/2014 {ECO:0000313|EMBL:AKJ22088.1},
USA/Colorado420/2014 {ECO:0000313|EMBL:AKJ22022.1},
USA/Hawaii/2014 {ECO:0000313|EMBL:AKJ21716.1},
USA/Illinois176/2014 {ECO:0000313|EMBL:AKJ21728.1},
USA/Illinois194/2014 {ECO:0000313|EMBL:AKJ22040.1},
USA/Illinois197/2014 {ECO:0000313|EMBL:AKJ21764.1},
USA/Illinois201/2014 {ECO:0000313|EMBL:AKJ21920.1},
USA/Illinois255/2014 {ECO:0000313|EMBL:AKJ21770.1},
USA/Illinois256/2014 {ECO:0000313|EMBL:AKJ22052.1},
USA/Illinois258/2014 {ECO:0000313|EMBL:AKJ22106.1},
USA/Illinois259/2014 {ECO:0000313|EMBL:AKJ21860.1},
USA/Illinois260/2014 {ECO:0000313|EMBL:AKJ21962.1},
USA/Illinois261/2014 {ECO:0000313|EMBL:AKJ21866.1},
USA/Illinois262/2014 {ECO:0000313|EMBL:AKJ21926.1},
USA/Illinois307/2014 {ECO:0000313|EMBL:AKJ21884.1},
USA/Illinois308/2014 {ECO:0000313|EMBL:AKJ21842.1},
USA/Illinois333/2014 {ECO:0000313|EMBL:AKJ21974.1},
USA/Indiana195/2014 {ECO:0000313|EMBL:AKJ21950.1},
USA/Indiana254/2014 {ECO:0000313|EMBL:AKJ21956.1},
USA/Iowa161/2014 {ECO:0000313|EMBL:AKJ21980.1},
USA/Iowa162/2014 {ECO:0000313|EMBL:AKJ21998.1},
USA/Iowa303/2014 {ECO:0000313|EMBL:AKJ22112.1},
USA/Kansas166/2014 {ECO:0000313|EMBL:AKJ22034.1},
USA/Kansas275/2014 {ECO:0000313|EMBL:AKJ21812.1},
USA/Kansas280/2014 {ECO:0000313|EMBL:AKJ21932.1},
USA/Kansas431/2014 {ECO:0000313|EMBL:AKJ22064.1},
USA/Kansas432/2014 {ECO:0000313|EMBL:AKJ21752.1},
USA/Kentucky248/2014 {ECO:0000313|EMBL:AKJ21782.1},
USA/Kentucky291/2014 {ECO:0000313|EMBL:AKJ21896.1},
USA/Michigan189/2014 {ECO:0000313|EMBL:AKJ21992.1},
USA/Michigan252/2014 {ECO:0000313|EMBL:AKJ22082.1},
USA/Minnesota159/2014 {ECO:0000313|EMBL:AKJ21944.1},
USA/Minnesota163/2014 {ECO:0000313|EMBL:AKJ21734.1},
USA/Minnesota179/2014 {ECO:0000313|EMBL:AKJ21758.1},
USA/Minnesota187/2014 {ECO:0000313|EMBL:AKJ21704.1},
USA/Minnesota200/2014 {ECO:0000313|EMBL:AKJ22100.1},
USA/Minnesota202/2014 {ECO:0000313|EMBL:AKJ22046.1},
USA/Minnesota211/2014 {ECO:0000313|EMBL:AKJ21710.1},
USA/Minnesota212/2014 {ECO:0000313|EMBL:AKJ21908.1},
USA/Minnesota236/2014 {ECO:0000313|EMBL:AKJ21914.1},
USA/Minnesota250/2014 {ECO:0000313|EMBL:AKJ21806.1},
USA/Minnesota269/2014 {ECO:0000313|EMBL:AKJ21848.1},
USA/Minnesota271/2014 {ECO:0000313|EMBL:AKJ22028.1},
USA/Minnesota276/2014 {ECO:0000313|EMBL:AKJ21818.1},
USA/Minnesota281/2014 {ECO:0000313|EMBL:AKJ21788.1},
USA/Minnesota289/2014 {ECO:0000313|EMBL:AKJ21938.1},
USA/Minnesota290/2014 {ECO:0000313|EMBL:AKJ22058.1},
USA/Minnesota306/2014 {ECO:0000313|EMBL:AKJ21878.1},
USA/Minnesota309/2014 {ECO:0000313|EMBL:AKJ22124.1},
USA/Minnesota312/2014 {ECO:0000313|EMBL:AKJ21986.1},
USA/Minnesota338/2014 {ECO:0000313|EMBL:AKJ21800.1},
USA/Minnesota372/2014 {ECO:0000313|EMBL:AKJ22196.1},
USA/Minnesota379/2014 {ECO:0000313|EMBL:AKJ22142.1},
USA/Minnesota402/2014 {ECO:0000313|EMBL:AKJ21776.1},
USA/Minnesota408/2014 {ECO:0000313|EMBL:AKJ22184.1},
USA/Minnesota409/2014 {ECO:0000313|EMBL:AKJ22190.1},
USA/Missouri164/2014 {ECO:0000313|EMBL:AKJ22076.1},
USA/Missouri177/2014 {ECO:0000313|EMBL:AKJ21824.1},
USA/Missouri270/2014 {ECO:0000313|EMBL:AKJ22214.1},
USA/Missouri373/2014 {ECO:0000313|EMBL:AKJ22202.1},
USA/Nebraska266/2014 {ECO:0000313|EMBL:AKJ22004.1},
USA/Nebraska287/2014 {ECO:0000313|EMBL:AKJ21740.1},
USA/Nebraska288/2014 {ECO:0000313|EMBL:AKJ21968.1},
USA/Nebraska348/2014 {ECO:0000313|EMBL:AKJ21854.1},
USA/Ohio249/2014 {ECO:0000313|EMBL:AKJ22178.1},
USA/Ohio295/2014 {ECO:0000313|EMBL:AKJ21836.1},
USA/Ohio300/2014 {ECO:0000313|EMBL:AKJ22130.1},
USA/Ohio343/2014 {ECO:0000313|EMBL:AKJ21830.1},
USA/Oklahoma1/2015 {ECO:0000313|EMBL:AKJ21722.1},
USA/Oklahoma320/2014 {ECO:0000313|EMBL:AKJ22010.1},
USA/Oklahoma418/2014 {ECO:0000313|EMBL:AKJ21902.1},
USA/Oklahoma477/2014 {ECO:0000313|EMBL:AKJ22148.1},
USA/SouthDakota285/2014 {ECO:0000313|EMBL:AKJ21872.1},
USA/SouthDakota336/2014 {ECO:0000313|EMBL:AKJ22016.1},
USA/SouthDakota371/2014 {ECO:0000313|EMBL:AKJ21794.1},
USA/Texas424/2014 {ECO:0000313|EMBL:AKJ21890.1}, and
USA/Texas435/2014 {ECO:0000313|EMBL:AKJ22154.1};
Jarvis M.C., Lam H.C., Zhang Y., Wang L., Hesse R.A., Hause B.M.,
Vlasova A., Wang Q., Zhang J., Nelson M.I., Murtaugh M., Marthaler D.;
"Genomic and phylogenetic relationships between American and global
strains of porcine epidemic diarrhea virus.";
Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
[79] {ECO:0000313|EMBL:AMS37103.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/GDZH02/1401 {ECO:0000313|EMBL:AMS37103.1}, and
CH/GDZHDM/1401 {ECO:0000313|EMBL:AMS37108.1};
Mo W.Y., Luo J., Zhu S.H., Zhang D.T., Tian Q., Wang Y.F., Leng H.P.,
Lin Y.Y., Guo X.F.;
"Molecular Characteristics of Porcine Epidemic Diarrhea Virus Isolated
in Southern China from 2013-2014.";
Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
[80] {ECO:0000313|EMBL:AKR05181.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PC21A {ECO:0000313|EMBL:AKR05181.1};
Syromyatnikov M.Y., Popov V.N.;
Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
[81] {ECO:0000313|EMBL:ALP06213.1, ECO:0000313|Proteomes:UP000097091}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CH/HNLH/2015 {ECO:0000313|EMBL:ALP06213.1};
Gao D., Wang C., Chen L., Yang X., Wang X., Chang H., Liu H., Li Y.,
Zhao J.;
"Full-length genome sequence of a virulent Porcine epidemic diarrhea
virus isolate CH/HNAY/2015 passage 1 in vero cells.";
Submitted (JUN-2015) to the EMBL/GenBank/DDBJ databases.
[82] {ECO:0000313|EMBL:AMD11121.1}
NUCLEOTIDE SEQUENCE.
STRAIN=USA/2014/IL/20697 P7 {ECO:0000313|EMBL:AMD11121.1};
Chen Q., Thomas J., Gimenez-Lirola L., Hardham J., Gao Q., Gerber P.,
Opriessnig T., Zheng Y., Li G., Gauger P., Madson D., Magstadt D.,
Zhang J.;
"Evaluation of Serological Cross-reactivity and Cross-neutralization
Between the United States Porcine Epidemic Diarrhea Virus Prototype
and S-INDEL-variant Strains.";
Submitted (AUG-2015) to the EMBL/GenBank/DDBJ databases.
[83] {ECO:0000313|EMBL:BAT31609.1}
NUCLEOTIDE SEQUENCE.
STRAIN=VNUA_PED01 {ECO:0000313|EMBL:BAT31609.1};
Lan N.T., Son N.V., Hoa N.T., Yen N.T.;
"Research on molecular characteristics of PEDV isolated in Vietnam.";
Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
[84] {ECO:0000313|EMBL:ALS35477.1, ECO:0000313|Proteomes:UP000138881}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=LNCT2 {ECO:0000313|EMBL:ALS35477.1};
PubMed=26611909; DOI=10.1007/s00705-015-2694-6;
Wang X., Chen J., Shi D., Shi H., Zhang X., Yuan J., Jiang S.,
Feng L.;
"Immunogenicity and antigenic relationships among spike proteins of
porcine epidemic diarrhea virus subtypes G1 and G2.";
Arch. Virol. 161:537-547(2016).
[85] {ECO:0000313|EMBL:ALR74760.1, ECO:0000313|Proteomes:UP000127765}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=HUA-14PED96 {ECO:0000313|EMBL:ALR74760.1};
PubMed=26893409;
Choe S.E., Park K.H., Lim S.I., Le V.P., Hien N.B., Thach P.N.,
Phuong le H.T., An B.H., Han S.H., Cho I.S., An D.J.;
"Complete Genome Sequence of a Porcine Epidemic Diarrhea Virus Strain
from Vietnam, HUA-14PED96, with a Large Genomic Deletion.";
Genome Announc. 4:e00002-16(2016).
[86] {ECO:0000313|EMBL:AMC39587.1, ECO:0000313|Proteomes:UP000160238}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=COL/Cundinamarca/2014 {ECO:0000313|EMBL:AMC39587.1};
PubMed=27103712;
Jarvis M.C., Lam H.C., Rovira A., Marthaler D.G.;
"Complete Genome Sequence of Porcine Epidemic Diarrhea Virus Strain
COL/Cundinamarca/2014 from Colombia.";
Genome Announc. 4:e00239-16(2016).
[87] {ECO:0000313|EMBL:ALU34115.1, ECO:0000313|Proteomes:UP000132054}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SLO/JH-11/2015 {ECO:0000313|EMBL:ALU34115.1};
PubMed=27056240;
Toplak I., Ipavec M., Kuhar U., Kusar D., Papic B., Koren S.,
Toplak N.;
"Complete Genome Sequence of the Porcine Epidemic Diarrhea Virus
Strain SLO/JH-11/2015.";
Genome Announc. 4:0-0(2016).
[88] {ECO:0000313|Proteomes:UP000102422, ECO:0000313|Proteomes:UP000132791, ECO:0000313|Proteomes:UP000173775}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
PubMed=26841768; DOI=10.1099/jgv.0.000419;
Chen Q., Gauger P., Stafne M., Thomas J., Madson D., Huang H.,
Zheng Y., Li G., Zhang J.;
"Pathogenesis comparison between the United States porcine epidemic
diarrhoea virus prototype and S-INDEL-variant strains in conventional
neonatal piglets.";
J. Gen. Virol. 97:1107-1121(2016).
[89] {ECO:0000313|EMBL:AKP80592.1}
NUCLEOTIDE SEQUENCE.
STRAIN=USA/IA/2013/49379 {ECO:0000313|EMBL:AKP80599.1},
USA/IL20697/2014 P5 {ECO:0000313|EMBL:AMD11127.1},
USA/NC/2013/35140 {ECO:0000313|EMBL:AKP80592.1}, and
USA/NC/2013/49469 {ECO:0000313|EMBL:AKP80606.1};
Chen Q., Gauger P., Stafne M., Thomas J., Madson D., Huang H.,
Zheng Y., Li G., Zhang J.;
"Pathogenesis comparison between the United States porcine epidemic
diarrhea virus prototype and S-INDEL-variant strains in conventional
neonatal piglets.";
J. Gen. Virol. 0:0-0(2016).
[90] {ECO:0000313|EMBL:ANC68210.1, ECO:0000313|Proteomes:UP000105572}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=YC2014 {ECO:0000313|EMBL:ANC68210.1};
PubMed=27103490; DOI=10.1186/s12985-016-0529-z;
Lin H., Chen L., Gao L., Yuan X., Ma Z., Fan H.;
"Epidemic strain YC2014 of porcine epidemic diarrhea virus could
provide piglets against homologous challenge.";
Virol. J. 13:68-68(2016).
[91] {ECO:0000313|EMBL:AIA61017.1, ECO:0000313|Proteomes:UP000110085}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=OH15962 {ECO:0000313|EMBL:AIA61017.1};
PubMed=27059242; DOI=10.1007/s11262-016-1334-x;
Wang L., Hayes J., Byrum B., Zhang Y.;
"US variant porcine epidemic diarrhea virus: histological lesions and
genetic characterization.";
Virus Genes 52:578-581(2016).
[92] {ECO:0000313|EMBL:AMR59404.1, ECO:0000313|Proteomes:UP000125786}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=CH-SD01 {ECO:0000313|EMBL:AMR59404.1};
Zhang Y.;
"Full-genome sequence analysis of a novel variant strain of Porcine
Epidemic Diarrhea Virus in Northeast China.";
Submitted (JAN-2016) to the EMBL/GenBank/DDBJ databases.
[93] {ECO:0000313|EMBL:AOS89614.1}
NUCLEOTIDE SEQUENCE.
STRAIN=ZL29 {ECO:0000313|EMBL:AOS89614.1};
Qianqian S., Tao S., Han L., Liurong F., Shaobo X.;
"Complete genomic Sequence of a novel PEDV INDEL strain from China in
2015.";
Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
[94] {ECO:0000313|EMBL:AND65696.1}
NUCLEOTIDE SEQUENCE.
STRAIN=GZ-GZ {ECO:0000313|EMBL:AND65709.1},
GZ-KF8 {ECO:0000313|EMBL:AND65697.1},
GZGL {ECO:0000313|EMBL:AND65696.1},
GZGY-01 {ECO:0000313|EMBL:AND65708.1},
GZKY {ECO:0000313|EMBL:AND65700.1},
GZLB {ECO:0000313|EMBL:AND65707.1},
GZMR {ECO:0000313|EMBL:AND65703.1},
GZZAI1 {ECO:0000313|EMBL:AND65702.1}, and
GZZY {ECO:0000313|EMBL:AND65699.1};
Feng X., Wang K., Zhou B., Wang W., Mao L.;
"Establishment of PCR and Epidemiological Investigation of Swine Viral
Diarrhea.";
Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
[95] {ECO:0000313|EMBL:ANI85731.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PEDV/USA/Iowa127/2015 {ECO:0000313|EMBL:ANI85749.1},
PEDV/USA/Kansas126/2015 {ECO:0000313|EMBL:ANI85737.1},
PEDV/USA/Minnesota123/2015 {ECO:0000313|EMBL:ANI85779.1},
PEDV/USA/Minnesota125/2015 {ECO:0000313|EMBL:ANI85815.1},
PEDV/USA/Minnesota129/2015 {ECO:0000313|EMBL:ANI85767.1},
PEDV/USA/Minnesota131/2015 {ECO:0000313|EMBL:ANI85809.1},
PEDV/USA/Minnesota135/2015 {ECO:0000313|EMBL:ANI85773.1},
PEDV/USA/Minnesota4/2015 {ECO:0000313|EMBL:ANI85761.1},
PEDV/USA/Missouri130/2015 {ECO:0000313|EMBL:ANI85785.1},
PEDV/USA/Nebraska108/2015 {ECO:0000313|EMBL:ANI85803.1},
PEDV/USA/NorthDakota93/2015 {ECO:0000313|EMBL:ANI85755.1},
PEDV/USA/Oklahoma133/2015 {ECO:0000313|EMBL:ANI85743.1},
PEDV/USA/Texas128/2015 {ECO:0000313|EMBL:ANI85791.1},
PEDV/USA/Texas132/2015 {ECO:0000313|EMBL:ANI85797.1}, and
PEDV/USA/Texas134/2015 {ECO:0000313|EMBL:ANI85731.1};
NVSL Swine Enteric Coronavirus Disease Surveillance;
Freeman M.;
Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
[96] {ECO:0000313|EMBL:AKR05187.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/SCCD/2014 {ECO:0000313|EMBL:AMR60836.1}, and
PC177 {ECO:0000313|EMBL:AKR05187.1};
Ploux O.;
Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
[97] {ECO:0000313|EMBL:AND76939.1, ECO:0000313|Proteomes:UP000134050}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=SD2014 {ECO:0000313|EMBL:AND76939.1};
Gao X., Li J., Li D., Xu F., Zhao J., Gai X., Guo X., Han J., Zhou L.,
Yang H.;
"Complete Genome Sequence of a Porcine Epidemic Diarrhea Virus from a
Novel Outbreak in Shandong, China, 2015.";
Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
[98] {ECO:0000313|EMBL:ARJ54149.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/GDZHDM/1401 {ECO:0000313|EMBL:ARJ54149.1};
Mo W., Luo J., Mo M., Zhu S., Zhang D., Tian Q., Wang Y., Chen H.,
Lin Y., Leng H., Guo X.;
"Novel insights into field isolates of porcine epidemic diarrhea virus
passaged in vitro and the field.";
Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
[99] {ECO:0000313|EMBL:APD70937.1}
NUCLEOTIDE SEQUENCE.
STRAIN=BJ-2011-C {ECO:0000313|EMBL:APD70937.1};
Evans L.H., Alamgir A., Owens N., Weber N.D., Virtaneva K.,
Barbian K., Babar A., Rosenke K.;
Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
[100] {ECO:0000313|EMBL:ANM27773.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PEDV-FJ-Fuzhou {ECO:0000313|EMBL:ANM27773.1};
Wang Q., Liu M., Xu L., Zhuang Y., Li C.;
"Expression and purification of recombinant PEDV M protein in E. coli
BL21 (DE3).";
Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
[101] {ECO:0000313|EMBL:AQT33897.1}
NUCLEOTIDE SEQUENCE.
STRAIN=ZJ15XS0101 P1 {ECO:0000313|EMBL:AQT33897.1};
Li X., Li G., Liu Y., Guo N., Lv Y., Fang W., Narayan P.;
"Isolation and identification of porcine epidemic diarrhea virus field
strain PEDV ZJ15XS0101 P1.";
Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
[102] {ECO:0000313|EMBL:AQK38171.1}
NUCLEOTIDE SEQUENCE.
STRAIN=KB2013-4 {ECO:0000313|EMBL:AQK38171.1};
Florea S., Webb J.S., Jaromczyk J., Schardl C.L.;
Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
[103] {ECO:0000313|EMBL:ARM65487.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PC22A {ECO:0000313|EMBL:ARM65487.1};
Seilhamer J.J.;
Submitted (AUG-2016) to the EMBL/GenBank/DDBJ databases.
[104] {ECO:0000313|EMBL:ASK39746.1}
NUCLEOTIDE SEQUENCE.
STRAIN=HLJ/DQ-1/16 {ECO:0000313|EMBL:ASK39753.1}, and
HLJ/HEB-1/16 {ECO:0000313|EMBL:ASK39746.1};
Gao G., Zhou Y., Hou X., Cao Y., Wu D., Ren Y.;
"Genetic variation analysis of Porcine epidemic diarrhea virus in
2016, in Heilongjiang province, China.";
Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
[105] {ECO:0000313|EMBL:AQW35016.1}
NUCLEOTIDE SEQUENCE.
STRAIN=XM2-4 {ECO:0000313|EMBL:AQW35016.1};
Chen N., Zhu J.;
"Genomic Characterization of Porcine Epidemic Diarrhea Viruses from
Vaccinated Pig Herds with Severe Diarrhea in Fujian, China 2016.";
Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
[106] {ECO:0000313|EMBL:APH81309.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/HNZZ47/2016 {ECO:0000313|EMBL:APH81309.1};
Liu X., Zhang Q., Fang Y., Zhou P., Wang Y., Zhang Y.;
"Complete genome sequence of a variant Porcine epidemic diarrhea virus
strain isolated in Henan, China.";
Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
[107] {ECO:0000313|EMBL:APG31001.1}
NUCLEOTIDE SEQUENCE.
STRAIN=SLOreBAS-1/2015 {ECO:0000313|EMBL:APG31001.1}, and
SLOreBAS-2/2015 {ECO:0000313|EMBL:APG31008.1};
Toplak I., Kuhar U.;
"Identification of two recombinant strains of porcine epidemic
diarrhea virus from pigs with diarrhea.";
Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
[108] {ECO:0000313|EMBL:ARM53664.1}
NUCLEOTIDE SEQUENCE.
STRAIN=LH2M {ECO:0000313|EMBL:ARM53664.1},
LY1M {ECO:0000313|EMBL:ARM53665.1},
NY10M {ECO:0000313|EMBL:ARM53675.1},
NY3M {ECO:0000313|EMBL:ARM53668.1},
NY4M {ECO:0000313|EMBL:ARM53669.1},
NY5M {ECO:0000313|EMBL:ARM53670.1},
NY6M {ECO:0000313|EMBL:ARM53671.1},
NY7M {ECO:0000313|EMBL:ARM53672.1},
NY8M {ECO:0000313|EMBL:ARM53673.1},
PDS2M {ECO:0000313|EMBL:ARM53677.1},
XC1M {ECO:0000313|EMBL:ARM53678.1},
XY1M {ECO:0000313|EMBL:ARM53681.1},
XY2M {ECO:0000313|EMBL:ARM53682.1},
XY4M {ECO:0000313|EMBL:ARM53684.1},
XY6M {ECO:0000313|EMBL:ARM53686.1},
XY7M {ECO:0000313|EMBL:ARM53687.1},
XY9M {ECO:0000313|EMBL:ARM53689.1},
ZMD11M {ECO:0000313|EMBL:ARM53700.1},
ZMD12M {ECO:0000313|EMBL:ARM53701.1},
ZMD1M {ECO:0000313|EMBL:ARM53690.1},
ZMD1OM {ECO:0000313|EMBL:ARM53699.1},
ZMD2M {ECO:0000313|EMBL:ARM53691.1},
ZMD3M {ECO:0000313|EMBL:ARM53692.1},
ZMD4M {ECO:0000313|EMBL:ARM53693.1},
ZMD7M {ECO:0000313|EMBL:ARM53696.1},
ZMD8M {ECO:0000313|EMBL:ARM53697.1}, and
ZMD9M {ECO:0000313|EMBL:ARM53698.1};
Dong J., Liu T., Qu Z.;
"Cloning and sequence analysis of M gene of Porcine epidemic diarrhea
virus field strains in central China.";
Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
[109] {ECO:0000313|EMBL:AQY61722.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PEDV 1842/2016 ITA {ECO:0000313|EMBL:AQY61722.1};
Pizzurro F., Marcacci M., Orsini M., Cito F., Savini G., Forzan M.,
Zaccaria G., Lorusso A.;
"Porcine Epidemic Diarrhea virus in Abruzzi region, Central Italy.";
Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
[110] {ECO:0000313|EMBL:APR64498.1}
NUCLEOTIDE SEQUENCE.
STRAIN=JSCZ1601 {ECO:0000313|EMBL:APR64498.1};
Jaros S., Januszkiewicz K., Wedrychowicz H.;
Submitted (NOV-2016) to the EMBL/GenBank/DDBJ databases.
[111] {ECO:0000313|EMBL:ASB30084.1}
NUCLEOTIDE SEQUENCE.
STRAIN=HUN/5031/2016 {ECO:0000313|EMBL:ASB30084.1};
PubMed=28605965; DOI=.1556/004.2017.025;
Valko A., Biksi I., Csagola A., Tuboly T., Kiss K., Ursu K., Dan A.;
"Porcine epidemic diarrhoea virus with a recombinant S gene detected
in Hungary, 2016.";
Acta Vet. Hung. 65:253-261(2017).
[112] {ECO:0000313|EMBL:ASA69727.1}
NUCLEOTIDE SEQUENCE.
STRAIN=KNU-1601 {ECO:0000313|EMBL:ASA69727.1};
PubMed=28589511;
Lee S., Lee C.;
"Complete genome sequence of a novel S-insertion variant of porcine
epidemic diarrhea virus from South Korea.";
Arch. Virol. 0:0-0(2017).
[113] {ECO:0000313|EMBL:APX42110.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PC22A-P3 {ECO:0000313|EMBL:APX42110.1}, and
PC22A-P95-13 {ECO:0000313|EMBL:APX42116.1};
Lin C.-M., Hou Y., Marthaler D.G., Gao X., Liu X.L., Zheng L.,
Saif L.J., Wang Q.;
"Attenuation of an original US porcine epidemic diarrhea virus strain
PC22A via serial cell culture passage.";
Vet. Microbiol. 201:62-71(2017).
[114] {ECO:0000313|EMBL:ARM65493.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PC22A {ECO:0000313|EMBL:ARM65499.1}, and
TC-PC177 {ECO:0000313|EMBL:ARM65493.1};
Hou Y., Lin C.-M., Yokoyama M., Yount B.L., Marthaler D.,
Douglas A.L., Ghimire S., Qing Y., Baric R.S., Saif L.J., Wang Q.;
"Deletion of a 197 amino acid-region in the N-terminal domain of spike
protein attenuates porcine epidemic diarrhea virus in piglet.";
Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases.
[115] {ECO:0000313|EMBL:ATJ03685.1}
NUCLEOTIDE SEQUENCE.
STRAIN=13-JM127 {ECO:0000313|EMBL:ATJ03686.1},
13-JM128 {ECO:0000313|EMBL:ATJ03687.1},
14JM-01 {ECO:0000313|EMBL:ATJ03685.1},
14JM-144 {ECO:0000313|EMBL:ATJ03688.1},
14JM-208 {ECO:0000313|EMBL:ATJ03689.1},
14JM-216 {ECO:0000313|EMBL:ATJ03690.1},
16JM-334 {ECO:0000313|EMBL:ATJ03693.1}, and
16JM-339 {ECO:0000313|EMBL:ATJ03694.1};
Peterson S.W.;
Submitted (FEB-2017) to the EMBL/GenBank/DDBJ databases.
[116] {ECO:0000313|EMBL:ASA40094.1}
NUCLEOTIDE SEQUENCE.
STRAIN=KNU-141112-S DEL2 {ECO:0000313|EMBL:ASA40094.1},
KNU-141112-S DEL2/ORF3 {ECO:0000313|EMBL:ASA40100.1},
KNU-141112-S DEL5 {ECO:0000313|EMBL:ASA40106.1}, and
KNU-141112-S DEL5/ORF3 {ECO:0000313|EMBL:ASA40112.1};
Lee S., Son K.-Y., Noh Y.-H., Lee S.-C., Choi H.-W., Yoon I.-J.,
Lee C.;
"Genetic characteristics, pathogenicity and immunogenicity associated
with cell adaptation of a virulent genotype 2b porcine epidemic
diarrhea virus.";
Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
[117] {ECO:0000313|EMBL:ARQ03272.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/GX/2015/750A {ECO:0000313|EMBL:ARQ03272.1};
Afonso C.L., Miller P.J., Scott M.A., Spackman E., Goraichik I.,
Dimitrov K.M., Suarez D.L., Swayne D.E.;
Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
[118] {ECO:0000313|EMBL:ARM65487.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PC22A {ECO:0000313|EMBL:ARM65487.1};
Hou Y., Lin C.-M., Yokoyama M., Yount B.L., Marthaler D.,
Douglas A.L., Ghimire S., Qing Y., Baric R.S., Saif L.J., Wang Q.;
"Deletion of a 197 amino acid-region in the N-terminal domain of spike
protein attenuates porcine epidemic diarrhea virus in piglet.";
Submitted (MAY-2017) to the EMBL/GenBank/DDBJ databases.
[119] {ECO:0000313|EMBL:AUJ79487.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CH/JXJA/2017 {ECO:0000313|EMBL:AUJ79487.1};
Kai L., Ping S.D., Yu Y., Fan Z.F., Ming Z., Nan G.N., Jun H.H.,
Yan H.D., Xin T.Y.;
"Isolation and characterization of porcine epidemic diarrhea virus
associated with porcine diarrhea in Jiangxi, China 2017.";
Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
[120] {ECO:0000313|EMBL:SNQ27890.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PEDV/AUSTRIA/L01062-M10_15-01/2015
{ECO:0000313|EMBL:SNT95674.1},
PEDV/AUSTRIA/L01063-M10_15-02/2015 {ECO:0000313|EMBL:SNQ28000.1},
PEDV/AUSTRIA/L01064-M10_15-03/2015 {ECO:0000313|EMBL:SNQ28054.1},
PEDV/AUSTRIA/L01065-M10_15-04/2015 {ECO:0000313|EMBL:SNQ27936.1},
PEDV/GER/L00798-K11_14-02/2014 {ECO:0000313|EMBL:SNQ28073.1},
PEDV/GER/L00799-K11_14-01/2014 {ECO:0000313|EMBL:SNT95668.1},
PEDV/GER/L00855-K14_14-02/2014 {ECO:0000313|EMBL:SNQ28085.1},
PEDV/GER/L00857-K14_14-04/2014 {ECO:0000313|EMBL:SNQ28014.1},
PEDV/GER/L00862/2014 {ECO:0000313|EMBL:SNQ28091.1},
PEDV/GER/L00906-K16_14-01/2014 {ECO:0000313|EMBL:SNQ27994.1},
PEDV/GER/L00907-K16_14-02/2014 {ECO:0000313|EMBL:SNT95656.1},
PEDV/GER/L00908-K16_14-03/2014 {ECO:0000313|EMBL:SNQ27964.1},
PEDV/GER/L00918-K17_14-01/2014 {ECO:0000313|EMBL:SNQ27982.1},
PEDV/GER/L00919-K17_14-02/2014 {ECO:0000313|EMBL:SNQ27910.1},
PEDV/GER/L00926-K20_4-01/2014 {ECO:0000313|EMBL:SNQ27896.1},
PEDV/GER/L00927-K20_14-02/2014 {ECO:0000313|EMBL:SNQ27988.1},
PEDV/GER/L00928-K20_14-03/2014 {ECO:0000313|EMBL:SNT95680.1},
PEDV/GER/L00931-K22_14-03/2014 {ECO:0000313|EMBL:SNQ28035.1},
PEDV/GER/L00932-K22_14-04/2014 {ECO:0000313|EMBL:SNQ28025.1},
PEDV/GER/L00933-K22_14-05/2014 {ECO:0000313|EMBL:SNQ28067.1},
PEDV/GER/L00998-K06_15-03/2015 {ECO:0000313|EMBL:SNQ27977.1},
PEDV/GER/L00999-K06_15-07/2015 {ECO:0000313|EMBL:SNQ27944.1},
PEDV/GER/L01011-K01_15-01/2015 {ECO:0000313|EMBL:SNQ27970.1},
PEDV/GER/L01012-K01_15-02/2015 {ECO:0000313|EMBL:SNQ27937.1},
PEDV/GER/L01013-K01_15-03/2015 {ECO:0000313|EMBL:SNQ27890.1},
PEDV/GER/L01014-K01_15-04/2015 {ECO:0000313|EMBL:SNQ27952.1},
PEDV/GER/L01015-K01_15-05/2015 {ECO:0000313|EMBL:SNQ28060.1},
PEDV/GER/L01017-K01_15-07/2015 {ECO:0000313|EMBL:SNQ27927.1},
PEDV/GER/L01018-K01_15-08/2015 {ECO:0000313|EMBL:SNQ27920.1},
PEDV/GER/L01019-K01_15-09/2015 {ECO:0000313|EMBL:SNQ27958.1},
PEDV/GER/L01020-K01_15-10/2015 {ECO:0000313|EMBL:SNQ27902.1},
PEDV/GER/L01059-K07_15-01/2015 {ECO:0000313|EMBL:SNQ28041.1},
PEDV/GER/L01060-K07_15-02/2015 {ECO:0000313|EMBL:SNQ27915.1},
PEDV/GER/L01061-K07_15-03/2015 {ECO:0000313|EMBL:SNT95662.1},
PEDV/GER/L01420-K06_15-04/2015 {ECO:0000313|EMBL:SNQ28079.1},
PEDV/ROMANIA/L01329-K25_15-01/2015 {ECO:0000313|EMBL:SNQ28019.1}, and
PEDV/ROMANIA/L01330-K25_15-02/2015 {ECO:0000313|EMBL:SNQ28048.1};
Kim H.J., Triplett B.A.;
Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
[121] {ECO:0000313|EMBL:ATY72309.1}
NUCLEOTIDE SEQUENCE.
STRAIN=NW17 {ECO:0000313|EMBL:ATY72309.1};
Liu C., Dong J., Zhang X., Chen R., Du E.;
"Complete Genome Sequence of Porcine Epidemic Diarrhea Virus Strain
NW17 Isolated in China.";
Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
[122] {ECO:0000313|EMBL:ATY72315.1}
NUCLEOTIDE SEQUENCE.
STRAIN=NW8 {ECO:0000313|EMBL:ATY72315.1};
Liu C., Dong J., Zhang X., Chen R., Du E.;
"Complete Genome Sequence of Porcine Epidemic Diarrhea Virus Strain
NW8 in China.";
Submitted (AUG-2017) to the EMBL/GenBank/DDBJ databases.
[123] {ECO:0000313|EMBL:AWQ28491.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PC273/O {ECO:0000313|EMBL:AWQ28491.1};
PubMed=29789941;
Su Y., Hou Y., Prarat M., Zhang Y., Wang Q.;
"New variants of porcine epidemic diarrhea virus with large deletions
in the spike protein, identified in the United States, 2016-2017.";
Arch. Virol. 0:0-0(2018).
[124] {ECO:0000313|EMBL:ATJ03685.1}
NUCLEOTIDE SEQUENCE.
STRAIN=13-JM127 {ECO:0000313|EMBL:ATJ03686.1},
13-JM128 {ECO:0000313|EMBL:ATJ03687.1},
14JM-01 {ECO:0000313|EMBL:ATJ03685.1},
14JM-144 {ECO:0000313|EMBL:ATJ03688.1},
14JM-208 {ECO:0000313|EMBL:ATJ03689.1},
14JM-216 {ECO:0000313|EMBL:ATJ03690.1},
16JM-334 {ECO:0000313|EMBL:ATJ03693.1}, and
16JM-339 {ECO:0000313|EMBL:ATJ03694.1};
PubMed=29540176;
Van Diep N., Sueyoshi M., Norimine J., Hirai T., Myint O., Teh A.P.,
Izzati U.Z., Fuke N., Yamaguchi R.;
"Molecular characterization of US-like and Asian non-S INDEL strains
of porcine epidemic diarrhea virus (PEDV) that circulated in Japan
during 2013-2016 and PEDVs collected from recurrent outbreaks.";
BMC Vet. Res. 14:96-96(2018).
[125] {ECO:0000313|EMBL:AWV57051.1}
NUCLEOTIDE SEQUENCE.
STRAIN=GDS10 {ECO:0000313|EMBL:AWV57051.1};
PubMed=29879479;
Gong L., Li J., Zhou Q., Lin Y., Qin J., Xue C., Cao Y.;
"Insights into recombination-like events leading to outbreaks in USA
through a retrospective study of porcine epidemic diarrhea virus
isolates from China.";
Infect. Genet. Evol. 63:216-218(2018).
[126] {ECO:0000313|EMBL:AWM11471.1}
NUCLEOTIDE SEQUENCE.
STRAIN=KNU-1704 {ECO:0000313|EMBL:AWM11471.1},
KNU-1708 {ECO:0000313|EMBL:AWM11489.1}, and
KNU-1709 {ECO:0000313|EMBL:AWM11495.1};
PubMed=29770590;
Lee S., Lee C.;
"Genomic and antigenic characterization of porcine epidemic diarrhoea
virus strains isolated from South Korea, 2017.";
Transbound. Emerg. Dis. 0:0-0(2018).
[127] {ECO:0000313|EMBL:AUV64575.1}
NUCLEOTIDE SEQUENCE.
PubMed=29368629; DOI=.1186/s13567-018-0505-2;
Gallien S., Moro A., Lediguerher G., Catinot V., Paboeuf F.,
Bigault L., Berri M., Gauger P.C., Pozzi N., Authie E., Rose N.,
Grasland B.;
"Evidence of porcine epidemic diarrhea virus (PEDV) shedding in semen
from infected specific pathogen-free boars.";
Vet. Res. 49:7-7(2018).
[128] {ECO:0000313|EMBL:AVI57399.1}
NUCLEOTIDE SEQUENCE.
STRAIN=USA/OK10240-6/2017 {ECO:0000313|EMBL:AVI57399.1}, and
USA/OK10240-8/2017 {ECO:0000313|EMBL:AVI57406.1};
PubMed=29468451;
Zhang J., Yim-Im W., Chen Q., Zheng Y., Schumacher L., Huang H.,
Gauger P., Harmon K., Li G.;
"Identification of porcine epidemic diarrhea virus variant with a
large spike gene deletion from a clinical swine sample in the United
States.";
Virus Genes 0:0-0(2018).
[129] {ECO:0000313|EMBL:AVK78144.1}
NUCLEOTIDE SEQUENCE.
STRAIN=CHN/SH-2012-5/2012 {ECO:0000313|EMBL:AVK78144.1}, and
CHN/SH-2016-4/2016 {ECO:0000313|EMBL:AVK78150.1};
Gaut B.S., Morton B.R., Clegg M.T., Duvall M.R.;
Submitted (JAN-2018) to the EMBL/GenBank/DDBJ databases.
[130] {ECO:0000313|EMBL:AVU05392.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PEDV/MEX/JAL/04/2017 {ECO:0000313|EMBL:AVU05392.1},
PEDV/MEX/JAL/05/2017 {ECO:0000313|EMBL:AVU05399.1},
PEDV/MEX/MICH/01/2013 {ECO:0000313|EMBL:AVU05413.1},
PEDV/MEX/MICH/02/2015 {ECO:0000313|EMBL:AVU05448.1},
PEDV/MEX/MICH/19/2013 {ECO:0000313|EMBL:AVU05420.1},
PEDV/MEX/PUE/01/2016 {ECO:0000313|EMBL:AVU05455.1},
PEDV/MEX/QRO/01/2017 {ECO:0000313|EMBL:AVU05497.1},
PEDV/MEX/QRO/02/2017 {ECO:0000313|EMBL:AVU05504.1},
PEDV/MEX/SON/01/2015 {ECO:0000313|EMBL:AVU05476.1},
PEDV/MEX/VER/01/2014 {ECO:0000313|EMBL:AVU05434.1},
PEDV/MEX/VER/01/2015 {ECO:0000313|EMBL:AVU05483.1}, and
PEDV/MEX/VER/02/2015 {ECO:0000313|EMBL:AVU05490.1};
Lara-Romero R., Martinez-Bautista R., Cerriteno-Sanchez J.L.,
Gomez-Nunez L., Mendoza-Elvira S., Ramirez-Mendoza H.,
Gonzalez-Martinez A.R., Rivera-Benitez J.F.;
"Evolution of Porcine epidemic diarrhea virus in Mexico.";
Submitted (FEB-2018) to the EMBL/GenBank/DDBJ databases.
[131] {ECO:0000313|EMBL:AVU05427.1}
NUCLEOTIDE SEQUENCE.
STRAIN=PEDV/MEX/GTO/01/2013 {ECO:0000313|EMBL:AVU05427.1}, and
PEDV/MEX/MICH/02/2013 {ECO:0000313|EMBL:AVU05469.1};
Lara-Romero R., Martinez-Bautista R., Cerriteno-Sanchez J.L.,
Gomez-Nunez L., Mendoza-Elvira S., Ramirez-Mendoza H.,
Gonzalez-Martinez A.R., Rivera-Benitez J.F.;
"Evolution of Porcine epidemic diarrhea virus.";
Submitted (FEB-2018) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: Component of the viral envelope that plays a central
role in virus morphogenesis and assembly via its interactions with
other viral proteins. {ECO:0000256|RuleBase:RU363118,
ECO:0000256|SAAS:SAAS01047166}.
-!- SUBUNIT: Homomultimer. Interacts with envelope E protein in the
budding compartment of the host cell, which is located between
endoplasmic reticulum and the Golgi complex. Forms a complex with
HE and S proteins. Interacts with nucleocapsid N protein. This
interaction probably participates in RNA packaging into the virus.
{ECO:0000256|RuleBase:RU363118, ECO:0000256|SAAS:SAAS01047165}.
-!- SUBCELLULAR LOCATION: Host Golgi apparatus membrane
{ECO:0000256|RuleBase:RU363118}; Multi-pass membrane protein
{ECO:0000256|RuleBase:RU363118}. Virion membrane
{ECO:0000256|RuleBase:RU363118, ECO:0000256|SAAS:SAAS00577616};
Multi-pass membrane protein {ECO:0000256|RuleBase:RU363118,
ECO:0000256|SAAS:SAAS00577616}.
-!- SIMILARITY: Belongs to the alphacoronaviruses M protein family.
{ECO:0000256|RuleBase:RU363118}.
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EMBL; EU031893; ABS72126.1; -; Genomic_RNA.
EMBL; EU542416; ACA81417.1; -; Genomic_RNA.
EMBL; EU542417; ACA81418.1; -; Genomic_RNA.
EMBL; EU542419; ACA81420.1; -; Genomic_RNA.
EMBL; FJ196191; ACN23187.1; -; mRNA.
EMBL; FJ196192; ACN23188.1; -; mRNA.
EMBL; FJ196193; ACN23189.1; -; mRNA.
EMBL; FJ196194; ACN23190.1; -; mRNA.
EMBL; FJ196195; ACN23191.1; -; mRNA.
EMBL; FJ687462; ACV81762.1; -; Genomic_RNA.
EMBL; FJ687463; ACV81763.1; -; Genomic_RNA.
EMBL; FJ687464; ACV81764.1; -; Genomic_RNA.
EMBL; FJ687466; ACV81766.1; -; Genomic_RNA.
EMBL; FJ687467; ACV81767.1; -; Genomic_RNA.
EMBL; FJ687468; ACV81768.1; -; Genomic_RNA.
EMBL; FJ687469; ACV81769.1; -; Genomic_RNA.
EMBL; FJ687470; ACV81770.1; -; Genomic_RNA.
EMBL; FJ687473; ACV81773.1; -; Genomic_RNA.
EMBL; JF690779; AEE38482.1; -; Genomic_RNA.
EMBL; JN083788; AER35140.1; -; Genomic_RNA.
EMBL; JN089722; AER39403.1; -; Viral_cRNA.
EMBL; JN089723; AER39404.1; -; Viral_cRNA.
EMBL; JN089725; AER39406.1; -; Viral_cRNA.
EMBL; JN089729; AER39410.1; -; Viral_cRNA.
EMBL; JN089738; AER39419.1; -; Viral_cRNA.
EMBL; JN089744; AER39425.1; -; Viral_cRNA.
EMBL; JN173327; AET71226.1; -; Genomic_RNA.
EMBL; JN173329; AET71228.1; -; Genomic_RNA.
EMBL; JN173330; AET71229.1; -; Genomic_RNA.
EMBL; JN173331; AET71230.1; -; Genomic_RNA.
EMBL; JN173332; AET71231.1; -; Genomic_RNA.
EMBL; JN173333; AET71232.1; -; Genomic_RNA.
EMBL; JN173334; AET71233.1; -; Genomic_RNA.
EMBL; JN173335; AET71234.1; -; Genomic_RNA.
EMBL; JN584168; AEW24874.1; -; Genomic_RNA.
EMBL; JN400907; AEW24885.1; -; Genomic_RNA.
EMBL; JQ282909; AFB77237.1; -; Genomic_RNA.
EMBL; JQ390544; AFD98088.1; -; Genomic_RNA.
EMBL; JQ305129; AFF60686.1; -; Genomic_RNA.
EMBL; JQ305130; AFF60687.1; -; Genomic_RNA.
EMBL; JQ305131; AFF60688.1; -; Genomic_RNA.
EMBL; JQ305132; AFF60689.1; -; Genomic_RNA.
EMBL; JQ664730; AFJ80124.1; -; Genomic_RNA.
EMBL; JQ678035; AFK08618.1; -; Genomic_RNA.
EMBL; JX088695; AFP36392.1; -; Genomic_RNA.
EMBL; JX163295; AFQ37429.1; -; Genomic_RNA.
EMBL; JX435308; AFU35757.1; -; mRNA.
EMBL; JX435309; AFU35758.1; -; mRNA.
EMBL; JX435310; AFU35759.1; -; mRNA.
EMBL; JX435315; AFU35764.1; -; mRNA.
EMBL; JX435316; AFU35765.1; -; mRNA.
EMBL; JX501328; AFV59250.1; -; Genomic_RNA.
EMBL; KC148526; AFZ85188.1; -; Genomic_RNA.
EMBL; KC176073; AFZ85189.1; -; Genomic_RNA.
EMBL; KC210145; AGG55740.1; -; Genomic_RNA.
EMBL; KC210147; AGG55753.1; -; Genomic_RNA.
EMBL; KC140102; AGK89917.1; -; Genomic_RNA.
EMBL; KF272920; AGO58927.1; -; Genomic_RNA.
EMBL; KF267450; AGS12452.1; -; Genomic_RNA.
EMBL; KC836505; AGV05242.1; -; Genomic_RNA.
EMBL; KC836511; AGV05248.1; -; Genomic_RNA.
EMBL; KC836512; AGV05249.1; -; Genomic_RNA.
EMBL; KC836514; AGV05251.1; -; Genomic_RNA.
EMBL; KC836515; AGV05252.1; -; Genomic_RNA.
EMBL; KC836516; AGV05253.1; -; Genomic_RNA.
EMBL; KC836517; AGV05254.1; -; Genomic_RNA.
EMBL; KF468752; AGY31025.1; -; Genomic_RNA.
EMBL; KF468753; AGY31031.1; -; Genomic_RNA.
EMBL; KF468754; AGY31037.1; -; Genomic_RNA.
EMBL; KF650370; AHA38121.1; -; Genomic_RNA.
EMBL; KF650371; AHA38128.1; -; Genomic_RNA.
EMBL; KF650372; AHA38135.1; -; Genomic_RNA.
EMBL; KF650373; AHA38142.1; -; Genomic_RNA.
EMBL; KF650374; AHA38149.1; -; Genomic_RNA.
EMBL; KF650375; AHA38156.1; -; Genomic_RNA.
EMBL; KF804028; AHA38163.1; -; Genomic_RNA.
EMBL; KF452322; AHC03505.1; -; Genomic_RNA.
EMBL; KF452323; AHC03511.1; -; Genomic_RNA.
EMBL; KF760557; AHF20048.1; -; Genomic_RNA.
EMBL; KF779470; AHG99157.1; -; Genomic_RNA.
EMBL; KJ001722; AHK25060.1; -; Genomic_RNA.
EMBL; KJ001723; AHK25061.1; -; Genomic_RNA.
EMBL; KJ001725; AHK25063.1; -; Genomic_RNA.
EMBL; KJ001728; AHK25066.1; -; Genomic_RNA.
EMBL; KJ001729; AHK25067.1; -; Genomic_RNA.
EMBL; KJ001730; AHK25068.1; -; Genomic_RNA.
EMBL; KJ001731; AHK25069.1; -; Genomic_RNA.
EMBL; KJ001736; AHK25074.1; -; Genomic_RNA.
EMBL; KJ001739; AHK25077.1; -; Genomic_RNA.
EMBL; KJ001740; AHK25078.1; -; Genomic_RNA.
EMBL; KJ399978; AHL38187.1; -; Genomic_RNA.
EMBL; KJ020932; AHM88220.1; -; Genomic_RNA.
EMBL; KJ408801; AHN60055.1; -; Genomic_RNA.
EMBL; KJ588062; AHX58673.1; -; Genomic_RNA.
EMBL; KJ588063; AHX58679.1; -; Genomic_RNA.
EMBL; KJ588064; AHX58685.1; -; Genomic_RNA.
EMBL; KJ623926; AHY04232.1; -; Genomic_RNA.
EMBL; KJ778616; AHZ94890.1; -; Genomic_RNA.
EMBL; KJ584361; AIA61017.1; -; Genomic_RNA.
EMBL; KJ646600; AIC82407.1; -; Genomic_RNA.
EMBL; KJ646608; AIC82415.1; -; Genomic_RNA.
EMBL; KJ642643; AIC83852.1; -; Genomic_RNA.
EMBL; KJ645635; AID56670.1; -; Genomic_RNA.
EMBL; KJ645636; AID56676.1; -; Genomic_RNA.
EMBL; KJ645637; AID56682.1; -; Genomic_RNA.
EMBL; KJ645638; AID56688.1; -; Genomic_RNA.
EMBL; KJ645639; AID56694.1; -; Genomic_RNA.
EMBL; KJ645640; AID56700.1; -; Genomic_RNA.
EMBL; KJ645641; AID56706.1; -; Genomic_RNA.
EMBL; KJ645642; AID56712.1; -; Genomic_RNA.
EMBL; KJ645643; AID56718.1; -; Genomic_RNA.
EMBL; KJ645645; AID56730.1; -; Genomic_RNA.
EMBL; KJ645646; AID56736.1; -; Genomic_RNA.
EMBL; KJ645647; AID56742.1; -; Genomic_RNA.
EMBL; KJ645648; AID56748.1; -; Genomic_RNA.
EMBL; KJ645649; AID56754.1; -; Genomic_RNA.
EMBL; KJ645650; AID56760.1; -; Genomic_RNA.
EMBL; KJ645651; AID56766.1; -; Genomic_RNA.
EMBL; KJ645652; AID56772.1; -; Genomic_RNA.
EMBL; KJ645653; AID56778.1; -; Genomic_RNA.
EMBL; KJ645654; AID56784.1; -; Genomic_RNA.
EMBL; KJ645655; AID56790.1; -; Genomic_RNA.
EMBL; KJ645656; AID56796.1; -; Genomic_RNA.
EMBL; KJ645657; AID56802.1; -; Genomic_RNA.
EMBL; KJ645658; AID56808.1; -; Genomic_RNA.
EMBL; KJ645659; AID56814.1; -; Genomic_RNA.
EMBL; KJ645660; AID56820.1; -; Genomic_RNA.
EMBL; KJ645661; AID56826.1; -; Genomic_RNA.
EMBL; KJ645662; AID56832.1; -; Genomic_RNA.
EMBL; KJ645663; AID56838.1; -; Genomic_RNA.
EMBL; KJ645664; AID56844.1; -; Genomic_RNA.
EMBL; KJ645665; AID56850.1; -; Genomic_RNA.
EMBL; KJ645666; AID56856.1; -; Genomic_RNA.
EMBL; KJ645667; AID56862.1; -; Genomic_RNA.
EMBL; KJ645668; AID56868.1; -; Genomic_RNA.
EMBL; KJ645669; AID56874.1; -; Genomic_RNA.
EMBL; KJ645670; AID56880.1; -; Genomic_RNA.
EMBL; KJ645671; AID56886.1; -; Genomic_RNA.
EMBL; KJ645672; AID56892.1; -; Genomic_RNA.
EMBL; KJ645673; AID56898.1; -; Genomic_RNA.
EMBL; KJ645675; AID56910.1; -; Genomic_RNA.
EMBL; KJ645676; AID56916.1; -; Genomic_RNA.
EMBL; KJ645677; AID56922.1; -; Genomic_RNA.
EMBL; KJ645678; AID56928.1; -; Genomic_RNA.
EMBL; KJ645679; AID56934.1; -; Genomic_RNA.
EMBL; KJ645680; AID56940.1; -; Genomic_RNA.
EMBL; KJ645681; AID56946.1; -; Genomic_RNA.
EMBL; KJ645682; AID56952.1; -; Genomic_RNA.
EMBL; KJ645683; AID56958.1; -; Genomic_RNA.
EMBL; KJ645684; AID56964.1; -; Genomic_RNA.
EMBL; KJ645685; AID56970.1; -; Genomic_RNA.
EMBL; KJ645686; AID56976.1; -; Genomic_RNA.
EMBL; KJ645687; AID56982.1; -; Genomic_RNA.
EMBL; KJ645688; AID56988.1; -; Genomic_RNA.
EMBL; KJ645689; AID56994.1; -; Genomic_RNA.
EMBL; KJ645690; AID57000.1; -; Genomic_RNA.
EMBL; KJ645691; AID57006.1; -; Genomic_RNA.
EMBL; KJ645692; AID57012.1; -; Genomic_RNA.
EMBL; KJ645693; AID57018.1; -; Genomic_RNA.
EMBL; KJ645694; AID57024.1; -; Genomic_RNA.
EMBL; KJ645695; AID57030.1; -; Genomic_RNA.
EMBL; KJ645696; AID57036.1; -; Genomic_RNA.
EMBL; KJ645697; AID57042.1; -; Genomic_RNA.
EMBL; KJ645698; AID57048.1; -; Genomic_RNA.
EMBL; KJ645699; AID57054.1; -; Genomic_RNA.
EMBL; KJ645700; AID57060.1; -; Genomic_RNA.
EMBL; KJ645701; AID57066.1; -; Genomic_RNA.
EMBL; KJ645702; AID57072.1; -; Genomic_RNA.
EMBL; KJ645703; AID57078.1; -; Genomic_RNA.
EMBL; KJ645704; AID57084.1; -; Genomic_RNA.
EMBL; KJ645705; AID57090.1; -; Genomic_RNA.
EMBL; KJ645706; AID57096.1; -; Genomic_RNA.
EMBL; KJ645707; AID57102.1; -; Genomic_RNA.
EMBL; KJ645708; AID57108.1; -; Genomic_RNA.
EMBL; KJ662670; AID66724.1; -; Genomic_RNA.
EMBL; KF840537; AIE15938.1; -; Genomic_RNA.
EMBL; KF840540; AIE15953.1; -; Genomic_RNA.
EMBL; KF840544; AIE15973.1; -; Genomic_RNA.
EMBL; KF840545; AIE15978.1; -; Genomic_RNA.
EMBL; KF840546; AIE15983.1; -; Genomic_RNA.
EMBL; KF840547; AIE15989.1; -; Genomic_RNA.
EMBL; KF840548; AIE15993.1; -; Genomic_RNA.
EMBL; KF840549; AIE15998.1; -; Genomic_RNA.
EMBL; KF840550; AIE16003.1; -; Genomic_RNA.
EMBL; KF840551; AIE16008.1; -; Genomic_RNA.
EMBL; KF840552; AIE16013.1; -; Genomic_RNA.
EMBL; KF840555; AIE16028.1; -; Genomic_RNA.
EMBL; KF840556; AIE16033.1; -; Genomic_RNA.
EMBL; KF840557; AIE16038.1; -; Genomic_RNA.
EMBL; KJ777677; AIJ01338.1; -; Genomic_RNA.
EMBL; KM077139; AIK28711.1; -; Genomic_RNA.
EMBL; KM052365; AIK69678.1; -; Genomic_RNA.
EMBL; KJ184549; AIM47751.1; -; Genomic_RNA.
EMBL; KM392224; AIN52091.1; -; Genomic_RNA.
EMBL; KM392226; AIN52103.1; -; Genomic_RNA.
EMBL; KM392227; AIN52109.1; -; Genomic_RNA.
EMBL; KM392228; AIN52115.1; -; Genomic_RNA.
EMBL; KM392229; AIN52121.1; -; Genomic_RNA.
EMBL; KM392230; AIN52127.1; -; Genomic_RNA.
EMBL; KM392231; AIN52133.1; -; Genomic_RNA.
EMBL; KM392232; AIN52139.1; -; Genomic_RNA.
EMBL; KM189367; AIP84470.1; -; Genomic_RNA.
EMBL; KM403155; AIR95868.1; -; Genomic_RNA.
EMBL; KM048283; AIT56242.1; -; Genomic_RNA.
EMBL; KM048287; AIT56246.1; -; Genomic_RNA.
EMBL; KM048288; AIT56247.1; -; Genomic_RNA.
EMBL; KM048291; AIT56250.1; -; Genomic_RNA.
EMBL; KM048295; AIT56254.1; -; Genomic_RNA.
EMBL; KM048296; AIT56255.1; -; Genomic_RNA.
EMBL; KJ526096; AJD07369.1; -; Genomic_RNA.
EMBL; KJ526105; AJD07379.1; -; Genomic_RNA.
EMBL; KJ526106; AJD07380.1; -; Genomic_RNA.
EMBL; KJ526107; AJD07381.1; -; Genomic_RNA.
EMBL; KJ526108; AJD07382.1; -; Genomic_RNA.
EMBL; KJ526111; AJD07385.1; -; Genomic_RNA.
EMBL; KJ857388; AJD09511.1; -; Genomic_RNA.
EMBL; KJ857389; AJD09512.1; -; Genomic_RNA.
EMBL; KJ857391; AJD09514.1; -; Genomic_RNA.
EMBL; KJ857393; AJD09516.1; -; Genomic_RNA.
EMBL; KJ857394; AJD09517.1; -; Genomic_RNA.
EMBL; KJ857401; AJD09524.1; -; Genomic_RNA.
EMBL; KM609203; AJP67399.1; -; Genomic_RNA.
EMBL; KM609205; AJP67411.1; -; Genomic_RNA.
EMBL; KM609206; AJP67417.1; -; Genomic_RNA.
EMBL; KM609207; AJP67423.1; -; Genomic_RNA.
EMBL; KM609209; AJP67435.1; -; Genomic_RNA.
EMBL; KM609210; AJP67441.1; -; Genomic_RNA.
EMBL; KM609211; AJP67447.1; -; Genomic_RNA.
EMBL; KM609212; AJP67453.1; -; Genomic_RNA.
EMBL; KM609213; AJP67459.1; -; Genomic_RNA.
EMBL; KP202365; AKA88562.1; -; Genomic_RNA.
EMBL; KR003452; AKC34875.1; -; Genomic_RNA.
EMBL; KR011756; AKE47381.1; -; Genomic_RNA.
EMBL; KR265759; AKJ21704.1; -; Genomic_RNA.
EMBL; KR265760; AKJ21710.1; -; Genomic_RNA.
EMBL; KR265761; AKJ21716.1; -; Genomic_RNA.
EMBL; KR265762; AKJ21722.1; -; Genomic_RNA.
EMBL; KR265763; AKJ21728.1; -; Genomic_RNA.
EMBL; KR265764; AKJ21734.1; -; Genomic_RNA.
EMBL; KR265765; AKJ21740.1; -; Genomic_RNA.
EMBL; KR265766; AKJ21746.1; -; Genomic_RNA.
EMBL; KR265767; AKJ21752.1; -; Genomic_RNA.
EMBL; KR265768; AKJ21758.1; -; Genomic_RNA.
EMBL; KR265769; AKJ21764.1; -; Genomic_RNA.
EMBL; KR265770; AKJ21770.1; -; Genomic_RNA.
EMBL; KR265771; AKJ21776.1; -; Genomic_RNA.
EMBL; KR265772; AKJ21782.1; -; Genomic_RNA.
EMBL; KR265773; AKJ21788.1; -; Genomic_RNA.
EMBL; KR265774; AKJ21794.1; -; Genomic_RNA.
EMBL; KR265775; AKJ21800.1; -; Genomic_RNA.
EMBL; KR265776; AKJ21806.1; -; Genomic_RNA.
EMBL; KR265777; AKJ21812.1; -; Genomic_RNA.
EMBL; KR265778; AKJ21818.1; -; Genomic_RNA.
EMBL; KR265779; AKJ21824.1; -; Genomic_RNA.
EMBL; KR265780; AKJ21830.1; -; Genomic_RNA.
EMBL; KR265781; AKJ21836.1; -; Genomic_RNA.
EMBL; KR265782; AKJ21842.1; -; Genomic_RNA.
EMBL; KR265783; AKJ21848.1; -; Genomic_RNA.
EMBL; KR265784; AKJ21854.1; -; Genomic_RNA.
EMBL; KR265785; AKJ21860.1; -; Genomic_RNA.
EMBL; KR265786; AKJ21866.1; -; Genomic_RNA.
EMBL; KR265787; AKJ21872.1; -; Genomic_RNA.
EMBL; KR265788; AKJ21878.1; -; Genomic_RNA.
EMBL; KR265789; AKJ21884.1; -; Genomic_RNA.
EMBL; KR265790; AKJ21890.1; -; Genomic_RNA.
EMBL; KR265791; AKJ21896.1; -; Genomic_RNA.
EMBL; KR265792; AKJ21902.1; -; Genomic_RNA.
EMBL; KR265793; AKJ21908.1; -; Genomic_RNA.
EMBL; KR265794; AKJ21914.1; -; Genomic_RNA.
EMBL; KR265795; AKJ21920.1; -; Genomic_RNA.
EMBL; KR265796; AKJ21926.1; -; Genomic_RNA.
EMBL; KR265797; AKJ21932.1; -; Genomic_RNA.
EMBL; KR265798; AKJ21938.1; -; Genomic_RNA.
EMBL; KR265799; AKJ21944.1; -; Genomic_RNA.
EMBL; KR265800; AKJ21950.1; -; Genomic_RNA.
EMBL; KR265801; AKJ21956.1; -; Genomic_RNA.
EMBL; KR265802; AKJ21962.1; -; Genomic_RNA.
EMBL; KR265803; AKJ21968.1; -; Genomic_RNA.
EMBL; KR265804; AKJ21974.1; -; Genomic_RNA.
EMBL; KR265805; AKJ21980.1; -; Genomic_RNA.
EMBL; KR265806; AKJ21986.1; -; Genomic_RNA.
EMBL; KR265807; AKJ21992.1; -; Genomic_RNA.
EMBL; KR265808; AKJ21998.1; -; Genomic_RNA.
EMBL; KR265809; AKJ22004.1; -; Genomic_RNA.
EMBL; KR265810; AKJ22010.1; -; Genomic_RNA.
EMBL; KR265811; AKJ22016.1; -; Genomic_RNA.
EMBL; KR265812; AKJ22022.1; -; Genomic_RNA.
EMBL; KR265813; AKJ22028.1; -; Genomic_RNA.
EMBL; KR265814; AKJ22034.1; -; Genomic_RNA.
EMBL; KR265815; AKJ22040.1; -; Genomic_RNA.
EMBL; KR265816; AKJ22046.1; -; Genomic_RNA.
EMBL; KR265817; AKJ22052.1; -; Genomic_RNA.
EMBL; KR265818; AKJ22058.1; -; Genomic_RNA.
EMBL; KR265819; AKJ22064.1; -; Genomic_RNA.
EMBL; KR265821; AKJ22076.1; -; Genomic_RNA.
EMBL; KR265822; AKJ22082.1; -; Genomic_RNA.
EMBL; KR265823; AKJ22088.1; -; Genomic_RNA.
EMBL; KR265825; AKJ22100.1; -; Genomic_RNA.
EMBL; KR265826; AKJ22106.1; -; Genomic_RNA.
EMBL; KR265827; AKJ22112.1; -; Genomic_RNA.
EMBL; KR265829; AKJ22124.1; -; Genomic_RNA.
EMBL; KR265830; AKJ22130.1; -; Genomic_RNA.
EMBL; KR265831; AKJ22136.1; -; Genomic_RNA.
EMBL; KR265832; AKJ22142.1; -; Genomic_RNA.
EMBL; KR265833; AKJ22148.1; -; Genomic_RNA.
EMBL; KR265834; AKJ22154.1; -; Genomic_RNA.
EMBL; KR265840; AKJ22178.1; -; Genomic_RNA.
EMBL; KR265841; AKJ22184.1; -; Genomic_RNA.
EMBL; KR265842; AKJ22190.1; -; Genomic_RNA.
EMBL; KR265843; AKJ22196.1; -; Genomic_RNA.
EMBL; KR265844; AKJ22202.1; -; Genomic_RNA.
EMBL; KR265846; AKJ22214.1; -; Genomic_RNA.
EMBL; KP688354; AKO63240.1; -; Viral_cRNA.
EMBL; KM975735; AKP80592.1; -; Genomic_RNA.
EMBL; KM975736; AKP80599.1; -; Genomic_RNA.
EMBL; KM975737; AKP80606.1; -; Genomic_RNA.
EMBL; KM975738; AKP80613.1; -; Genomic_RNA.
EMBL; KM975739; AKP80620.1; -; Genomic_RNA.
EMBL; KM975740; AKP80627.1; -; Genomic_RNA.
EMBL; KM975741; AKP80634.1; -; Genomic_RNA.
EMBL; KR078299; AKR05181.1; -; Genomic_RNA.
EMBL; KR078300; AKR05187.1; -; Genomic_RNA.
EMBL; KR873431; AKS50225.1; -; Genomic_RNA.
EMBL; KR873432; AKS50230.1; -; Genomic_RNA.
EMBL; KR873433; AKS50235.1; -; Genomic_RNA.
EMBL; KR873434; AKS50241.1; -; Genomic_RNA.
EMBL; KR873435; AKS50247.1; -; Genomic_RNA.
EMBL; KR873436; AKS50252.1; -; Genomic_RNA.
EMBL; KR873437; AKS50257.1; -; Genomic_RNA.
EMBL; KT021228; ALM09367.1; -; Genomic_RNA.
EMBL; KT021229; ALM09373.1; -; Genomic_RNA.
EMBL; KT021230; ALM09379.1; -; Genomic_RNA.
EMBL; KT021231; ALM09385.1; -; Genomic_RNA.
EMBL; KP641661; ALM31935.1; -; Genomic_RNA.
EMBL; KP641662; ALM31941.1; -; Genomic_RNA.
EMBL; KP641663; ALM31947.1; -; Genomic_RNA.
EMBL; KT199103; ALP06213.1; -; Genomic_RNA.
EMBL; KT941120; ALR74760.1; -; Genomic_RNA.
EMBL; KT323980; ALS35477.1; -; Genomic_RNA.
EMBL; KU297956; ALU34115.1; -; Genomic_RNA.
EMBL; KU569509; AMC39587.1; -; Genomic_RNA.
EMBL; KT591944; AMD11121.1; -; Genomic_RNA.
EMBL; KT860508; AMD11127.1; -; Genomic_RNA.
EMBL; KU380331; AMR59404.1; -; Genomic_RNA.
EMBL; KU975389; AMR60836.1; -; Genomic_RNA.
EMBL; KR153325; AMS37103.1; -; Genomic_RNA.
EMBL; KR153326; AMS37108.1; -; Genomic_RNA.
EMBL; KU252649; ANC68210.1; -; Genomic_RNA.
EMBL; KX010479; AND65696.1; -; Genomic_RNA.
EMBL; KX010480; AND65697.1; -; Genomic_RNA.
EMBL; KX010482; AND65699.1; -; Genomic_RNA.
EMBL; KX010483; AND65700.1; -; Genomic_RNA.
EMBL; KX010485; AND65702.1; -; Genomic_RNA.
EMBL; KX010486; AND65703.1; -; Genomic_RNA.
EMBL; KX010490; AND65707.1; -; Genomic_RNA.
EMBL; KX010491; AND65708.1; -; Genomic_RNA.
EMBL; KX010492; AND65709.1; -; Genomic_RNA.
EMBL; KX064280; AND76939.1; -; Genomic_RNA.
EMBL; KU982966; ANI85731.1; -; Genomic_RNA.
EMBL; KU982967; ANI85737.1; -; Genomic_RNA.
EMBL; KU982968; ANI85743.1; -; Genomic_RNA.
EMBL; KU982969; ANI85749.1; -; Genomic_RNA.
EMBL; KU982970; ANI85755.1; -; Genomic_RNA.
EMBL; KU982971; ANI85761.1; -; Genomic_RNA.
EMBL; KU982972; ANI85767.1; -; Genomic_RNA.
EMBL; KU982973; ANI85773.1; -; Genomic_RNA.
EMBL; KU982974; ANI85779.1; -; Genomic_RNA.
EMBL; KU982975; ANI85785.1; -; Genomic_RNA.
EMBL; KU982976; ANI85791.1; -; Genomic_RNA.
EMBL; KU982977; ANI85797.1; -; Genomic_RNA.
EMBL; KU982978; ANI85803.1; -; Genomic_RNA.
EMBL; KU982979; ANI85809.1; -; Genomic_RNA.
EMBL; KU982980; ANI85815.1; -; Genomic_RNA.
EMBL; KX253991; ANM27773.1; -; Genomic_RNA.
EMBL; KU847996; AOS89614.1; -; Genomic_RNA.
EMBL; KX066126; APD70937.1; -; Genomic_RNA.
EMBL; KY019623; APG31001.1; -; Genomic_RNA.
EMBL; KY019624; APG31008.1; -; Genomic_RNA.
EMBL; KX981440; APH81309.1; -; Genomic_RNA.
EMBL; KY070587; APR64498.1; -; Genomic_RNA.
EMBL; KU893861; APX42110.1; -; Genomic_RNA.
EMBL; KU893869; APX42116.1; -; Genomic_RNA.
EMBL; KX580953; AQK38171.1; -; Genomic_RNA.
EMBL; KX550281; AQT33897.1; -; Genomic_RNA.
EMBL; KX812524; AQW35016.1; -; Genomic_RNA.
EMBL; KY111278; AQY61722.1; -; Genomic_RNA.
EMBL; KX016034; ARJ54149.1; -; Genomic_RNA.
EMBL; KY198263; ARM53664.1; -; Genomic_RNA.
EMBL; KY198264; ARM53665.1; -; Genomic_RNA.
EMBL; KY198267; ARM53668.1; -; Genomic_RNA.
EMBL; KY198268; ARM53669.1; -; Genomic_RNA.
EMBL; KY198269; ARM53670.1; -; Genomic_RNA.
EMBL; KY198270; ARM53671.1; -; Genomic_RNA.
EMBL; KY198271; ARM53672.1; -; Genomic_RNA.
EMBL; KY198272; ARM53673.1; -; Genomic_RNA.
EMBL; KY198274; ARM53675.1; -; Genomic_RNA.
EMBL; KY198276; ARM53677.1; -; Genomic_RNA.
EMBL; KY198277; ARM53678.1; -; Genomic_RNA.
EMBL; KY198280; ARM53681.1; -; Genomic_RNA.
EMBL; KY198281; ARM53682.1; -; Genomic_RNA.
EMBL; KY198283; ARM53684.1; -; Genomic_RNA.
EMBL; KY198285; ARM53686.1; -; Genomic_RNA.
EMBL; KY198286; ARM53687.1; -; Genomic_RNA.
EMBL; KY198288; ARM53689.1; -; Genomic_RNA.
EMBL; KY198289; ARM53690.1; -; Genomic_RNA.
EMBL; KY198290; ARM53691.1; -; Genomic_RNA.
EMBL; KY198291; ARM53692.1; -; Genomic_RNA.
EMBL; KY198292; ARM53693.1; -; Genomic_RNA.
EMBL; KY198295; ARM53696.1; -; Genomic_RNA.
EMBL; KY198296; ARM53697.1; -; Genomic_RNA.
EMBL; KY198297; ARM53698.1; -; Genomic_RNA.
EMBL; KY198298; ARM53699.1; -; Genomic_RNA.
EMBL; KY198299; ARM53700.1; -; Genomic_RNA.
EMBL; KY198300; ARM53701.1; -; Genomic_RNA.
EMBL; KX683006; ARM65487.1; -; Genomic_RNA.
EMBL; KY499261; ARM65493.1; -; Genomic_RNA.
EMBL; KY499262; ARM65499.1; -; Genomic_RNA.
EMBL; KY793536; ARQ03272.1; -; Genomic_RNA.
EMBL; KY825240; ASA40094.1; -; Genomic_RNA.
EMBL; KY825241; ASA40100.1; -; Genomic_RNA.
EMBL; KY825242; ASA40106.1; -; Genomic_RNA.
EMBL; KY825243; ASA40112.1; -; Genomic_RNA.
EMBL; KY963963; ASA69727.1; -; Genomic_RNA.
EMBL; KX289955; ASB30084.1; -; Genomic_RNA.
EMBL; KX852340; ASK39746.1; -; Genomic_RNA.
EMBL; KX852347; ASK39753.1; -; Genomic_RNA.
EMBL; KY619830; ATJ03685.1; -; Genomic_RNA.
EMBL; KY619831; ATJ03686.1; -; Genomic_RNA.
EMBL; KY619832; ATJ03687.1; -; Genomic_RNA.
EMBL; KY619833; ATJ03688.1; -; Genomic_RNA.
EMBL; KY619834; ATJ03689.1; -; Genomic_RNA.
EMBL; KY619835; ATJ03690.1; -; Genomic_RNA.
EMBL; KY619838; ATJ03693.1; -; Genomic_RNA.
EMBL; KY619839; ATJ03694.1; -; Genomic_RNA.
EMBL; MF782686; ATY72309.1; -; Genomic_RNA.
EMBL; MF782687; ATY72315.1; -; Genomic_RNA.
EMBL; MF375374; AUJ79487.1; -; Genomic_RNA.
EMBL; MF373643; AUV64575.1; -; Genomic_RNA.
EMBL; MG334554; AVI57399.1; -; Genomic_RNA.
EMBL; MG334555; AVI57406.1; -; Genomic_RNA.
EMBL; MG837011; AVK78144.1; -; Genomic_RNA.
EMBL; MG837012; AVK78150.1; -; Genomic_RNA.
EMBL; MH004419; AVU05392.1; -; Genomic_RNA.
EMBL; MH004420; AVU05399.1; -; Genomic_RNA.
EMBL; MH006957; AVU05413.1; -; Genomic_RNA.
EMBL; MH006958; AVU05420.1; -; Genomic_RNA.
EMBL; MH006959; AVU05427.1; -; Genomic_RNA.
EMBL; MH006960; AVU05434.1; -; Genomic_RNA.
EMBL; MH006962; AVU05448.1; -; Genomic_RNA.
EMBL; MH006963; AVU05455.1; -; Genomic_RNA.
EMBL; MH006965; AVU05469.1; -; Genomic_RNA.
EMBL; MH013462; AVU05476.1; -; Genomic_RNA.
EMBL; MH013463; AVU05483.1; -; Genomic_RNA.
EMBL; MH013464; AVU05490.1; -; Genomic_RNA.
EMBL; MH013465; AVU05497.1; -; Genomic_RNA.
EMBL; MH013466; AVU05504.1; -; Genomic_RNA.
EMBL; MH052683; AWM11471.1; -; Genomic_RNA.
EMBL; MH052687; AWM11489.1; -; Genomic_RNA.
EMBL; MH052688; AWM11495.1; -; Genomic_RNA.
EMBL; MG837058; AWQ28491.1; -; Genomic_RNA.
EMBL; MH107321; AWV57051.1; -; Genomic_RNA.
EMBL; LC022792; BAR92901.1; -; Genomic_RNA.
EMBL; LC093864; BAT31609.1; -; Genomic_RNA.
EMBL; LC063810; BAT33116.1; -; Genomic_RNA.
EMBL; LC063811; BAT33122.1; -; Genomic_RNA.
EMBL; LC063812; BAT33128.1; -; Genomic_RNA.
EMBL; LC063813; BAT33134.1; -; Genomic_RNA.
EMBL; LC063814; BAT33140.1; -; Genomic_RNA.
EMBL; LC063815; BAT33146.1; -; Genomic_RNA.
EMBL; LC063816; BAT33152.1; -; Genomic_RNA.
EMBL; LC063817; BAT33158.1; -; Genomic_RNA.
EMBL; LC063818; BAT33164.1; -; Genomic_RNA.
EMBL; LC063819; BAT33170.1; -; Genomic_RNA.
EMBL; LC063822; BAT33188.1; -; Genomic_RNA.
EMBL; LC063823; BAT33194.1; -; Genomic_RNA.
EMBL; LC063824; BAT33200.1; -; Genomic_RNA.
EMBL; LC063825; BAT33206.1; -; Genomic_RNA.
EMBL; LC063826; BAT33212.1; -; Genomic_RNA.
EMBL; LC063827; BAT33218.1; -; Genomic_RNA.
EMBL; LC063828; BAT33224.1; -; Genomic_RNA.
EMBL; LC063829; BAT33230.1; -; Genomic_RNA.
EMBL; LC063830; BAT33236.1; -; Genomic_RNA.
EMBL; LC063831; BAT33242.1; -; Genomic_RNA.
EMBL; LC063832; BAT33248.1; -; Genomic_RNA.
EMBL; LC063833; BAT33254.1; -; Genomic_RNA.
EMBL; LC063834; BAT33260.1; -; Genomic_RNA.
EMBL; LC063835; BAT33266.1; -; Genomic_RNA.
EMBL; LC063836; BAT33272.1; -; Genomic_RNA.
EMBL; LC063837; BAT33278.1; -; Genomic_RNA.
EMBL; LC063838; BAT33284.1; -; Genomic_RNA.
EMBL; LC063839; BAT33290.1; -; Genomic_RNA.
EMBL; LC063840; BAT33296.1; -; Genomic_RNA.
EMBL; LC063841; BAT33302.1; -; Genomic_RNA.
EMBL; LC063842; BAT33308.1; -; Genomic_RNA.
EMBL; LC063843; BAT33314.1; -; Genomic_RNA.
EMBL; LC063844; BAT33320.1; -; Genomic_RNA.
EMBL; LC063845; BAT33326.1; -; Genomic_RNA.
EMBL; LC063846; BAT33332.1; -; Genomic_RNA.
EMBL; LC063847; BAT33338.1; -; Genomic_RNA.
EMBL; LM645058; CDW77216.1; -; Genomic_RNA.
EMBL; LT898408; SNQ27890.1; -; Viral_cRNA.
EMBL; LT898415; SNQ27896.1; -; Viral_cRNA.
EMBL; LT898413; SNQ27902.1; -; Viral_cRNA.
EMBL; LT898421; SNQ27910.1; -; Viral_cRNA.
EMBL; LT898414; SNQ27915.1; -; Viral_cRNA.
EMBL; LT898411; SNQ27920.1; -; Viral_cRNA.
EMBL; LT898416; SNQ27927.1; -; Viral_cRNA.
EMBL; LT898418; SNQ27936.1; -; Viral_cRNA.
EMBL; LT898423; SNQ27937.1; -; Viral_cRNA.
EMBL; LT898409; SNQ27944.1; -; Viral_cRNA.
EMBL; LT898420; SNQ27952.1; -; Viral_cRNA.
EMBL; LT898412; SNQ27958.1; -; Viral_cRNA.
EMBL; LT898410; SNQ27964.1; -; Viral_cRNA.
EMBL; LT898432; SNQ27970.1; -; Viral_cRNA.
EMBL; LT898425; SNQ27977.1; -; Viral_cRNA.
EMBL; LT898431; SNQ27982.1; -; Viral_cRNA.
EMBL; LT898427; SNQ27988.1; -; Viral_cRNA.
EMBL; LT898430; SNQ27994.1; -; Viral_cRNA.
EMBL; LT898433; SNQ28000.1; -; Viral_cRNA.
EMBL; LT898426; SNQ28014.1; -; Viral_cRNA.
EMBL; LT898436; SNQ28019.1; -; Viral_cRNA.
EMBL; LT898438; SNQ28025.1; -; Viral_cRNA.
EMBL; LT898440; SNQ28035.1; -; Viral_cRNA.
EMBL; LT898439; SNQ28041.1; -; Viral_cRNA.
EMBL; LT898435; SNQ28048.1; -; Viral_cRNA.
EMBL; LT898441; SNQ28054.1; -; Viral_cRNA.
EMBL; LT898443; SNQ28060.1; -; Viral_cRNA.
EMBL; LT898446; SNQ28067.1; -; Viral_cRNA.
EMBL; LT898445; SNQ28073.1; -; Viral_cRNA.
EMBL; LT898444; SNQ28079.1; -; Viral_cRNA.
EMBL; LT898417; SNQ28085.1; -; Viral_cRNA.
EMBL; LT898447; SNQ28091.1; -; Viral_cRNA.
EMBL; LT900498; SNT95656.1; -; Viral_cRNA.
EMBL; LT900499; SNT95662.1; -; Viral_cRNA.
EMBL; LT900500; SNT95668.1; -; Viral_cRNA.
EMBL; LT900502; SNT95674.1; -; Viral_cRNA.
EMBL; LT900501; SNT95680.1; -; Viral_cRNA.
Proteomes; UP000096014; Genome.
Proteomes; UP000096231; Genome.
Proteomes; UP000096250; Genome.
Proteomes; UP000096695; Genome.
Proteomes; UP000096781; Genome.
Proteomes; UP000096896; Genome.
Proteomes; UP000096940; Genome.
Proteomes; UP000097091; Genome.
Proteomes; UP000097201; Genome.
Proteomes; UP000097739; Genome.
Proteomes; UP000097949; Genome.
Proteomes; UP000098101; Genome.
Proteomes; UP000098326; Genome.
Proteomes; UP000099262; Genome.
Proteomes; UP000099939; Genome.
Proteomes; UP000100204; Genome.
Proteomes; UP000100263; Genome.
Proteomes; UP000101279; Genome.
Proteomes; UP000101663; Genome.
Proteomes; UP000101883; Genome.
Proteomes; UP000102377; Genome.
Proteomes; UP000102422; Genome.
Proteomes; UP000102715; Genome.
Proteomes; UP000103144; Genome.
Proteomes; UP000103187; Genome.
Proteomes; UP000103230; Genome.
Proteomes; UP000103525; Genome.
Proteomes; UP000103873; Genome.
Proteomes; UP000104212; Genome.
Proteomes; UP000104329; Genome.
Proteomes; UP000104528; Genome.
Proteomes; UP000104629; Genome.
Proteomes; UP000104743; Genome.
Proteomes; UP000105572; Genome.
Proteomes; UP000105717; Genome.
Proteomes; UP000106279; Genome.
Proteomes; UP000106554; Genome.
Proteomes; UP000106837; Genome.
Proteomes; UP000107011; Genome.
Proteomes; UP000107079; Genome.
Proteomes; UP000107726; Genome.
Proteomes; UP000107825; Genome.
Proteomes; UP000107890; Genome.
Proteomes; UP000108853; Genome.
Proteomes; UP000108901; Genome.
Proteomes; UP000108998; Genome.
Proteomes; UP000109171; Genome.
Proteomes; UP000109281; Genome.
Proteomes; UP000109462; Genome.
Proteomes; UP000109730; Genome.
Proteomes; UP000109784; Genome.
Proteomes; UP000109960; Genome.
Proteomes; UP000110005; Genome.
Proteomes; UP000110085; Genome.
Proteomes; UP000110170; Genome.
Proteomes; UP000110553; Genome.
Proteomes; UP000110779; Genome.
Proteomes; UP000110780; Genome.
Proteomes; UP000111048; Genome.
Proteomes; UP000111596; Genome.
Proteomes; UP000111997; Genome.
Proteomes; UP000112445; Genome.
Proteomes; UP000112725; Genome.
Proteomes; UP000113629; Genome.
Proteomes; UP000113720; Genome.
Proteomes; UP000114176; Genome.
Proteomes; UP000114423; Genome.
Proteomes; UP000114426; Genome.
Proteomes; UP000114579; Genome.
Proteomes; UP000114584; Genome.
Proteomes; UP000114886; Genome.
Proteomes; UP000115696; Genome.
Proteomes; UP000115820; Genome.
Proteomes; UP000115913; Genome.
Proteomes; UP000116623; Genome.
Proteomes; UP000116900; Genome.
Proteomes; UP000117024; Genome.
Proteomes; UP000117314; Genome.
Proteomes; UP000117463; Genome.
Proteomes; UP000117465; Genome.
Proteomes; UP000117616; Genome.
Proteomes; UP000118055; Genome.
Proteomes; UP000118621; Genome.
Proteomes; UP000118902; Genome.
Proteomes; UP000119410; Genome.
Proteomes; UP000119498; Genome.
Proteomes; UP000119763; Genome.
Proteomes; UP000119870; Genome.
Proteomes; UP000120045; Genome.
Proteomes; UP000120106; Genome.
Proteomes; UP000120197; Genome.
Proteomes; UP000120281; Genome.
Proteomes; UP000120524; Genome.
Proteomes; UP000120529; Genome.
Proteomes; UP000120737; Genome.
Proteomes; UP000121150; Genome.
Proteomes; UP000121532; Genome.
Proteomes; UP000121581; Genome.
Proteomes; UP000122106; Genome.
Proteomes; UP000122204; Genome.
Proteomes; UP000122310; Genome.
Proteomes; UP000122774; Genome.
Proteomes; UP000122785; Genome.
Proteomes; UP000122852; Genome.
Proteomes; UP000123046; Genome.
Proteomes; UP000123112; Genome.
Proteomes; UP000123161; Genome.
Proteomes; UP000123657; Genome.
Proteomes; UP000124209; Genome.
Proteomes; UP000124555; Genome.
Proteomes; UP000124684; Genome.
Proteomes; UP000124742; Genome.
Proteomes; UP000124784; Genome.
Proteomes; UP000125425; Genome.
Proteomes; UP000125691; Genome.
Proteomes; UP000125786; Genome.
Proteomes; UP000126216; Genome.
Proteomes; UP000127334; Genome.
Proteomes; UP000127765; Genome.
Proteomes; UP000127953; Genome.
Proteomes; UP000127975; Genome.
Proteomes; UP000128202; Genome.
Proteomes; UP000128363; Genome.
Proteomes; UP000128879; Genome.
Proteomes; UP000128894; Genome.
Proteomes; UP000129574; Genome.
Proteomes; UP000130338; Genome.
Proteomes; UP000130438; Genome.
Proteomes; UP000130717; Genome.
Proteomes; UP000131126; Genome.
Proteomes; UP000131296; Genome.
Proteomes; UP000131950; Genome.
Proteomes; UP000132054; Genome.
Proteomes; UP000132225; Genome.
Proteomes; UP000132509; Genome.
Proteomes; UP000132713; Genome.
Proteomes; UP000132791; Genome.
Proteomes; UP000132921; Genome.
Proteomes; UP000133030; Genome.
Proteomes; UP000133192; Genome.
Proteomes; UP000133398; Genome.
Proteomes; UP000133657; Genome.
Proteomes; UP000133992; Genome.
Proteomes; UP000134050; Genome.
Proteomes; UP000134226; Genome.
Proteomes; UP000134395; Genome.
Proteomes; UP000134741; Genome.
Proteomes; UP000134981; Genome.
Proteomes; UP000135037; Genome.
Proteomes; UP000135153; Genome.
Proteomes; UP000135367; Genome.
Proteomes; UP000135502; Genome.
Proteomes; UP000135609; Genome.
Proteomes; UP000135702; Genome.
Proteomes; UP000135713; Genome.
Proteomes; UP000135804; Genome.
Proteomes; UP000135840; Genome.
Proteomes; UP000135878; Genome.
Proteomes; UP000135912; Genome.
Proteomes; UP000136286; Genome.
Proteomes; UP000136506; Genome.
Proteomes; UP000137076; Genome.
Proteomes; UP000137135; Genome.
Proteomes; UP000137642; Genome.
Proteomes; UP000138117; Genome.
Proteomes; UP000138881; Genome.
Proteomes; UP000139036; Genome.
Proteomes; UP000139218; Genome.
Proteomes; UP000140002; Genome.
Proteomes; UP000140886; Genome.
Proteomes; UP000141497; Genome.
Proteomes; UP000141838; Genome.
Proteomes; UP000141930; Genome.
Proteomes; UP000141975; Genome.
Proteomes; UP000142054; Genome.
Proteomes; UP000142467; Genome.
Proteomes; UP000142735; Genome.
Proteomes; UP000142872; Genome.
Proteomes; UP000142994; Genome.
Proteomes; UP000143145; Genome.
Proteomes; UP000143266; Genome.
Proteomes; UP000145028; Genome.
Proteomes; UP000145713; Genome.
Proteomes; UP000145872; Genome.
Proteomes; UP000145986; Genome.
Proteomes; UP000146202; Genome.
Proteomes; UP000146214; Genome.
Proteomes; UP000146856; Genome.
Proteomes; UP000147164; Genome.
Proteomes; UP000147669; Genome.
Proteomes; UP000148016; Genome.
Proteomes; UP000148048; Genome.
Proteomes; UP000148065; Genome.
Proteomes; UP000148263; Genome.
Proteomes; UP000148798; Genome.
Proteomes; UP000148839; Genome.
Proteomes; UP000148893; Genome.
Proteomes; UP000149058; Genome.
Proteomes; UP000149986; Genome.
Proteomes; UP000150601; Genome.
Proteomes; UP000151163; Genome.
Proteomes; UP000151206; Genome.
Proteomes; UP000151262; Genome.
Proteomes; UP000153081; Genome.
Proteomes; UP000153092; Genome.
Proteomes; UP000153127; Genome.
Proteomes; UP000153418; Genome.
Proteomes; UP000153562; Genome.
Proteomes; UP000153741; Genome.
Proteomes; UP000153753; Genome.
Proteomes; UP000154143; Genome.
Proteomes; UP000154382; Genome.
Proteomes; UP000154578; Genome.
Proteomes; UP000154704; Genome.
Proteomes; UP000154723; Genome.
Proteomes; UP000154811; Genome.
Proteomes; UP000155002; Genome.
Proteomes; UP000155212; Genome.
Proteomes; UP000155241; Genome.
Proteomes; UP000155578; Genome.
Proteomes; UP000155842; Genome.
Proteomes; UP000156035; Genome.
Proteomes; UP000156412; Genome.
Proteomes; UP000158257; Genome.
Proteomes; UP000158262; Genome.
Proteomes; UP000158343; Genome.
Proteomes; UP000158401; Genome.
Proteomes; UP000158498; Genome.
Proteomes; UP000158624; Genome.
Proteomes; UP000158853; Genome.
Proteomes; UP000159218; Genome.
Proteomes; UP000160024; Genome.
Proteomes; UP000160123; Genome.
Proteomes; UP000160238; Genome.
Proteomes; UP000160819; Genome.
Proteomes; UP000161341; Genome.
Proteomes; UP000161506; Genome.
Proteomes; UP000162314; Genome.
Proteomes; UP000163006; Genome.
Proteomes; UP000163267; Genome.
Proteomes; UP000163543; Genome.
Proteomes; UP000163624; Genome.
Proteomes; UP000163819; Genome.
Proteomes; UP000164459; Genome.
Proteomes; UP000164654; Genome.
Proteomes; UP000165932; Genome.
Proteomes; UP000166175; Genome.
Proteomes; UP000166734; Genome.
Proteomes; UP000167803; Genome.
Proteomes; UP000168320; Genome.
Proteomes; UP000168469; Genome.
Proteomes; UP000168944; Genome.
Proteomes; UP000169024; Genome.
Proteomes; UP000169265; Genome.
Proteomes; UP000169341; Genome.
Proteomes; UP000169811; Genome.
Proteomes; UP000169922; Genome.
Proteomes; UP000169926; Genome.
Proteomes; UP000170794; Genome.
Proteomes; UP000170945; Genome.
Proteomes; UP000170995; Genome.
Proteomes; UP000171222; Genome.
Proteomes; UP000171736; Genome.
Proteomes; UP000171879; Genome.
Proteomes; UP000172207; Genome.
Proteomes; UP000172961; Genome.
Proteomes; UP000173775; Genome.
Proteomes; UP000174062; Genome.
Proteomes; UP000174684; Genome.
Proteomes; UP000174771; Genome.
Proteomes; UP000175484; Genome.
GO; GO:0044178; C:host cell Golgi membrane; IEA:UniProtKB-SubCell.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0019031; C:viral envelope; IEA:UniProtKB-KW.
GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
GO; GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
GO; GO:0039660; F:structural constituent of virion; IEA:UniProtKB-KW.
GO; GO:0019058; P:viral life cycle; IEA:InterPro.
InterPro; IPR002574; Corona_M.
Pfam; PF01635; Corona_M; 1.
2: Evidence at transcript level;
Complete proteome {ECO:0000313|Proteomes:UP000096014,
ECO:0000313|Proteomes:UP000096231, ECO:0000313|Proteomes:UP000096250,
ECO:0000313|Proteomes:UP000096695};
Host Golgi apparatus {ECO:0000256|RuleBase:RU363118,
ECO:0000256|SAAS:SAAS00101524};
Host membrane {ECO:0000256|RuleBase:RU363118,
ECO:0000256|SAAS:SAAS00101529};
Membrane {ECO:0000256|RuleBase:RU363118,
ECO:0000256|SAAS:SAAS00101523, ECO:0000256|SAAS:SAAS00101529};
Oxidoreductase {ECO:0000313|EMBL:AFZ85189.1};
Transmembrane {ECO:0000256|RuleBase:RU363118,
ECO:0000256|SAAS:SAAS00101523};
Transmembrane helix {ECO:0000256|RuleBase:RU363118,
ECO:0000256|SAAS:SAAS00101523};
Viral envelope protein {ECO:0000256|RuleBase:RU363118,
ECO:0000256|SAAS:SAAS00101525};
Viral matrix protein {ECO:0000256|RuleBase:RU363118,
ECO:0000256|SAAS:SAAS00101522};
Virion {ECO:0000256|RuleBase:RU363118, ECO:0000256|SAAS:SAAS00101522,
ECO:0000256|SAAS:SAAS00101525}.
TRANSMEM 20 38 Helical. {ECO:0000256|RuleBase:RU363118}.
TRANSMEM 50 69 Helical. {ECO:0000256|RuleBase:RU363118}.
TRANSMEM 75 97 Helical. {ECO:0000256|RuleBase:RU363118}.
SEQUENCE 226 AA; 25363 MW; CA3CB448597B8125 CRC64;
MSNGSIPVDE VIQHLRNWNF TWNIILTILL VVLQYGHYKY SAFLYGVKMA ILWILWPLVL
ALSLFDAWAS FQVNWVFFAF SILMACITLM LWIMYFVNSI RLWRRTHSWW SFNPETDALL
TTSVMGRQVC IPVLGAPTGV TLTLLSGTLL VEGYKVATGV QVSQLPNFVT VAKATTTIVY
GRVGRSVNAS SGTGWAFYVR SKHGDYSAVS NPSSVLTDSE KVLHLV


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