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Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)

 VME1_CVPFS              Reviewed;         262 AA.
P09175;
01-JUL-1989, integrated into UniProtKB/Swiss-Prot.
01-JUL-1989, sequence version 1.
23-MAY-2018, entry version 80.
RecName: Full=Membrane protein {ECO:0000255|HAMAP-Rule:MF_04201};
Short=M protein {ECO:0000255|HAMAP-Rule:MF_04201};
AltName: Full=E1 glycoprotein {ECO:0000255|HAMAP-Rule:MF_04201};
AltName: Full=Matrix glycoprotein {ECO:0000255|HAMAP-Rule:MF_04201};
AltName: Full=Membrane glycoprotein {ECO:0000255|HAMAP-Rule:MF_04201};
Name=M {ECO:0000255|HAMAP-Rule:MF_04201}; ORFNames=5;
Porcine transmissible gastroenteritis coronavirus (strain FS772/70)
(TGEV).
Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage;
Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus.
NCBI_TaxID=11150;
NCBI_TaxID=9823; Sus scrofa (Pig).
[1]
NUCLEOTIDE SEQUENCE [GENOMIC RNA].
PubMed=2845226; DOI=10.1111/j.1365-2958.1988.tb00056.x;
Britton P., Carmenes R.S., Page K.W., Garwes D.J.;
"The integral membrane protein from a virulent isolate of
transmissible gastroenteritis virus: molecular characterization,
sequence and expression in Escherichia coli.";
Mol. Microbiol. 2:497-505(1988).
-!- FUNCTION: Component of the viral envelope that plays a central
role in virus morphogenesis and assembly via its interactions with
other viral proteins. {ECO:0000255|HAMAP-Rule:MF_04201}.
-!- SUBUNIT: Homomultimer. Interacts with envelope E protein in the
budding compartment of the host cell, which is located between
endoplasmic reticulum and the Golgi complex. Forms a complex with
HE and S proteins. Interacts with nucleocapsid N protein. This
interaction probably participates in RNA packaging into the virus.
{ECO:0000255|HAMAP-Rule:MF_04201}.
-!- SUBCELLULAR LOCATION: Virion membrane {ECO:0000255|HAMAP-
Rule:MF_04201}; Multi-pass membrane protein {ECO:0000255|HAMAP-
Rule:MF_04201}. Host Golgi apparatus membrane {ECO:0000255|HAMAP-
Rule:MF_04201}; Multi-pass membrane protein {ECO:0000255|HAMAP-
Rule:MF_04201}. Note=Largely embedded in the lipid bilayer.
{ECO:0000255|HAMAP-Rule:MF_04201}.
-!- SIMILARITY: Belongs to the alphacoronaviruses M protein family.
{ECO:0000255|HAMAP-Rule:MF_04201}.
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EMBL; Y00560; CAA68643.1; -; Genomic_RNA.
PIR; S01914; S01914.
PRIDE; P09175; -.
GO; GO:0044178; C:host cell Golgi membrane; IEA:UniProtKB-SubCell.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0019031; C:viral envelope; IEA:UniProtKB-KW.
GO; GO:0055036; C:virion membrane; IEA:UniProtKB-SubCell.
GO; GO:0039660; F:structural constituent of virion; IEA:UniProtKB-KW.
GO; GO:0019058; P:viral life cycle; IEA:InterPro.
HAMAP; MF_04201; ALPHA_CORONA_M; 1.
InterPro; IPR002574; Corona_M.
Pfam; PF01635; Corona_M; 1.
1: Evidence at protein level;
Glycoprotein; Host Golgi apparatus; Host membrane; Membrane;
Transmembrane; Transmembrane helix; Viral envelope protein;
Viral matrix protein; Virion.
CHAIN 1 262 Membrane protein.
/FTId=PRO_0000037154.
TOPO_DOM 18 47 Virion surface. {ECO:0000255|HAMAP-
Rule:MF_04201}.
TRANSMEM 48 68 Helical. {ECO:0000255|HAMAP-
Rule:MF_04201}.
TOPO_DOM 69 77 Intravirion. {ECO:0000255|HAMAP-
Rule:MF_04201}.
TRANSMEM 78 98 Helical. {ECO:0000255|HAMAP-
Rule:MF_04201}.
TOPO_DOM 99 112 Virion surface. {ECO:0000255|HAMAP-
Rule:MF_04201}.
TRANSMEM 113 133 Helical. {ECO:0000255|HAMAP-
Rule:MF_04201}.
TOPO_DOM 134 262 Intravirion. {ECO:0000255|HAMAP-
Rule:MF_04201}.
REGION 237 252 Interaction with N protein.
{ECO:0000255|HAMAP-Rule:MF_04201}.
CARBOHYD 32 32 N-linked (GlcNAc...) asparagine; by host.
SEQUENCE 262 AA; 29459 MW; 79E3847C6C74671F CRC64;
MKLLLILACV IACACGERYC AMKDDTGLSC RNSTASACES CFNGGDLIWH LANWNFSWSI
ILIIFITVLQ YGRPQFSWFV YGIKMLIMWL LWPIVLALTI FNAYSEYQVS RYVMFGVSIA
GAIVTFVLWI MYFVRSIQLY RRTKSWWSFN PEINAILCVS ALGRSYVLPL EGVPTGVTLT
LLSGNLYAEG FKIAGGMNID NLPKYVMVAL PSRTIVYTLV GKKLKASSAT GWAYYVKSKA
GDYSTDARTD NLSEQEKLLH MV


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