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Methane monooxygenase regulatory protein B

 MMOB_METCA              Reviewed;         141 AA.
P18797; Q609N6; Q9LCT7;
01-NOV-1990, integrated into UniProtKB/Swiss-Prot.
07-DEC-2004, sequence version 2.
25-OCT-2017, entry version 106.
RecName: Full=Methane monooxygenase regulatory protein B;
Name=mmoB; OrderedLocusNames=MCA1196;
Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).
Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales;
Methylococcaceae; Methylococcus.
NCBI_TaxID=243233;
[1]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
STRAIN=ATCC 33009 / NCIMB 11132 / Bath;
PubMed=2505721; DOI=10.1007/BF00456094;
Stainthorpe A.C., Murrell J.C., Salmond G.P.C., Dalton H., Lees V.;
"Molecular analysis of methane monooxygenase from Methylococcus
capsulatus (Bath).";
Arch. Microbiol. 152:154-159(1989).
[2]
NUCLEOTIDE SEQUENCE [GENOMIC DNA].
McDonald I., Murrell J.C.;
Submitted (OCT-1999) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=ATCC 33009 / NCIMB 11132 / Bath;
PubMed=15383840; DOI=10.1371/journal.pbio.0020303;
Ward N.L., Larsen O., Sakwa J., Bruseth L., Khouri H.M., Durkin A.S.,
Dimitrov G., Jiang L., Scanlan D., Kang K.H., Lewis M.R., Nelson K.E.,
Methe B.A., Wu M., Heidelberg J.F., Paulsen I.T., Fouts D.E.,
Ravel J., Tettelin H., Ren Q., Read T.D., DeBoy R.T., Seshadri R.,
Salzberg S.L., Jensen H.B., Birkeland N.K., Nelson W.C., Dodson R.J.,
Grindhaug S.H., Holt I.E., Eidhammer I., Jonasen I., Vanaken S.,
Utterback T.R., Feldblyum T.V., Fraser C.M., Lillehaug J.R.,
Eisen J.A.;
"Genomic insights into methanotrophy: the complete genome sequence of
Methylococcus capsulatus (Bath).";
PLoS Biol. 2:1616-1628(2004).
[4]
IDENTIFICATION OF PROTEIN, AND PROTEIN SEQUENCE OF 3-19.
Pilkington S.J., Salmond G.P.C., Murrell J.C., Dalton H.;
"Identification of the gene encoding the regulatory protein B of
soluble methane monooxygenase.";
FEMS Microbiol. Lett. 72:345-348(1990).
[5]
STRUCTURE BY NMR.
PubMed=10393915; DOI=10.1073/pnas.96.14.7877;
Walters K.J., Gassner G.T., Lippard S.J., Wagner G.;
"Structure of the soluble methane monooxygenase regulatory protein
B.";
Proc. Natl. Acad. Sci. U.S.A. 96:7877-7882(1999).
[6]
CIRCULAR DICHROISM ANALYSIS, AND 3D-STRUCTURE MODELING.
PubMed=10381404; DOI=10.1016/S1074-5521(99)80062-3;
Brandstetter H., Whittington D.A., Lippard S.J., Frederick C.A.;
"Mutational and structural analyses of the regulatory protein B of
soluble methane monooxygenase from Methylococcus capsulatus (Bath).";
Chem. Biol. 6:441-449(1999).
-!- FUNCTION: The B protein acts as a regulator of electron flow
through the soluble mmo complex, switching the enzyme from an
oxidase to a hydroxylase in the presence of the substrate.
-!- SUBUNIT: The soluble methane monooxygenase (sMMO) consists of four
components A/MMOH (composed of alpha/MmoX, beta/MmoY and
gamma/MmoZ), B/MMOB (MmoB), C/MMOR (MmoC) and D/MMOD (MmoD).
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EMBL; M90050; AAF04158.2; -; Genomic_DNA.
EMBL; AE017282; AAU92726.1; -; Genomic_DNA.
PIR; JL0103; JL0103.
RefSeq; WP_010960484.1; NC_002977.6.
PDB; 1CKV; NMR; -; A=1-141.
PDB; 4GAM; X-ray; 2.90 A; D/I/N/S=1-141.
PDBsum; 1CKV; -.
PDBsum; 4GAM; -.
ProteinModelPortal; P18797; -.
SMR; P18797; -.
DIP; DIP-60130N; -.
IntAct; P18797; 1.
STRING; 243233.MCA1196; -.
EnsemblBacteria; AAU92726; AAU92726; MCA1196.
KEGG; mca:MCA1196; -.
eggNOG; ENOG410666X; Bacteria.
eggNOG; ENOG4112AQ4; LUCA.
HOGENOM; HOG000086316; -.
KO; K16160; -.
OMA; ITSELMG; -.
OrthoDB; POG091H10UL; -.
BioCyc; MetaCyc:MONOMER-3865; -.
EvolutionaryTrace; P18797; -.
Proteomes; UP000006821; Chromosome.
GO; GO:0015050; C:methane monooxygenase complex; ISS:JCVI.
GO; GO:0015049; F:methane monooxygenase activity; ISS:JCVI.
GO; GO:0006725; P:cellular aromatic compound metabolic process; IEA:InterPro.
GO; GO:0015947; P:methane metabolic process; ISS:JCVI.
GO; GO:0055114; P:oxidation-reduction process; ISS:JCVI.
Gene3D; 3.90.56.10; -; 1.
InterPro; IPR003454; mOase_MmoB_DmpM.
InterPro; IPR036889; mOase_MmoB_DmpM_sf.
Pfam; PF02406; MmoB_DmpM; 1.
SUPFAM; SSF56029; SSF56029; 1.
1: Evidence at protein level;
3D-structure; Complete proteome; Direct protein sequencing;
Monooxygenase; Oxidoreductase; Reference proteome.
CHAIN 1 141 Methane monooxygenase regulatory protein
B.
/FTId=PRO_0000096507.
CONFLICT 12 12 I -> F (in Ref. 1 and 4). {ECO:0000305}.
STRAND 4 7 {ECO:0000244|PDB:4GAM}.
TURN 11 14 {ECO:0000244|PDB:4GAM}.
HELIX 18 25 {ECO:0000244|PDB:4GAM}.
HELIX 28 30 {ECO:0000244|PDB:4GAM}.
STRAND 37 43 {ECO:0000244|PDB:4GAM}.
HELIX 46 54 {ECO:0000244|PDB:4GAM}.
TURN 55 58 {ECO:0000244|PDB:4GAM}.
HELIX 59 63 {ECO:0000244|PDB:4GAM}.
STRAND 69 72 {ECO:0000244|PDB:4GAM}.
STRAND 74 88 {ECO:0000244|PDB:4GAM}.
HELIX 89 96 {ECO:0000244|PDB:4GAM}.
HELIX 102 105 {ECO:0000244|PDB:4GAM}.
STRAND 108 128 {ECO:0000244|PDB:4GAM}.
TURN 130 132 {ECO:0000244|PDB:4GAM}.
SEQUENCE 141 AA; 15984 MW; 86A1496846C5840F CRC64;
MSVNSNAYDA GIMGLKGKDF ADQFFADENQ VVHESDTVVL VLKKSDEINT FIEEILLTDY
KKNVNPTVNV EDRAGYWWIK ANGKIEVDCD EISELLGRQF NVYDFLVDVS STIGRAYTLG
NKFTITSELM GLDRKLEDYH A


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