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Multidrug and toxin extrusion protein 1 (MATE-1) (hMATE-1) (Solute carrier family 47 member 1)

 S47A1_HUMAN             Reviewed;         570 AA.
Q96FL8; Q53HF5; Q6PD77; Q86VL4; Q9NVA3;
04-DEC-2007, integrated into UniProtKB/Swiss-Prot.
01-DEC-2001, sequence version 1.
18-JUL-2018, entry version 129.
RecName: Full=Multidrug and toxin extrusion protein 1;
Short=MATE-1;
Short=hMATE-1;
AltName: Full=Solute carrier family 47 member 1;
Name=SLC47A1; Synonyms=MATE1;
Homo sapiens (Human).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
NCBI_TaxID=9606;
[1]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
PubMed=14702039; DOI=10.1038/ng1285;
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A.,
Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M.,
Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y.,
Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M.,
Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K.,
Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S.,
Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J.,
Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y.,
Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N.,
Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S.,
Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y.,
Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T.,
Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y.,
Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S.,
Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T.,
Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M.,
Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T.,
Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K.,
Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R.,
Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
"Complete sequencing and characterization of 21,243 full-length human
cDNAs.";
Nat. Genet. 36:40-45(2004).
[2]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
TISSUE=Cerebellum;
Suzuki Y., Sugano S., Totoki Y., Toyoda A., Takeda T., Sakaki Y.,
Tanaka A., Yokoyama S.;
Submitted (APR-2005) to the EMBL/GenBank/DDBJ databases.
[3]
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
Venter J.C.;
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
[4]
NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1; 2 AND 3).
TISSUE=Colon, and Eye;
PubMed=15489334; DOI=10.1101/gr.2596504;
The MGC Project Team;
"The status, quality, and expansion of the NIH full-length cDNA
project: the Mammalian Gene Collection (MGC).";
Genome Res. 14:2121-2127(2004).
[5]
FUNCTION, MUTAGENESIS OF GLU-273, TISSUE SPECIFICITY, SUBCELLULAR
LOCATION, AND BIOPHYSICOCHEMICAL PROPERTIES.
PubMed=16330770; DOI=10.1073/pnas.0506483102;
Otsuka M., Matsumoto T., Morimoto R., Arioka S., Omote H.,
Moriyama Y.;
"A human transporter protein that mediates the final excretion step
for toxic organic cations.";
Proc. Natl. Acad. Sci. U.S.A. 102:17923-17928(2005).
[6]
SUBCELLULAR LOCATION.
PubMed=16641166; DOI=10.1152/ajpcell.00090.2006;
Hiasa M., Matsumoto T., Komatsu T., Moriyama Y.;
"Wide variety of locations for rodent MATE1, a transporter protein
that mediates the final excretion step for toxic organic cations.";
Am. J. Physiol. 291:C678-C686(2006).
[7]
FUNCTION.
PubMed=16996621; DOI=10.1016/j.tips.2006.09.001;
Omote H., Hiasa M., Matsumoto T., Otsuka M., Moriyama Y.;
"The MATE proteins as fundamental transporters of metabolic and
xenobiotic organic cations.";
Trends Pharmacol. Sci. 27:587-593(2006).
[8]
FUNCTION, BIOPHYSICOCHEMICAL PROPERTIES, AND TISSUE SPECIFICITY.
PubMed=17509534; DOI=10.1016/j.bcp.2007.04.010;
Tanihara Y., Masuda S., Sato T., Katsura T., Ogawa O., Inui K.;
"Substrate specificity of MATE1 and MATE2-K, human multidrug and toxin
extrusions/H(+)-organic cation antiporters.";
Biochem. Pharmacol. 74:359-371(2007).
[9]
FUNCTION.
PubMed=17582384; DOI=10.1016/j.bcp.2007.03.004;
Yokoo S., Yonezawa A., Masuda S., Fukatsu A., Katsura T., Inui K.;
"Differential contribution of organic cation transporters, OCT2 and
MATE1, in platinum agent-induced nephrotoxicity.";
Biochem. Pharmacol. 74:477-487(2007).
[10]
FUNCTION.
PubMed=17495125; DOI=10.1124/jpet.107.123554;
Chen Y., Zhang S., Sorani M., Giacomini K.M.;
"Transport of paraquat by human organic cation transporters and
multidrug and toxic compound extrusion family.";
J. Pharmacol. Exp. Ther. 322:695-700(2007).
[11]
ACETYLATION [LARGE SCALE ANALYSIS] AT MET-1, AND IDENTIFICATION BY
MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
PubMed=22814378; DOI=10.1073/pnas.1210303109;
Van Damme P., Lasa M., Polevoda B., Gazquez C., Elosegui-Artola A.,
Kim D.S., De Juan-Pardo E., Demeyer K., Hole K., Larrea E.,
Timmerman E., Prieto J., Arnesen T., Sherman F., Gevaert K.,
Aldabe R.;
"N-terminal acetylome analyses and functional insights of the N-
terminal acetyltransferase NatB.";
Proc. Natl. Acad. Sci. U.S.A. 109:12449-12454(2012).
-!- FUNCTION: Solute transporter for tetraethylammonium (TEA), 1-
methyl-4-phenylpyridinium (MPP), cimetidine, N-methylnicotinamide
(NMN), metformin, creatinine, guanidine, procainamide, topotecan,
estrone sulfate, acyclovir, ganciclovir and also the zwitterionic
cephalosporin, cephalexin and cephradin. Seems to also play a role
in the uptake of oxaliplatin (a new platinum anticancer agent).
Able to transport paraquat (PQ or N,N-dimethyl-4-4'-bipiridinium);
a widely used herbicid. Responsible for the secretion of cationic
drugs across the brush border membranes.
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:16996621,
ECO:0000269|PubMed:17495125, ECO:0000269|PubMed:17509534,
ECO:0000269|PubMed:17582384}.
-!- BIOPHYSICOCHEMICAL PROPERTIES:
Kinetic parameters:
KM=0.38 mM for TEA {ECO:0000269|PubMed:16330770,
ECO:0000269|PubMed:17509534};
KM=0.10 mM for MPP {ECO:0000269|PubMed:16330770,
ECO:0000269|PubMed:17509534};
KM=0.17 mM for cimetidine {ECO:0000269|PubMed:16330770,
ECO:0000269|PubMed:17509534};
KM=0.78 mM for metformin {ECO:0000269|PubMed:16330770,
ECO:0000269|PubMed:17509534};
KM=2.1 mM for guanidine {ECO:0000269|PubMed:16330770,
ECO:0000269|PubMed:17509534};
KM=1.23 mM for procainamide {ECO:0000269|PubMed:16330770,
ECO:0000269|PubMed:17509534};
KM=0.07 mM for topotecan {ECO:0000269|PubMed:16330770,
ECO:0000269|PubMed:17509534};
KM=0.47 mM for estrone sulfate {ECO:0000269|PubMed:16330770,
ECO:0000269|PubMed:17509534};
KM=2.64 mM for acyclovir {ECO:0000269|PubMed:16330770,
ECO:0000269|PubMed:17509534};
KM=5.12 mM for ganciclovir {ECO:0000269|PubMed:16330770,
ECO:0000269|PubMed:17509534};
Vmax=1.185 nmol/min/mg enzyme toward TEA
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:17509534};
Vmax=0.735 nmol/min/mg enzyme toward MPP
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:17509534};
Vmax=0.135 nmol/min/mg enzyme toward cimetidine
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:17509534};
Vmax=2.23 nmol/min/mg enzyme toward metformin
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:17509534};
Vmax=0.89 nmol/min/mg enzyme toward guanidine
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:17509534};
Vmax=3.78 nmol/min/mg enzyme toward procainamide
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:17509534};
Vmax=0.21 nmol/min/mg enzyme toward topotecan
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:17509534};
Vmax=0.265 nmol/min/mg enzyme toward estrone sulfate
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:17509534};
Vmax=0.62 nmol/min/mg enzyme toward acyclovir
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:17509534};
Vmax=1.08 nmol/min/mg enzyme toward ganciclovir
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:17509534};
pH dependence:
Optimum pH is 8.5. Active from pH 6 to 8.5.
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:17509534};
-!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000269|PubMed:16330770,
ECO:0000269|PubMed:16641166}; Multi-pass membrane protein
{ECO:0000269|PubMed:16330770, ECO:0000269|PubMed:16641166}.
Note=Predominantly localized at the plasma membrane but also found
in intracellular organelles.
-!- ALTERNATIVE PRODUCTS:
Event=Alternative splicing; Named isoforms=3;
Name=1;
IsoId=Q96FL8-1; Sequence=Displayed;
Name=2;
IsoId=Q96FL8-2; Sequence=VSP_029903, VSP_029904;
Note=No experimental confirmation available.;
Name=3;
IsoId=Q96FL8-3; Sequence=VSP_029905;
Note=No experimental confirmation available.;
-!- TISSUE SPECIFICITY: Expressed in adrenal gland, and to a lower
extent in liver, skeletal muscle and kidney (especially found in
luminal membranes of the urinary tubules, bile caniculi and brush
border membranes). {ECO:0000269|PubMed:16330770,
ECO:0000269|PubMed:17509534}.
-!- SIMILARITY: Belongs to the multi antimicrobial extrusion (MATE)
(TC 2.A.66.1) family. {ECO:0000305}.
-!- SEQUENCE CAUTION:
Sequence=AAH50592.1; Type=Erroneous initiation; Evidence={ECO:0000305};
-----------------------------------------------------------------------
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EMBL; AK001709; BAA91852.1; -; mRNA.
EMBL; AK222625; BAD96345.1; -; mRNA.
EMBL; CH471212; EAW50893.1; -; Genomic_DNA.
EMBL; CH471212; EAW50894.1; -; Genomic_DNA.
EMBL; BC010661; AAH10661.1; -; mRNA.
EMBL; BC050592; AAH50592.1; ALT_INIT; mRNA.
EMBL; BC058882; AAH58882.1; -; mRNA.
CCDS; CCDS11209.1; -. [Q96FL8-1]
RefSeq; NP_060712.2; NM_018242.2. [Q96FL8-1]
UniGene; Hs.232054; -.
ProteinModelPortal; Q96FL8; -.
BioGrid; 120535; 42.
IntAct; Q96FL8; 1.
STRING; 9606.ENSP00000270570; -.
BindingDB; Q96FL8; -.
ChEMBL; CHEMBL1743126; -.
DrugBank; DB00787; Aciclovir.
DrugBank; DB01237; Bromodiphenhydramine.
DrugBank; DB00567; Cephalexin.
DrugBank; DB00501; Cimetidine.
DrugBank; DB00331; Metformin.
DrugBank; DB00877; Sirolimus.
GuidetoPHARMACOLOGY; 1216; -.
TCDB; 2.A.66.1.14; the multidrug/oligosaccharidyl-lipid/polysaccharide (mop) flippase superfamily.
iPTMnet; Q96FL8; -.
PhosphoSitePlus; Q96FL8; -.
BioMuta; SLC47A1; -.
DMDM; 74731723; -.
MaxQB; Q96FL8; -.
PaxDb; Q96FL8; -.
PeptideAtlas; Q96FL8; -.
PRIDE; Q96FL8; -.
ProteomicsDB; 76538; -.
ProteomicsDB; 76539; -. [Q96FL8-2]
ProteomicsDB; 76540; -. [Q96FL8-3]
Ensembl; ENST00000270570; ENSP00000270570; ENSG00000142494. [Q96FL8-1]
Ensembl; ENST00000395585; ENSP00000378951; ENSG00000142494. [Q96FL8-3]
GeneID; 55244; -.
KEGG; hsa:55244; -.
UCSC; uc002gvx.4; human. [Q96FL8-1]
CTD; 55244; -.
DisGeNET; 55244; -.
EuPathDB; HostDB:ENSG00000142494.13; -.
GeneCards; SLC47A1; -.
H-InvDB; HIX0013619; -.
HGNC; HGNC:25588; SLC47A1.
HPA; HPA021987; -.
MIM; 609832; gene.
neXtProt; NX_Q96FL8; -.
OpenTargets; ENSG00000142494; -.
PharmGKB; PA162403808; -.
eggNOG; KOG1347; Eukaryota.
eggNOG; COG0534; LUCA.
GeneTree; ENSGT00390000015713; -.
HOGENOM; HOG000060313; -.
HOVERGEN; HBG056043; -.
InParanoid; Q96FL8; -.
KO; K03327; -.
OMA; LCMEWWA; -.
OrthoDB; EOG091G06X2; -.
PhylomeDB; Q96FL8; -.
TreeFam; TF324441; -.
Reactome; R-HSA-425366; Transport of bile salts and organic acids, metal ions and amine compounds.
ChiTaRS; SLC47A1; human.
GeneWiki; SLC47A1; -.
GenomeRNAi; 55244; -.
PRO; PR:Q96FL8; -.
Proteomes; UP000005640; Chromosome 17.
Bgee; ENSG00000142494; -.
CleanEx; HS_SLC47A1; -.
ExpressionAtlas; Q96FL8; baseline and differential.
Genevisible; Q96FL8; HS.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005886; C:plasma membrane; TAS:Reactome.
GO; GO:0031982; C:vesicle; IBA:GO_Central.
GO; GO:0015238; F:drug transmembrane transporter activity; IBA:GO_Central.
GO; GO:0015307; F:drug:proton antiporter activity; TAS:Reactome.
GO; GO:0005451; F:monovalent cation:proton antiporter activity; IBA:GO_Central.
GO; GO:0006855; P:drug transmembrane transport; IBA:GO_Central.
GO; GO:0015695; P:organic cation transport; IBA:GO_Central.
GO; GO:0055085; P:transmembrane transport; TAS:Reactome.
InterPro; IPR002528; MATE_fam.
Pfam; PF01554; MatE; 2.
TIGRFAMs; TIGR00797; matE; 1.
1: Evidence at protein level;
Acetylation; Alternative splicing; Cell membrane; Complete proteome;
Membrane; Polymorphism; Reference proteome; Transmembrane;
Transmembrane helix; Transport.
CHAIN 1 570 Multidrug and toxin extrusion protein 1.
/FTId=PRO_0000312845.
TOPO_DOM 1 37 Cytoplasmic. {ECO:0000255}.
TRANSMEM 38 58 Helical. {ECO:0000255}.
TOPO_DOM 59 72 Extracellular. {ECO:0000255}.
TRANSMEM 73 93 Helical. {ECO:0000255}.
TOPO_DOM 94 123 Cytoplasmic. {ECO:0000255}.
TRANSMEM 124 144 Helical. {ECO:0000255}.
TOPO_DOM 145 152 Extracellular. {ECO:0000255}.
TRANSMEM 153 173 Helical. {ECO:0000255}.
TOPO_DOM 174 176 Cytoplasmic. {ECO:0000255}.
TRANSMEM 177 197 Helical. {ECO:0000255}.
TOPO_DOM 198 216 Extracellular. {ECO:0000255}.
TRANSMEM 217 237 Helical. {ECO:0000255}.
TOPO_DOM 238 256 Cytoplasmic. {ECO:0000255}.
TRANSMEM 257 276 Helical. {ECO:0000255}.
TOPO_DOM 277 295 Extracellular. {ECO:0000255}.
TRANSMEM 296 316 Helical. {ECO:0000255}.
TOPO_DOM 317 336 Cytoplasmic. {ECO:0000255}.
TRANSMEM 337 357 Helical. {ECO:0000255}.
TOPO_DOM 358 370 Extracellular. {ECO:0000255}.
TRANSMEM 371 391 Helical. {ECO:0000255}.
TOPO_DOM 392 408 Cytoplasmic. {ECO:0000255}.
TRANSMEM 409 429 Helical. {ECO:0000255}.
TOPO_DOM 430 437 Extracellular. {ECO:0000255}.
TRANSMEM 438 458 Helical. {ECO:0000255}.
TOPO_DOM 459 546 Cytoplasmic. {ECO:0000255}.
TRANSMEM 547 567 Helical. {ECO:0000255}.
TOPO_DOM 568 570 Extracellular. {ECO:0000255}.
MOD_RES 1 1 N-acetylmethionine.
{ECO:0000244|PubMed:22814378}.
VAR_SEQ 286 290 ILGMV -> LYEDG (in isoform 2).
{ECO:0000303|PubMed:15489334}.
/FTId=VSP_029903.
VAR_SEQ 291 570 Missing (in isoform 2).
{ECO:0000303|PubMed:15489334}.
/FTId=VSP_029904.
VAR_SEQ 559 570 VGILVRFYVRIQ -> AGVRWCDHSSLQPRTLGLQAILLCQ
PPE (in isoform 3).
{ECO:0000303|PubMed:15489334}.
/FTId=VSP_029905.
VARIANT 338 338 V -> I (in dbSNP:rs35790011).
/FTId=VAR_037587.
MUTAGEN 273 273 E->Q: No change in subcellular location
and abolition of MATE1-dependent TEA
transport activity.
{ECO:0000269|PubMed:16330770}.
CONFLICT 50 50 L -> R (in Ref. 2; BAD96345).
{ECO:0000305}.
CONFLICT 309 309 P -> L (in Ref. 1; BAA91852).
{ECO:0000305}.
CONFLICT 448 448 F -> L (in Ref. 2; BAD96345).
{ECO:0000305}.
CONFLICT 507 507 N -> D (in Ref. 2; BAD96345).
{ECO:0000305}.
SEQUENCE 570 AA; 61922 MW; CA940CBC2F6F5CC4 CRC64;
MEAPEEPAPV RGGPEATLEV RGSRCLRLSA FREELRALLV LAGPAFLVQL MVFLISFISS
VFCGHLGKLE LDAVTLAIAV INVTGVSVGF GLSSACDTLI SQTYGSQNLK HVGVILQRSA
LVLLLCCFPC WALFLNTQHI LLLFRQDPDV SRLTQTYVTI FIPALPATFL YMLQVKYLLN
QGIVLPQIVT GVAANLVNAL ANYLFLHQLH LGVIGSALAN LISQYTLALL LFLYILGKKL
HQATWGGWSL ECLQDWASFL RLAIPSMLML CMEWWAYEVG SFLSGILGMV ELGAQSIVYE
LAIIVYMVPA GFSVAASVRV GNALGAGDME QARKSSTVSL LITVLFAVAF SVLLLSCKDH
VGYIFTTDRD IINLVAQVVP IYAVSHLFEA LACTSGGVLR GSGNQKVGAI VNTIGYYVVG
LPIGIALMFA TTLGVMGLWS GIIICTVFQA VCFLGFIIQL NWKKACQQAQ VHANLKVNNV
PRSGNSALPQ DPLHPGCPEN LEGILTNDVG KTGEPQSDQQ MRQEEPLPEH PQDGAKLSRK
QLVLRRGLLL LGVFLILLVG ILVRFYVRIQ


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