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NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (Fragment)

 Q09SP0_9SALA            Unreviewed;       217 AA.
Q09SP0;
17-OCT-2006, integrated into UniProtKB/TrEMBL.
17-OCT-2006, sequence version 1.
05-JUL-2017, entry version 34.
RecName: Full=NADH-ubiquinone oxidoreductase chain 4 {ECO:0000256|RuleBase:RU003297};
EC=1.6.5.3 {ECO:0000256|RuleBase:RU003297};
Flags: Fragment;
Name=nad4 {ECO:0000313|EMBL:ABF46939.1};
Synonyms=ND4 {ECO:0000313|EMBL:ALD83018.1};
Lissotriton boscai (Bosca's newt).
Mitochondrion {ECO:0000313|EMBL:ABF46939.1}.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Amphibia; Batrachia; Caudata; Salamandroidea; Salamandridae;
Pleurodelinae; Lissotriton.
NCBI_TaxID=323757 {ECO:0000313|EMBL:ABF46939.1};
[1] {ECO:0000313|EMBL:ABF46939.1}
NUCLEOTIDE SEQUENCE.
STRAIN=4_100 {ECO:0000313|EMBL:ABF46936.1},
4_101 {ECO:0000313|EMBL:ABF46937.1},
4_102 {ECO:0000313|EMBL:ABF46938.1},
4_103 {ECO:0000313|EMBL:ABF46939.1},
4_28 {ECO:0000313|EMBL:ABF46864.1},
4_32 {ECO:0000313|EMBL:ABF46868.1},
4_34 {ECO:0000313|EMBL:ABF46870.1},
4_59 {ECO:0000313|EMBL:ABF46895.1},
4_60 {ECO:0000313|EMBL:ABF46896.1},
4_62 {ECO:0000313|EMBL:ABF46898.1},
4_63 {ECO:0000313|EMBL:ABF46899.1},
4_64 {ECO:0000313|EMBL:ABF46900.1},
4_65 {ECO:0000313|EMBL:ABF46901.1},
4_66 {ECO:0000313|EMBL:ABF46902.1},
4_67 {ECO:0000313|EMBL:ABF46903.1},
4_68 {ECO:0000313|EMBL:ABF46904.1},
4_69 {ECO:0000313|EMBL:ABF46905.1},
4_70 {ECO:0000313|EMBL:ABF46906.1},
4_71 {ECO:0000313|EMBL:ABF46907.1},
4_72 {ECO:0000313|EMBL:ABF46908.1},
4_73 {ECO:0000313|EMBL:ABF46909.1},
4_74 {ECO:0000313|EMBL:ABF46910.1},
4_75 {ECO:0000313|EMBL:ABF46911.1},
4_76 {ECO:0000313|EMBL:ABF46912.1},
4_77 {ECO:0000313|EMBL:ABF46913.1},
4_78 {ECO:0000313|EMBL:ABF46914.1},
4_79 {ECO:0000313|EMBL:ABF46915.1},
4_80 {ECO:0000313|EMBL:ABF46916.1},
4_81 {ECO:0000313|EMBL:ABF46917.1}, and
4_82 {ECO:0000313|EMBL:ABF46918.1};
PubMed=16968276; DOI=10.1111/j.1365-294X.2006.03013.x;
Martinez-Solano I., Teixeira J., Buckley D., Garcia-Paris M.;
"Mitochondrial DNA phylogeography of Lissotriton boscai (Caudata,
Salamandridae): evidence for old, multiple refugia in an Iberian
endemic.";
Mol. Ecol. 15:3375-3388(2006).
[2] {ECO:0000313|EMBL:ALD83018.1}
NUCLEOTIDE SEQUENCE.
STRAIN=FERM1 {ECO:0000313|EMBL:ALD83029.1},
FERM2 {ECO:0000313|EMBL:ALD83030.1},
MIRA1 {ECO:0000313|EMBL:ALD83027.1},
MIRA3 {ECO:0000313|EMBL:ALD83028.1}, and
SEGU1 {ECO:0000313|EMBL:ALD83018.1};
Teixeira J., Martinez-Solano I., Buckley D., Tarroso P.,
Garcia Paris M., Ferrand N.;
"Genealogy of the nuclear beta-fibrinogen intron 7 in Lissotriton
boscai (Caudata, Salamandridae): concordance with mtDNA and
implications for phylogeography and speciation.";
Contrib. Zool. 84:193-215(2015).
[3] {ECO:0000313|EMBL:ARN62403.1}
NUCLEOTIDE SEQUENCE.
STRAIN=LB_1 {ECO:0000313|EMBL:ARN62419.1},
LB_10 {ECO:0000313|EMBL:ARN62440.1},
LB_11 {ECO:0000313|EMBL:ARN62441.1},
LB_12 {ECO:0000313|EMBL:ARN62442.1},
LB_13 {ECO:0000313|EMBL:ARN62431.1},
LB_15 {ECO:0000313|EMBL:ARN62435.1},
LB_17 {ECO:0000313|EMBL:ARN62437.1},
LB_19 {ECO:0000313|EMBL:ARN62443.1},
LB_2 {ECO:0000313|EMBL:ARN62420.1},
LB_20 {ECO:0000313|EMBL:ARN62444.1},
LB_22 {ECO:0000313|EMBL:ARN62445.1},
LB_23 {ECO:0000313|EMBL:ARN62433.1},
LB_24 {ECO:0000313|EMBL:ARN62434.1},
LB_3 {ECO:0000313|EMBL:ARN62421.1},
LB_33 {ECO:0000313|EMBL:ARN62427.1},
LB_34 {ECO:0000313|EMBL:ARN62428.1},
LB_35 {ECO:0000313|EMBL:ARN62429.1},
LB_36 {ECO:0000313|EMBL:ARN62430.1},
LB_4 {ECO:0000313|EMBL:ARN62422.1},
LB_49 {ECO:0000313|EMBL:ARN62407.1},
LB_5 {ECO:0000313|EMBL:ARN62423.1},
LB_50 {ECO:0000313|EMBL:ARN62408.1},
LB_51 {ECO:0000313|EMBL:ARN62409.1},
LB_52 {ECO:0000313|EMBL:ARN62410.1},
LB_53 {ECO:0000313|EMBL:ARN62411.1},
LB_54 {ECO:0000313|EMBL:ARN62412.1},
LB_55 {ECO:0000313|EMBL:ARN62413.1},
LB_56 {ECO:0000313|EMBL:ARN62414.1},
LB_57 {ECO:0000313|EMBL:ARN62403.1},
LB_59 {ECO:0000313|EMBL:ARN62405.1},
LB_6 {ECO:0000313|EMBL:ARN62424.1},
LB_60 {ECO:0000313|EMBL:ARN62406.1},
LB_69 {ECO:0000313|EMBL:ARN62415.1},
LB_7 {ECO:0000313|EMBL:ARN62425.1},
LB_71 {ECO:0000313|EMBL:ARN62417.1},
LB_72 {ECO:0000313|EMBL:ARN62418.1},
LB_8 {ECO:0000313|EMBL:ARN62426.1}, and
LB_9 {ECO:0000313|EMBL:ARN62439.1};
Penalver-Alcazar M., Martinez-Solano I., Sequeira F., Aragon P.;
"Sex-dependent implications of primary productivity and conspecific
density on geographical body size variation in a newt: disentangling
local, large scale and genetic factors.";
J. Biogeogr. 0:0-0(2017).
-!- CATALYTIC ACTIVITY: NADH + ubiquinone + 5 H(+)(In) = NAD(+) +
ubiquinol + 4 H(+)(Out). {ECO:0000256|RuleBase:RU003297}.
-!- SIMILARITY: Belongs to the complex I subunit 4 family.
{ECO:0000256|RuleBase:RU003297}.
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EMBL; DQ491764; ABF46864.1; -; Genomic_DNA.
EMBL; DQ491768; ABF46868.1; -; Genomic_DNA.
EMBL; DQ491770; ABF46870.1; -; Genomic_DNA.
EMBL; DQ491795; ABF46895.1; -; Genomic_DNA.
EMBL; DQ491796; ABF46896.1; -; Genomic_DNA.
EMBL; DQ491798; ABF46898.1; -; Genomic_DNA.
EMBL; DQ491799; ABF46899.1; -; Genomic_DNA.
EMBL; DQ491800; ABF46900.1; -; Genomic_DNA.
EMBL; DQ491801; ABF46901.1; -; Genomic_DNA.
EMBL; DQ491802; ABF46902.1; -; Genomic_DNA.
EMBL; DQ491803; ABF46903.1; -; Genomic_DNA.
EMBL; DQ491804; ABF46904.1; -; Genomic_DNA.
EMBL; DQ491805; ABF46905.1; -; Genomic_DNA.
EMBL; DQ491806; ABF46906.1; -; Genomic_DNA.
EMBL; DQ491807; ABF46907.1; -; Genomic_DNA.
EMBL; DQ491808; ABF46908.1; -; Genomic_DNA.
EMBL; DQ491809; ABF46909.1; -; Genomic_DNA.
EMBL; DQ491810; ABF46910.1; -; Genomic_DNA.
EMBL; DQ491811; ABF46911.1; -; Genomic_DNA.
EMBL; DQ491812; ABF46912.1; -; Genomic_DNA.
EMBL; DQ491813; ABF46913.1; -; Genomic_DNA.
EMBL; DQ491814; ABF46914.1; -; Genomic_DNA.
EMBL; DQ491815; ABF46915.1; -; Genomic_DNA.
EMBL; DQ491816; ABF46916.1; -; Genomic_DNA.
EMBL; DQ491817; ABF46917.1; -; Genomic_DNA.
EMBL; DQ491818; ABF46918.1; -; Genomic_DNA.
EMBL; DQ491836; ABF46936.1; -; Genomic_DNA.
EMBL; DQ491837; ABF46937.1; -; Genomic_DNA.
EMBL; DQ491838; ABF46938.1; -; Genomic_DNA.
EMBL; DQ491839; ABF46939.1; -; Genomic_DNA.
EMBL; KP266309; ALD83018.1; -; Genomic_DNA.
EMBL; KP266318; ALD83027.1; -; Genomic_DNA.
EMBL; KP266319; ALD83028.1; -; Genomic_DNA.
EMBL; KP266320; ALD83029.1; -; Genomic_DNA.
EMBL; KP266321; ALD83030.1; -; Genomic_DNA.
EMBL; KY001998; ARN62403.1; -; Genomic_DNA.
EMBL; KY002000; ARN62405.1; -; Genomic_DNA.
EMBL; KY002001; ARN62406.1; -; Genomic_DNA.
EMBL; KY002002; ARN62407.1; -; Genomic_DNA.
EMBL; KY002003; ARN62408.1; -; Genomic_DNA.
EMBL; KY002004; ARN62409.1; -; Genomic_DNA.
EMBL; KY002005; ARN62410.1; -; Genomic_DNA.
EMBL; KY002006; ARN62411.1; -; Genomic_DNA.
EMBL; KY002007; ARN62412.1; -; Genomic_DNA.
EMBL; KY002008; ARN62413.1; -; Genomic_DNA.
EMBL; KY002009; ARN62414.1; -; Genomic_DNA.
EMBL; KY002010; ARN62415.1; -; Genomic_DNA.
EMBL; KY002012; ARN62417.1; -; Genomic_DNA.
EMBL; KY002013; ARN62418.1; -; Genomic_DNA.
EMBL; KY002014; ARN62419.1; -; Genomic_DNA.
EMBL; KY002015; ARN62420.1; -; Genomic_DNA.
EMBL; KY002016; ARN62421.1; -; Genomic_DNA.
EMBL; KY002017; ARN62422.1; -; Genomic_DNA.
EMBL; KY002018; ARN62423.1; -; Genomic_DNA.
EMBL; KY002019; ARN62424.1; -; Genomic_DNA.
EMBL; KY002020; ARN62425.1; -; Genomic_DNA.
EMBL; KY002021; ARN62426.1; -; Genomic_DNA.
EMBL; KY002022; ARN62427.1; -; Genomic_DNA.
EMBL; KY002023; ARN62428.1; -; Genomic_DNA.
EMBL; KY002024; ARN62429.1; -; Genomic_DNA.
EMBL; KY002025; ARN62430.1; -; Genomic_DNA.
EMBL; KY002026; ARN62431.1; -; Genomic_DNA.
EMBL; KY002028; ARN62433.1; -; Genomic_DNA.
EMBL; KY002029; ARN62434.1; -; Genomic_DNA.
EMBL; KY002030; ARN62435.1; -; Genomic_DNA.
EMBL; KY002032; ARN62437.1; -; Genomic_DNA.
EMBL; KY002034; ARN62439.1; -; Genomic_DNA.
EMBL; KY002035; ARN62440.1; -; Genomic_DNA.
EMBL; KY002036; ARN62441.1; -; Genomic_DNA.
EMBL; KY002037; ARN62442.1; -; Genomic_DNA.
EMBL; KY002038; ARN62443.1; -; Genomic_DNA.
EMBL; KY002039; ARN62444.1; -; Genomic_DNA.
EMBL; KY002040; ARN62445.1; -; Genomic_DNA.
HOVERGEN; HBG093667; -.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-KW.
GO; GO:0008137; F:NADH dehydrogenase (ubiquinone) activity; IEA:UniProtKB-EC.
GO; GO:0042773; P:ATP synthesis coupled electron transport; IEA:InterPro.
InterPro; IPR003918; NADH_UbQ_OxRdtase.
InterPro; IPR001750; ND/Mrp_mem.
PANTHER; PTHR43507; PTHR43507; 1.
Pfam; PF00361; Proton_antipo_M; 1.
PRINTS; PR01437; NUOXDRDTASE4.
3: Inferred from homology;
Membrane {ECO:0000256|SAM:Phobius};
Mitochondrion {ECO:0000256|RuleBase:RU003297,
ECO:0000313|EMBL:ABF46939.1}; NAD {ECO:0000256|RuleBase:RU003297};
Oxidoreductase {ECO:0000256|RuleBase:RU003297};
Transmembrane {ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAM:Phobius};
Ubiquinone {ECO:0000256|RuleBase:RU003297}.
TRANSMEM 15 34 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 43 61 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 67 88 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 100 120 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 149 172 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 193 216 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 2 161 Proton_antipo_M.
{ECO:0000259|Pfam:PF00361}.
NON_TER 1 1 {ECO:0000313|EMBL:ABF46939.1}.
SEQUENCE 217 AA; 24283 MW; 4976CB6484724AAE CRC64;
IIRISAILTP LMKEMSYPFL ILALWGVVMT SLICMRQTDL KSLIAYSSVS HMGLVIAAIL
IQTPWSLTGA IILMISHGLI SSTLFCLANL NYERTHSRTL LLVRGAQATL PLMATGWLFA
NLSNMALPPS MNLWGELTIM VSLFNWSPWT IMITGAGTLI TAAYTLYMFL MTQRGQVPHH
LTMIYPSHTR EHFLIIMHLM PMLLLIFKPA LISGMFS


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