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NF-kappaB transcription factor p65 subunit (RELA proto-oncogene, NF-kB subunit) (V-rel reticuloendotheliosis viral oncogene homolog A (Avian))

 A1XG22_BOVIN            Unreviewed;       551 AA.
A1XG22;
06-FEB-2007, integrated into UniProtKB/TrEMBL.
06-FEB-2007, sequence version 1.
25-OCT-2017, entry version 96.
SubName: Full=NF-kappaB transcription factor p65 subunit {ECO:0000313|EMBL:ABC75820.1};
SubName: Full=RELA proto-oncogene, NF-kB subunit {ECO:0000313|Ensembl:ENSBTAP00000018453};
SubName: Full=V-rel reticuloendotheliosis viral oncogene homolog A (Avian) {ECO:0000313|EMBL:AAI33595.1};
Name=RELA {ECO:0000313|EMBL:AAI33595.1,
ECO:0000313|Ensembl:ENSBTAP00000018453};
Bos taurus (Bovine).
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia;
Pecora; Bovidae; Bovinae; Bos.
NCBI_TaxID=9913 {ECO:0000313|EMBL:ABC75820.1};
[1] {ECO:0000313|EMBL:ABC75820.1}
NUCLEOTIDE SEQUENCE.
PubMed=17306370; DOI=10.1016/j.dci.2006.12.007;
Doleschall M., Mayer B., Cervenak J., Cervenak L., Kacskovics I.;
"Cloning, expression and characterization of the bovine p65 subunit of
NFkappaB.";
Dev. Comp. Immunol. 31:945-961(2007).
[2] {ECO:0000313|EMBL:AAI33595.1}
NUCLEOTIDE SEQUENCE.
STRAIN=Hereford {ECO:0000313|EMBL:AAI33595.1};
TISSUE=Thymus {ECO:0000313|EMBL:AAI33595.1};
Moore S., Alexander L., Brownstein M., Guan L., Lobo S., Meng Y.,
Tanaguchi M., Wang Z., Yu J., Prange C., Schreiber K., Shenmen C.,
Wagner L., Bala M., Barbazuk S., Barber S., Babakaiff R., Beland J.,
Chun E., Del Rio L., Gibson S., Hanson R., Kirkpatrick R., Liu J.,
Matsuo C., Mayo M., Santos R.R., Stott J., Tsai M., Wong D.,
Siddiqui A., Holt R., Jones S.J., Marra M.A.;
Submitted (FEB-2007) to the EMBL/GenBank/DDBJ databases.
[3] {ECO:0000313|Ensembl:ENSBTAP00000018453, ECO:0000313|Proteomes:UP000009136}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000018453,
ECO:0000313|Proteomes:UP000009136};
PubMed=19393038; DOI=10.1186/gb-2009-10-4-r42;
Zimin A.V., Delcher A.L., Florea L., Kelley D.R., Schatz M.C.,
Puiu D., Hanrahan F., Pertea G., Van Tassell C.P., Sonstegard T.S.,
Marcais G., Roberts M., Subramanian P., Yorke J.A., Salzberg S.L.;
"A whole-genome assembly of the domestic cow, Bos taurus.";
Genome Biol. 10:R42.01-R42.10(2009).
[4] {ECO:0000313|Ensembl:ENSBTAP00000018453}
IDENTIFICATION.
STRAIN=Hereford {ECO:0000313|Ensembl:ENSBTAP00000018453};
Ensembl;
Submitted (MAR-2016) to UniProtKB.
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EMBL; DAAA02063569; -; NOT_ANNOTATED_CDS; Genomic_DNA.
EMBL; BC133594; AAI33595.1; -; mRNA.
EMBL; DQ355511; ABC75820.1; -; mRNA.
RefSeq; NP_001073711.1; NM_001080242.2.
UniGene; Bt.26220; -.
STRING; 9913.ENSBTAP00000018453; -.
Ensembl; ENSBTAT00000018453; ENSBTAP00000018453; ENSBTAG00000013895.
GeneID; 508233; -.
KEGG; bta:508233; -.
CTD; 5970; -.
eggNOG; ENOG410IG8F; Eukaryota.
eggNOG; ENOG410XT64; LUCA.
GeneTree; ENSGT00500000044765; -.
HOGENOM; HOG000230474; -.
HOVERGEN; HBG017916; -.
KO; K04735; -.
OMA; EFSPMVF; -.
OrthoDB; EOG091G08JD; -.
TreeFam; TF325632; -.
Reactome; R-BTA-1169091; Activation of NF-kappaB in B cells.
Reactome; R-BTA-1810476; RIP-mediated NFkB activation via ZBP1.
Reactome; R-BTA-193692; Regulated proteolysis of p75NTR.
Reactome; R-BTA-202424; Downstream TCR signaling.
Reactome; R-BTA-209560; NF-kB is activated and signals survival.
Reactome; R-BTA-2871837; FCERI mediated NF-kB activation.
Reactome; R-BTA-3134963; DEx/H-box helicases activate type I IFN and inflammatory cytokines production.
Reactome; R-BTA-3214841; PKMTs methylate histone lysines.
Reactome; R-BTA-445989; TAK1 activates NFkB by phosphorylation and activation of IKKs complex.
Reactome; R-BTA-446652; Interleukin-1 family signaling.
Reactome; R-BTA-5607764; CLEC7A (Dectin-1) signaling.
Reactome; R-BTA-5621575; CD209 (DC-SIGN) signaling.
Reactome; R-BTA-933542; TRAF6 mediated NF-kB activation.
Proteomes; UP000009136; Chromosome 29.
Bgee; ENSBTAG00000013895; -.
GO; GO:0005829; C:cytosol; IBA:GO_Central.
GO; GO:0033256; C:I-kappaB/NF-kappaB complex; IBA:GO_Central.
GO; GO:0035525; C:NF-kappaB p50/p65 complex; IEA:Ensembl.
GO; GO:0000790; C:nuclear chromatin; IEA:Ensembl.
GO; GO:0005667; C:transcription factor complex; IEA:Ensembl.
GO; GO:0042805; F:actinin binding; IEA:Ensembl.
GO; GO:0033613; F:activating transcription factor binding; IEA:Ensembl.
GO; GO:0071532; F:ankyrin repeat binding; IEA:Ensembl.
GO; GO:0003682; F:chromatin binding; IBA:GO_Central.
GO; GO:0031490; F:chromatin DNA binding; IEA:Ensembl.
GO; GO:0042826; F:histone deacetylase binding; IEA:Ensembl.
GO; GO:0051059; F:NF-kappaB binding; IEA:Ensembl.
GO; GO:0042301; F:phosphate ion binding; IEA:Ensembl.
GO; GO:0046982; F:protein heterodimerization activity; IEA:Ensembl.
GO; GO:0042803; F:protein homodimerization activity; IEA:Ensembl.
GO; GO:0019901; F:protein kinase binding; IEA:Ensembl.
GO; GO:0047485; F:protein N-terminus binding; IEA:Ensembl.
GO; GO:0070491; F:repressing transcription factor binding; IEA:Ensembl.
GO; GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IEA:Ensembl.
GO; GO:0000980; F:RNA polymerase II distal enhancer sequence-specific DNA binding; IEA:Ensembl.
GO; GO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0000981; F:RNA polymerase II transcription factor activity, sequence-specific DNA binding; IBA:GO_Central.
GO; GO:0000983; F:transcription factor activity, RNA polymerase II core promoter sequence-specific; IEA:Ensembl.
GO; GO:0001077; F:transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding; IEA:Ensembl.
GO; GO:0001205; F:transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding; IEA:Ensembl.
GO; GO:0001078; F:transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding; IEA:Ensembl.
GO; GO:0031625; F:ubiquitin protein ligase binding; IEA:Ensembl.
GO; GO:0009887; P:animal organ morphogenesis; IEA:Ensembl.
GO; GO:0035729; P:cellular response to hepatocyte growth factor stimulus; IEA:Ensembl.
GO; GO:0070301; P:cellular response to hydrogen peroxide; IEA:Ensembl.
GO; GO:0071347; P:cellular response to interleukin-1; IEA:Ensembl.
GO; GO:0071354; P:cellular response to interleukin-6; IEA:Ensembl.
GO; GO:0071222; P:cellular response to lipopolysaccharide; IEA:Ensembl.
GO; GO:0071223; P:cellular response to lipoteichoic acid; IEA:Ensembl.
GO; GO:0071316; P:cellular response to nicotine; IEA:Ensembl.
GO; GO:0071375; P:cellular response to peptide hormone stimulus; IEA:Ensembl.
GO; GO:0071224; P:cellular response to peptidoglycan; IEA:Ensembl.
GO; GO:0001942; P:hair follicle development; IEA:Ensembl.
GO; GO:0007249; P:I-kappaB kinase/NF-kappaB signaling; IBA:GO_Central.
GO; GO:0006954; P:inflammatory response; IBA:GO_Central.
GO; GO:0045087; P:innate immune response; IBA:GO_Central.
GO; GO:0001889; P:liver development; IEA:Ensembl.
GO; GO:2001237; P:negative regulation of extrinsic apoptotic signaling pathway; IEA:Ensembl.
GO; GO:1901223; P:negative regulation of NIK/NF-kappaB signaling; IEA:Ensembl.
GO; GO:0042177; P:negative regulation of protein catabolic process; IEA:Ensembl.
GO; GO:0033234; P:negative regulation of protein sumoylation; IEA:Ensembl.
GO; GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IBA:GO_Central.
GO; GO:0038061; P:NIK/NF-kappaB signaling; IBA:GO_Central.
GO; GO:0070431; P:nucleotide-binding oligomerization domain containing 2 signaling pathway; IEA:Ensembl.
GO; GO:0008284; P:positive regulation of cell proliferation; IEA:Ensembl.
GO; GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB signaling; IEA:Ensembl.
GO; GO:0045084; P:positive regulation of interleukin-12 biosynthetic process; IEA:Ensembl.
GO; GO:2000630; P:positive regulation of miRNA metabolic process; IEA:Ensembl.
GO; GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; IEA:Ensembl.
GO; GO:1901224; P:positive regulation of NIK/NF-kappaB signaling; IEA:Ensembl.
GO; GO:1902895; P:positive regulation of pri-miRNA transcription from RNA polymerase II promoter; IEA:Ensembl.
GO; GO:0050862; P:positive regulation of T cell receptor signaling pathway; IEA:Ensembl.
GO; GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IBA:GO_Central.
GO; GO:1901522; P:positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus; IEA:Ensembl.
GO; GO:0043620; P:regulation of DNA-templated transcription in response to stress; IEA:Ensembl.
GO; GO:0050727; P:regulation of inflammatory response; IEA:Ensembl.
GO; GO:0034097; P:response to cytokine; IBA:GO_Central.
GO; GO:0032495; P:response to muramyl dipeptide; IEA:Ensembl.
GO; GO:0035994; P:response to muscle stretch; IEA:Ensembl.
GO; GO:0010224; P:response to UV-B; IEA:Ensembl.
GO; GO:0033209; P:tumor necrosis factor-mediated signaling pathway; IEA:Ensembl.
CDD; cd01177; IPT_NFkappaB; 1.
Gene3D; 2.60.40.10; -; 1.
Gene3D; 2.60.40.340; -; 1.
InterPro; IPR013783; Ig-like_fold.
InterPro; IPR014756; Ig_E-set.
InterPro; IPR002909; IPT.
InterPro; IPR033926; IPT_NFkappaB.
InterPro; IPR000451; NFkB/Dor.
InterPro; IPR008967; p53-like_TF_DNA-bd.
InterPro; IPR030495; RelA.
InterPro; IPR030492; RHD_CS.
InterPro; IPR032397; RHD_dimer.
InterPro; IPR011539; RHD_DNA_bind_dom.
InterPro; IPR037059; RHD_DNA_bind_dom_sf.
PANTHER; PTHR24169; PTHR24169; 1.
PANTHER; PTHR24169:SF1; PTHR24169:SF1; 1.
Pfam; PF16179; RHD_dimer; 1.
Pfam; PF00554; RHD_DNA_bind; 1.
PRINTS; PR00057; NFKBTNSCPFCT.
SMART; SM00429; IPT; 1.
SUPFAM; SSF49417; SSF49417; 1.
SUPFAM; SSF81296; SSF81296; 1.
PROSITE; PS01204; REL_1; 1.
PROSITE; PS50254; REL_2; 1.
2: Evidence at transcript level;
Complete proteome {ECO:0000313|Proteomes:UP000009136};
Reference proteome {ECO:0000313|Proteomes:UP000009136}.
DOMAIN 16 190 RHD. {ECO:0000259|PROSITE:PS50254}.
SEQUENCE 551 AA; 60387 MW; 06338EFAAA5926BA CRC64;
MDDLFPLIFP AEPAQASGPY VEIIEQPKQR GMRFRYKCEG RSAGSIPGER STDTTKTHPT
IKINGYTGPG TVRISLVTKD PPHRPHPHEL VGKDCRDGFY EAELCPDRCI HSFQNLGIQC
VKKRDLEQAI SQRIQTNNNP FQVPIEEQRG DYDLNAVRLC FQVTVRDPAG RPLRLAPVLS
HPIFDNRAPN TAELKICRVN RNSGSCLGGD EIFLLCDKVQ KEDIEVYFTG PGWEARGSFS
QADVHRQVAI VFRTPPYADP GLQAPVRVSM QLRRPSDREL SEPMEFQYLP DTDDRHRIEE
KRKRTYETFK SIMKKSPFNG PTDPRPPTRR IAVPNRGSAS IPKPAPQPYS FTPSLSTINF
EEFSPMVFPS GQIPSQTSAL APAPTPVLTQ TQVLAPAPAP APGMASTLAQ ALAPGLAQAV
TPPAPRTNQT GEGTLTEALL QLQFDTDEDL GALLGNNTDP AVFTDLASVD NSEFQQLLNQ
GVPMGPHTAE PMLMEYPEAI TRLVTGSQRP PDPAPTPLGP PGLTNGLLSG DEDFSSIADV
DFSALLSQIS S


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