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Na( )-translocating NADH-quinone reductase subunit B (Na( )-NQR subunit B) (Na( )-translocating NQR subunit B) (EC 1.6.5.8) (NQR complex subunit B) (NQR-1 subunit B)

 F4AL21_GLAS4            Unreviewed;       403 AA.
F4AL21;
28-JUN-2011, integrated into UniProtKB/TrEMBL.
28-JUN-2011, sequence version 1.
27-SEP-2017, entry version 42.
RecName: Full=Na(+)-translocating NADH-quinone reductase subunit B {ECO:0000256|HAMAP-Rule:MF_00426};
Short=Na(+)-NQR subunit B {ECO:0000256|HAMAP-Rule:MF_00426};
Short=Na(+)-translocating NQR subunit B {ECO:0000256|HAMAP-Rule:MF_00426};
EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00426};
AltName: Full=NQR complex subunit B {ECO:0000256|HAMAP-Rule:MF_00426};
AltName: Full=NQR-1 subunit B {ECO:0000256|HAMAP-Rule:MF_00426};
Name=nqrB {ECO:0000256|HAMAP-Rule:MF_00426};
OrderedLocusNames=Glaag_0524 {ECO:0000313|EMBL:AEE21487.1};
Glaciecola sp. (strain 4H-3-7+YE-5).
Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
Alteromonadaceae; Glaciecola.
NCBI_TaxID=983545 {ECO:0000313|EMBL:AEE21487.1, ECO:0000313|Proteomes:UP000006544};
[1] {ECO:0000313|EMBL:AEE21487.1, ECO:0000313|Proteomes:UP000006544}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=4H-3-7+YE-5 {ECO:0000313|EMBL:AEE21487.1,
ECO:0000313|Proteomes:UP000006544};
PubMed=21705587; DOI=10.1128/JB.05468-11;
US DOE Joint Genome Institute;
Klippel B., Lochner A., Bruce D.C., Davenport K.W., Detter C.,
Goodwin L.A., Han J., Han S., Land M.L., Mikhailova N., Nolan M.,
Pennacchio L., Pitluck S., Tapia R., Woyke T., Wiebusch S., Basner A.,
Abe F., Horikoshi K., Keller M., Antranikian G.;
"Complete genome sequence of the marine, cellulose and xylan degrading
bacterium Glaciecola sp. 4H-3-7+YE-5.";
J. Bacteriol. 193:4547-4548(2011).
[2]
NUCLEOTIDE SEQUENCE.
STRAIN=4H-3-7+YE-5;
US DOE Joint Genome Institute;
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L.,
Pitluck S., Davenport K., Detter J.C., Han C., Tapia R., Land M.,
Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I.,
Piela B., Lochner A., Antranikian F.I., Woyke T.;
"Complete sequence of chromosome of Glaciecola sp. 4H-3-7+YE-5.";
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases.
-!- FUNCTION: NQR complex catalyzes the reduction of ubiquinone-1 to
ubiquinol by two successive reactions, coupled with the transport
of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE
are probably involved in the second step, the conversion of
ubisemiquinone to ubiquinol. {ECO:0000256|HAMAP-Rule:MF_00426}.
-!- CATALYTIC ACTIVITY: NADH + ubiquinone + n Na(+)(In) = NAD(+) +
ubiquinol + n Na(+)(Out). {ECO:0000256|HAMAP-Rule:MF_00426}.
-!- COFACTOR:
Name=FMN; Xref=ChEBI:CHEBI:58210;
Evidence={ECO:0000256|HAMAP-Rule:MF_00426,
ECO:0000256|PIRSR:PIRSR016055-50};
-!- SUBUNIT: Composed of six subunits; NqrA, NqrB, NqrC, NqrD, NqrE
and NqrF. {ECO:0000256|HAMAP-Rule:MF_00426}.
-!- SUBCELLULAR LOCATION: Cell inner membrane {ECO:0000256|HAMAP-
Rule:MF_00426}; Multi-pass membrane protein {ECO:0000256|HAMAP-
Rule:MF_00426}.
-!- SIMILARITY: Belongs to the NqrB/RnfD family. {ECO:0000256|HAMAP-
Rule:MF_00426, ECO:0000256|SAAS:SAAS00571749}.
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EMBL; CP002526; AEE21487.1; -; Genomic_DNA.
RefSeq; WP_008303709.1; NC_015497.1.
STRING; 983545.Glaag_0524; -.
EnsemblBacteria; AEE21487; AEE21487; Glaag_0524.
KEGG; gag:Glaag_0524; -.
eggNOG; ENOG4108J5C; Bacteria.
eggNOG; COG1805; LUCA.
KO; K00347; -.
OrthoDB; POG091H047N; -.
Proteomes; UP000006544; Chromosome.
GO; GO:0009276; C:Gram-negative-bacterium-type cell wall; IEA:InterPro.
GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO; GO:0010181; F:FMN binding; IEA:InterPro.
GO; GO:0016655; F:oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; IEA:UniProtKB-UniRule.
GO; GO:0022904; P:respiratory electron transport chain; IEA:InterPro.
GO; GO:0006814; P:sodium ion transport; IEA:UniProtKB-UniRule.
HAMAP; MF_00426; NqrB; 1.
InterPro; IPR004338; NADH_Q_Rdtase_NQR2_RnfD.
InterPro; IPR010966; NqrB.
Pfam; PF03116; NQR2_RnfD_RnfE; 1.
PIRSF; PIRSF016055; NADH-UbQ_OxRdtase_B_su; 1.
TIGRFAMs; TIGR01937; nqrB; 1.
3: Inferred from homology;
Cell inner membrane {ECO:0000256|HAMAP-Rule:MF_00426};
Cell membrane {ECO:0000256|HAMAP-Rule:MF_00426};
Complete proteome {ECO:0000313|Proteomes:UP000006544};
Flavoprotein {ECO:0000256|HAMAP-Rule:MF_00426,
ECO:0000256|PIRSR:PIRSR016055-50};
FMN {ECO:0000256|HAMAP-Rule:MF_00426, ECO:0000256|PIRSR:PIRSR016055-
50}; Ion transport {ECO:0000256|HAMAP-Rule:MF_00426};
Membrane {ECO:0000256|HAMAP-Rule:MF_00426,
ECO:0000256|SAAS:SAAS00090595}; NAD {ECO:0000256|HAMAP-Rule:MF_00426};
Oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00426};
Phosphoprotein {ECO:0000256|HAMAP-Rule:MF_00426,
ECO:0000256|PIRSR:PIRSR016055-50};
Sodium {ECO:0000256|HAMAP-Rule:MF_00426};
Sodium transport {ECO:0000256|HAMAP-Rule:MF_00426};
Transmembrane {ECO:0000256|HAMAP-Rule:MF_00426,
ECO:0000256|SAAS:SAAS00090595};
Transmembrane helix {ECO:0000256|HAMAP-Rule:MF_00426,
ECO:0000256|SAAS:SAAS00090595};
Transport {ECO:0000256|HAMAP-Rule:MF_00426};
Ubiquinone {ECO:0000256|HAMAP-Rule:MF_00426,
ECO:0000313|EMBL:AEE21487.1}.
TRANSMEM 56 73 Helical. {ECO:0000256|HAMAP-
Rule:MF_00426}.
TRANSMEM 117 141 Helical. {ECO:0000256|HAMAP-
Rule:MF_00426}.
TRANSMEM 153 172 Helical. {ECO:0000256|HAMAP-
Rule:MF_00426}.
TRANSMEM 258 280 Helical. {ECO:0000256|HAMAP-
Rule:MF_00426}.
TRANSMEM 287 305 Helical. {ECO:0000256|HAMAP-
Rule:MF_00426}.
TRANSMEM 317 335 Helical. {ECO:0000256|HAMAP-
Rule:MF_00426}.
TRANSMEM 347 365 Helical. {ECO:0000256|HAMAP-
Rule:MF_00426}.
TRANSMEM 371 391 Helical. {ECO:0000256|HAMAP-
Rule:MF_00426}.
MOD_RES 231 231 FMN phosphoryl threonine.
{ECO:0000256|HAMAP-Rule:MF_00426,
ECO:0000256|PIRSR:PIRSR016055-50}.
SEQUENCE 403 AA; 44067 MW; 3A8B3537E132034E CRC64;
MGLKAYLEKI EPNFEAGGKY EKWYALYEAA ATIFYTPGKV NKTGTHVRDS IDLKRIMIMV
WAATFPAMFY GMYNIGQQAH NVILNGGASV PDMWQAALFT ALGGQIGLES TGGLAMFLYG
ACFFLPIYAV TFIVGGFWEV LFASVRKHEV NEGFFVTSVL FALTLPATIP LWQVALGITF
GVVIAKEVFG GTGRNFLNPA LSGRAFLYFA YPAQISGDAI WTAADGFSGA TWLSQAAAGN
VTDWSLNADW WDAFFGNIQG SVGEVSTLAI LLGGLFIIYM RIASWRIVLG VLLGGAVFST
LLNFIGSDTN SMFAMPWYWH VVTGGFAFGM FFMATDPVSA SFTNSAKWAY GFLIGLMCVL
IRVLNPAFPE GMMLAILFAN LWAPLFDYFV AQSNIKRRMA RVG


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