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Nicotinic acetylcholine receptor alpha5, isoform B (Nicotinic acetylcholine receptor alpha5, isoform D) (Nicotinic acetylcholine receptor alpha5, isoform H)

 Q7KT97_DROME            Unreviewed;       808 AA.
Q7KT97; Q7KT98;
05-JUL-2004, integrated into UniProtKB/TrEMBL.
05-JUL-2004, sequence version 1.
30-AUG-2017, entry version 135.
SubName: Full=Nicotinic acetylcholine receptor alpha5, isoform B {ECO:0000313|EMBL:AAS64703.1};
SubName: Full=Nicotinic acetylcholine receptor alpha5, isoform D {ECO:0000313|EMBL:AAS64702.2};
SubName: Full=Nicotinic acetylcholine receptor alpha5, isoform H {ECO:0000313|EMBL:AFH03701.1};
Name=nAChRalpha5 {ECO:0000313|EMBL:AAS64703.1,
ECO:0000313|FlyBase:FBgn0028875};
Synonyms=anon-WO02059370.44 {ECO:0000313|EMBL:AAS64703.1},
BG:DS05899.4 {ECO:0000313|EMBL:AAS64703.1},
BG:DS05899.5 {ECO:0000313|EMBL:AAS64703.1},
CT14633 {ECO:0000313|EMBL:AAS64703.1},
da5 {ECO:0000313|EMBL:AAS64703.1}, daf {ECO:0000313|EMBL:AAS64703.1},
Dalpha5 {ECO:0000313|EMBL:AAS64703.1},
Dmel\CG32975 {ECO:0000313|EMBL:AAS64703.1},
lincRNA.128 {ECO:0000313|EMBL:AAS64703.1},
lincRNA.S1055 {ECO:0000313|EMBL:AAS64703.1},
nAChR {ECO:0000313|EMBL:AAS64703.1},
nAChRalpha-34E {ECO:0000313|EMBL:AAS64703.1},
nAcR-alpha-34E {ECO:0000313|FlyBase:FBgn0028875},
nAcRalpha-34E {ECO:0000313|EMBL:AAS64703.1},
nAcRalpha-34e {ECO:0000313|EMBL:AAS64703.1},
Nic 34E {ECO:0000313|EMBL:AAS64703.1};
ORFNames=CG16878 {ECO:0000313|EMBL:AAS64703.1},
CG32975 {ECO:0000313|EMBL:AAS64703.1,
ECO:0000313|FlyBase:FBgn0028875},
CG4498 {ECO:0000313|EMBL:AAS64703.1},
Dmel_CG32975 {ECO:0000313|EMBL:AAS64703.1};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AAS64703.1, ECO:0000313|Proteomes:UP000000803};
[1] {ECO:0000313|EMBL:AAS64703.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AAS64703.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[3] {ECO:0000313|EMBL:AAS64703.1, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[4] {ECO:0000313|EMBL:AAS64703.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002).
[5] {ECO:0000313|EMBL:AAS64703.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[6] {ECO:0000313|EMBL:AAS64703.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[7] {ECO:0000313|EMBL:AAS64703.1}
NUCLEOTIDE SEQUENCE.
Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S.,
Svirskas R., Rubin G.;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[8] {ECO:0000313|EMBL:AAS64703.1}
NUCLEOTIDE SEQUENCE.
Berkeley Drosophila Genome Project;
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E.,
Yu C., Rubin G.;
"Drosophila melanogaster release 4 sequence.";
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AAS64703.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[10] {ECO:0000313|EMBL:AAS64703.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
[11] {ECO:0000313|EMBL:AAS64703.1}
NUCLEOTIDE SEQUENCE.
FlyBase;
Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
-!- SUBCELLULAR LOCATION: Cell junction, synapse, postsynaptic cell
membrane {ECO:0000256|SAAS:SAAS00548360}; Multi-pass membrane
protein {ECO:0000256|SAAS:SAAS00548360}.
-!- SUBCELLULAR LOCATION: Cell membrane
{ECO:0000256|SAAS:SAAS00548374}; Multi-pass membrane protein
{ECO:0000256|SAAS:SAAS00548374}.
-!- SIMILARITY: Belongs to the ligand-gated ion channel (TC 1.A.9)
family. {ECO:0000256|RuleBase:RU000687,
ECO:0000256|SAAS:SAAS00569405}.
-----------------------------------------------------------------------
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EMBL; AE014134; AAS64702.2; -; Genomic_DNA.
EMBL; AE014134; AAS64703.1; -; Genomic_DNA.
EMBL; AE014134; AFH03701.1; -; Genomic_DNA.
RefSeq; NP_001246027.1; NM_001259098.3.
RefSeq; NP_995707.2; NM_205985.3.
RefSeq; NP_995708.1; NM_205986.4.
UniGene; Dm.5939; -.
STRING; 7227.FBpp0289821; -.
ChEMBL; CHEMBL3350223; -.
EnsemblMetazoa; FBtr0080594; FBpp0089367; FBgn0028875.
EnsemblMetazoa; FBtr0300594; FBpp0289821; FBgn0028875.
EnsemblMetazoa; FBtr0309867; FBpp0301601; FBgn0028875.
GeneID; 34826; -.
KEGG; dme:Dmel_CG32975; -.
UCSC; CG32975-RB; d. melanogaster.
UCSC; CG32975-RC; d. melanogaster.
CTD; 34826; -.
FlyBase; FBgn0028875; nAChRalpha5.
eggNOG; KOG3646; Eukaryota.
eggNOG; ENOG410XQGR; LUCA.
GeneTree; ENSGT00790000122957; -.
KO; K05312; -.
OMA; IAEYFAT; -.
OrthoDB; EOG091G0R20; -.
Reactome; R-DME-629594; Highly calcium permeable postsynaptic nicotinic acetylcholine receptors.
ChiTaRS; nAcRalpha-34E; fly.
GenomeRNAi; 34826; -.
Proteomes; UP000000803; Chromosome 2L.
Bgee; FBgn0028875; -.
GO; GO:0005892; C:acetylcholine-gated channel complex; IDA:FlyBase.
GO; GO:0030054; C:cell junction; IEA:UniProtKB-KW.
GO; GO:0016021; C:integral component of membrane; IDA:FlyBase.
GO; GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-SubCell.
GO; GO:0042166; F:acetylcholine binding; IDA:FlyBase.
GO; GO:0022848; F:acetylcholine-gated cation-selective channel activity; IDA:FlyBase.
GO; GO:0006812; P:cation transport; IDA:FlyBase.
Gene3D; 2.70.170.10; -; 1.
InterPro; IPR006202; Neur_chan_lig-bd.
InterPro; IPR006201; Neur_channel.
InterPro; IPR006029; Neurotrans-gated_channel_TM.
InterPro; IPR018000; Neurotransmitter_ion_chnl_CS.
InterPro; IPR002394; Nicotinic_acetylcholine_rcpt.
PANTHER; PTHR18945; PTHR18945; 1.
Pfam; PF02931; Neur_chan_LBD; 1.
Pfam; PF02932; Neur_chan_memb; 1.
PRINTS; PR00254; NICOTINICR.
PRINTS; PR00252; NRIONCHANNEL.
SUPFAM; SSF63712; SSF63712; 1.
SUPFAM; SSF90112; SSF90112; 2.
TIGRFAMs; TIGR00860; LIC; 1.
PROSITE; PS00236; NEUROTR_ION_CHANNEL; 1.
3: Inferred from homology;
Cell junction {ECO:0000256|SAAS:SAAS00032441};
Cell membrane {ECO:0000256|SAAS:SAAS00032539};
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Disulfide bond {ECO:0000256|SAAS:SAAS00079022};
Ion channel {ECO:0000256|SAAS:SAAS00032596};
Ion transport {ECO:0000256|SAAS:SAAS00032596};
Ligand-gated ion channel {ECO:0000256|SAAS:SAAS00032596};
Membrane {ECO:0000256|SAAS:SAAS00032441,
ECO:0000256|SAAS:SAAS00032539, ECO:0000256|SAAS:SAAS00081645,
ECO:0000256|SAM:Phobius};
Postsynaptic cell membrane {ECO:0000256|SAAS:SAAS00032441};
Receptor {ECO:0000256|SAAS:SAAS00079193, ECO:0000313|EMBL:AAS64703.1};
Reference proteome {ECO:0000313|Proteomes:UP000000803};
Synapse {ECO:0000256|SAAS:SAAS00032441};
Transmembrane {ECO:0000256|SAAS:SAAS00081645,
ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAAS:SAAS00081645,
ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|SAAS:SAAS00032596}.
TRANSMEM 521 540 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 552 570 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 582 605 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 782 806 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 313 520 Neur_chan_LBD.
{ECO:0000259|Pfam:PF02931}.
DOMAIN 527 798 Neur_chan_memb.
{ECO:0000259|Pfam:PF02932}.
SEQUENCE 808 AA; 91290 MW; EB844643AF6ED5B4 CRC64;
MKNAQLKLTE VDDDELWLAV RLAHCSSNIS SSSSTRTTSS NKRHNQQLTT LQPRSLSTKH
HSNIASEQHN SQQQEPASKD EDVANHGRSN DQQTHLQQLD SSNMLSPKTA AAATAAGDEA
TTQQPTNIRL CARKRQRLRR RRKRKPATPN ETDIKKQQQL SMPPFKTRKS TDTYSTPAAI
TSCPTATYMQ CRASDNEFSI PISRHDRVST ATFAWVLHVL QVLLVSLQQW QLHVQQRSVL
LFRRIAASTI AFISYLGSFA AQLRSSSSSS SNSSNSGNSS STQILNGLNK HSWIFLLIYL
NLSAKVCLAG YHEKRLLHDL LDPYNTLERP VLNESDPLQL SFGLTLMQII DVDEKNQLLV
TNVWLKLEWN DMNLRWNTSD YGGVKDLRIP PHRIWKPDVL MYNSADEGFD GTYQTNVVVR
NNGSCLYVPP GIFKSTCKID ITWFPFDDQR CEMKFGSWTY DGFQLDLQLQ DETGGDISSY
VLNGEWELLG VPGKRNEIYY NCCPEPYIDI TFAIIIRRRT LYYFFNLIIP CVLIASMALL
GFTLPPDSGE KLSLGVTILL SLTVFLNMVA ETMPATSDAV PLLGTYFNCI MFMVASSVVS
TILILNYHHR NADTHEMSEW IRIVFLCWLP WILRMSRPGR PLILEFPTTP CSDTSSERKH
QILSDVELKE RSSKSLLANV LDIDDDFRHN CRPMTPGGTL PHNPAFYRTV YGQGDDGSIG
PIGSTRMPDA VTHHTCIKSS TEYELGLILK EIRFITDQLR KDDECNDIAN DWKFAAMVVD
RLCLIIFTMF TILATIAVLL SAPHIIVS


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