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Nicotinic acetylcholine receptor alpha6, isoform B (Nicotinic acetylcholine receptor alpha6, isoform G)

 Q7KTF9_DROME            Unreviewed;       494 AA.
Q7KTF9;
05-JUL-2004, integrated into UniProtKB/TrEMBL.
05-JUL-2004, sequence version 1.
30-AUG-2017, entry version 127.
SubName: Full=Nicotinic acetylcholine receptor alpha6, isoform B {ECO:0000313|EMBL:AAS64670.1};
SubName: Full=Nicotinic acetylcholine receptor alpha6, isoform G {ECO:0000313|EMBL:ADV37014.1};
Name=nAChRalpha6 {ECO:0000313|EMBL:AAS64670.1,
ECO:0000313|FlyBase:FBgn0032151};
Synonyms=alpha6 {ECO:0000313|EMBL:AAS64670.1},
BcDNA:GH01410 {ECO:0000313|EMBL:AAS64670.1},
CT13662 {ECO:0000313|EMBL:AAS64670.1},
Dalpha6 {ECO:0000313|EMBL:AAS64670.1},
das {ECO:0000313|EMBL:AAS64670.1},
Dmel\CG4128 {ECO:0000313|EMBL:AAS64670.1},
nAChR {ECO:0000313|EMBL:AAS64670.1},
nAChR alpha 6 {ECO:0000313|EMBL:AAS64670.1},
nAChR-alpha30D {ECO:0000313|EMBL:AAS64670.1},
nAChRalpha {ECO:0000313|EMBL:AAS64670.1},
nAChRAlpha-30D {ECO:0000313|EMBL:AAS64670.1},
nAChRalpha-30D {ECO:0000313|EMBL:AAS64670.1},
nAcR-alpha-30D {ECO:0000313|FlyBase:FBgn0032151},
nAcRalpha-30D {ECO:0000313|EMBL:AAS64670.1},
rsn {ECO:0000313|EMBL:AAS64670.1};
ORFNames=CG4128 {ECO:0000313|EMBL:AAS64670.1,
ECO:0000313|FlyBase:FBgn0032151},
Dmel_CG4128 {ECO:0000313|EMBL:AAS64670.1};
Drosophila melanogaster (Fruit fly).
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha;
Ephydroidea; Drosophilidae; Drosophila; Sophophora.
NCBI_TaxID=7227 {ECO:0000313|EMBL:AAS64670.1, ECO:0000313|Proteomes:UP000000803};
[1] {ECO:0000313|EMBL:AAS64670.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=10731132; DOI=10.1126/science.287.5461.2185;
Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D.,
Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A., Galle R.F.,
George R.A., Lewis S.E., Richards S., Ashburner M., Henderson S.N.,
Sutton G.G., Wortman J.R., Yandell M.D., Zhang Q., Chen L.X.,
Brandon R.C., Rogers Y.H., Blazej R.G., Champe M., Pfeiffer B.D.,
Wan K.H., Doyle C., Baxter E.G., Helt G., Nelson C.R., Gabor G.L.,
Abril J.F., Agbayani A., An H.J., Andrews-Pfannkoch C., Baldwin D.,
Ballew R.M., Basu A., Baxendale J., Bayraktaroglu L., Beasley E.M.,
Beeson K.Y., Benos P.V., Berman B.P., Bhandari D., Bolshakov S.,
Borkova D., Botchan M.R., Bouck J., Brokstein P., Brottier P.,
Burtis K.C., Busam D.A., Butler H., Cadieu E., Center A., Chandra I.,
Cherry J.M., Cawley S., Dahlke C., Davenport L.B., Davies P.,
de Pablos B., Delcher A., Deng Z., Mays A.D., Dew I., Dietz S.M.,
Dodson K., Doup L.E., Downes M., Dugan-Rocha S., Dunkov B.C., Dunn P.,
Durbin K.J., Evangelista C.C., Ferraz C., Ferriera S., Fleischmann W.,
Fosler C., Gabrielian A.E., Garg N.S., Gelbart W.M., Glasser K.,
Glodek A., Gong F., Gorrell J.H., Gu Z., Guan P., Harris M.,
Harris N.L., Harvey D., Heiman T.J., Hernandez J.R., Houck J.,
Hostin D., Houston K.A., Howland T.J., Wei M.H., Ibegwam C.,
Jalali M., Kalush F., Karpen G.H., Ke Z., Kennison J.A., Ketchum K.A.,
Kimmel B.E., Kodira C.D., Kraft C., Kravitz S., Kulp D., Lai Z.,
Lasko P., Lei Y., Levitsky A.A., Li J., Li Z., Liang Y., Lin X.,
Liu X., Mattei B., McIntosh T.C., McLeod M.P., McPherson D.,
Merkulov G., Milshina N.V., Mobarry C., Morris J., Moshrefi A.,
Mount S.M., Moy M., Murphy B., Murphy L., Muzny D.M., Nelson D.L.,
Nelson D.R., Nelson K.A., Nixon K., Nusskern D.R., Pacleb J.M.,
Palazzolo M., Pittman G.S., Pan S., Pollard J., Puri V., Reese M.G.,
Reinert K., Remington K., Saunders R.D., Scheeler F., Shen H.,
Shue B.C., Siden-Kiamos I., Simpson M., Skupski M.P., Smith T.,
Spier E., Spradling A.C., Stapleton M., Strong R., Sun E.,
Svirskas R., Tector C., Turner R., Venter E., Wang A.H., Wang X.,
Wang Z.Y., Wassarman D.A., Weinstock G.M., Weissenbach J.,
Williams S.M., WoodageT, Worley K.C., Wu D., Yang S., Yao Q.A., Ye J.,
Yeh R.F., Zaveri J.S., Zhan M., Zhang G., Zhao Q., Zheng L.,
Zheng X.H., Zhong F.N., Zhong W., Zhou X., Zhu S., Zhu X., Smith H.O.,
Gibbs R.A., Myers E.W., Rubin G.M., Venter J.C.;
"The genome sequence of Drosophila melanogaster.";
Science 287:2185-2195(2000).
[2] {ECO:0000313|EMBL:AAS64670.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537568;
Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A.,
Patel S., Adams M., Champe M., Dugan S.P., Frise E., Hodgson A.,
George R.A., Hoskins R.A., Laverty T., Muzny D.M., Nelson C.R.,
Pacleb J.M., Park S., Pfeiffer B.D., Richards S., Sodergren E.J.,
Svirskas R., Tabor P.E., Wan K., Stapleton M., Sutton G.G., Venter C.,
Weinstock G., Scherer S.E., Myers E.W., Gibbs R.A., Rubin G.M.;
"Finishing a whole-genome shotgun: release 3 of the Drosophila
melanogaster euchromatic genome sequence.";
Genome Biol. 3:RESEARCH0079-RESEARCH0079(2002).
[3] {ECO:0000313|EMBL:AAS64670.1, ECO:0000313|Proteomes:UP000000803}
GENOME REANNOTATION.
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537572; DOI=10.1186/gb-2002-3-12-research0083;
Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S.,
Hradecky P., Huang Y., Kaminker J.S., Millburn G.H., Prochnik S.E.,
Smith C.D., Tupy J.L., Whitfied E.J., Bayraktaroglu L., Berman B.P.,
Bettencourt B.R., Celniker S.E., de Grey A.D., Drysdale R.A.,
Harris N.L., Richter J., Russo S., Schroeder A.J., Shu S.Q.,
Stapleton M., Yamada C., Ashburner M., Gelbart W.M., Rubin G.M.,
Lewis S.E.;
"Annotation of the Drosophila melanogaster euchromatic genome: a
systematic review.";
Genome Biol. 3:RESEARCH0083.1-RESEARCH0083.22(2002).
[4] {ECO:0000313|EMBL:AAS64670.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537573;
Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J., Svirskas R.,
Patel S., Frise E., Wheeler D.A., Lewis S.E., Rubin G.M.,
Ashburner M., Celniker S.E.;
"The transposable elements of the Drosophila melanogaster euchromatin:
a genomics perspective.";
Genome Biol. 3:RESEARCH0084-RESEARCH0084(2002).
[5] {ECO:0000313|EMBL:AAS64670.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=12537574;
Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A.,
Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A., Sutton G.G.,
Yasuhara J.C., Wakimoto B.T., Myers E.W., Celniker S.E., Rubin G.M.,
Karpen G.H.;
"Heterochromatic sequences in a Drosophila whole-genome shotgun
assembly.";
Genome Biol. 3:RESEARCH0085-RESEARCH0085(2002).
[6] {ECO:0000313|EMBL:AAS64670.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=16110336; DOI=10.1371/journal.pcbi.0010022;
Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D.,
Ashburner M., Anxolabehere D.;
"Combined evidence annotation of transposable elements in genome
sequences.";
PLoS Comput. Biol. 1:166-175(2005).
[7] {ECO:0000313|EMBL:AAS64670.1}
NUCLEOTIDE SEQUENCE.
Celniker S., Carlson J., Wan K., Frise E., Hoskins R., Park S.,
Svirskas R., Rubin G.;
Submitted (AUG-2006) to the EMBL/GenBank/DDBJ databases.
[8] {ECO:0000313|EMBL:AAS64670.1}
NUCLEOTIDE SEQUENCE.
Berkeley Drosophila Genome Project;
Celniker S., Carlson J., Wan K., Pfeiffer B., Frise E., George R.,
Hoskins R., Stapleton M., Pacleb J., Park S., Svirskas R., Smith E.,
Yu C., Rubin G.;
"Drosophila melanogaster release 4 sequence.";
Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases.
[9] {ECO:0000313|EMBL:AAS64670.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569856; DOI=10.1126/science.1139815;
Smith C.D., Shu S., Mungall C.J., Karpen G.H.;
"The Release 5.1 annotation of Drosophila melanogaster
heterochromatin.";
Science 316:1586-1591(2007).
[10] {ECO:0000313|EMBL:AAS64670.1, ECO:0000313|Proteomes:UP000000803}
NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
STRAIN=Berkeley {ECO:0000313|Proteomes:UP000000803};
PubMed=17569867; DOI=10.1126/science.1139816;
Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M.,
Frise E., Wan K.H., Park S., Mendez-Lago M., Rossi F., Villasante A.,
Dimitri P., Karpen G.H., Celniker S.E.;
"Sequence finishing and mapping of Drosophila melanogaster
heterochromatin.";
Science 316:1625-1628(2007).
[11] {ECO:0000313|EMBL:AAS64670.1}
NUCLEOTIDE SEQUENCE.
FlyBase;
Submitted (DEC-2016) to the EMBL/GenBank/DDBJ databases.
-!- SUBCELLULAR LOCATION: Cell junction, synapse, postsynaptic cell
membrane {ECO:0000256|SAAS:SAAS00548360}; Multi-pass membrane
protein {ECO:0000256|SAAS:SAAS00548360}.
-!- SUBCELLULAR LOCATION: Cell membrane
{ECO:0000256|SAAS:SAAS00548374}; Multi-pass membrane protein
{ECO:0000256|SAAS:SAAS00548374}.
-!- SIMILARITY: Belongs to the ligand-gated ion channel (TC 1.A.9)
family. {ECO:0000256|RuleBase:RU000687,
ECO:0000256|SAAS:SAAS00569405}.
-----------------------------------------------------------------------
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Distributed under the Creative Commons Attribution-NoDerivs License
-----------------------------------------------------------------------
EMBL; AE014134; AAS64670.1; -; Genomic_DNA.
EMBL; AE014134; ADV37014.1; -; Genomic_DNA.
RefSeq; NP_001188764.1; NM_001201835.3.
RefSeq; NP_995673.1; NM_205951.2.
UniGene; Dm.4086; -.
EnsemblMetazoa; FBtr0079916; FBpp0079506; FBgn0032151.
EnsemblMetazoa; FBtr0303898; FBpp0292901; FBgn0032151.
GeneID; 34304; -.
KEGG; dme:Dmel_CG4128; -.
UCSC; CG4128-RB; d. melanogaster.
CTD; 34304; -.
FlyBase; FBgn0032151; nAChRalpha6.
GeneTree; ENSGT00790000122957; -.
KO; K05312; -.
OrthoDB; EOG091G0R20; -.
Reactome; R-DME-629594; Highly calcium permeable postsynaptic nicotinic acetylcholine receptors.
ChiTaRS; nAcRalpha-30D; fly.
GenomeRNAi; 34304; -.
Proteomes; UP000000803; Chromosome 2L.
Bgee; FBgn0032151; -.
GO; GO:0005892; C:acetylcholine-gated channel complex; IDA:FlyBase.
GO; GO:0030054; C:cell junction; IEA:UniProtKB-KW.
GO; GO:0016021; C:integral component of membrane; IDA:FlyBase.
GO; GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-SubCell.
GO; GO:0022848; F:acetylcholine-gated cation-selective channel activity; ISS:FlyBase.
GO; GO:0006812; P:cation transport; IDA:FlyBase.
GO; GO:0046716; P:muscle cell cellular homeostasis; IMP:FlyBase.
GO; GO:0017085; P:response to insecticide; IMP:FlyBase.
GO; GO:0007271; P:synaptic transmission, cholinergic; IMP:FlyBase.
Gene3D; 2.70.170.10; -; 1.
InterPro; IPR006202; Neur_chan_lig-bd.
InterPro; IPR006201; Neur_channel.
InterPro; IPR006029; Neurotrans-gated_channel_TM.
InterPro; IPR018000; Neurotransmitter_ion_chnl_CS.
InterPro; IPR002394; Nicotinic_acetylcholine_rcpt.
PANTHER; PTHR18945; PTHR18945; 1.
Pfam; PF02931; Neur_chan_LBD; 1.
Pfam; PF02932; Neur_chan_memb; 1.
PRINTS; PR00254; NICOTINICR.
PRINTS; PR00252; NRIONCHANNEL.
SUPFAM; SSF63712; SSF63712; 1.
SUPFAM; SSF90112; SSF90112; 1.
TIGRFAMs; TIGR00860; LIC; 1.
PROSITE; PS00236; NEUROTR_ION_CHANNEL; 1.
3: Inferred from homology;
Cell junction {ECO:0000256|SAAS:SAAS00032441};
Cell membrane {ECO:0000256|SAAS:SAAS00032539};
Complete proteome {ECO:0000313|Proteomes:UP000000803};
Disulfide bond {ECO:0000256|SAAS:SAAS00079022};
Ion channel {ECO:0000256|SAAS:SAAS00032596};
Ion transport {ECO:0000256|SAAS:SAAS00032596};
Ligand-gated ion channel {ECO:0000256|SAAS:SAAS00032596};
Membrane {ECO:0000256|SAAS:SAAS00032441,
ECO:0000256|SAAS:SAAS00032539, ECO:0000256|SAAS:SAAS00081645,
ECO:0000256|SAM:Phobius};
Postsynaptic cell membrane {ECO:0000256|SAAS:SAAS00032441};
Receptor {ECO:0000256|SAAS:SAAS00079193, ECO:0000313|EMBL:AAS64670.1};
Reference proteome {ECO:0000313|Proteomes:UP000000803};
Synapse {ECO:0000256|SAAS:SAAS00032441};
Transmembrane {ECO:0000256|SAAS:SAAS00081645,
ECO:0000256|SAM:Phobius};
Transmembrane helix {ECO:0000256|SAAS:SAAS00081645,
ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|SAAS:SAAS00032596}.
TRANSMEM 6 25 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 238 257 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 299 324 Helical. {ECO:0000256|SAM:Phobius}.
TRANSMEM 468 492 Helical. {ECO:0000256|SAM:Phobius}.
DOMAIN 30 237 Neur_chan_LBD.
{ECO:0000259|Pfam:PF02931}.
DOMAIN 244 484 Neur_chan_memb.
{ECO:0000259|Pfam:PF02932}.
SEQUENCE 494 AA; 56087 MW; C1C058E43D66C9C6 CRC64;
MDSPLPASLS LFVLLIFLAI IKESCQGPHE KRLLNHLLST YNTLERPVAN ESEPLEVKFG
LTLQQIIDVD EKNQLLITNL WLSLEWNDYN LRWNETEYGG VKDLRITPNK LWKPDVLMYN
SADEGFDGTY HTNIVVKHNG SCLYVPPGIF KSTCKIDITW FPFDDQHCEM KFGSWTYDGN
QLDLVLNSED GGDLSDFITN GEWYLLAMPG KKNTIVYACC PEPYVDITFT IQIRRRTLYY
FFNLIVPCVL ISSMALLGFT LPPDSGEKLT LGVTILLSLT VFLNLVAESM PTTSDAVPLI
GTYFNCIMFM VASSVVLTVV VLNYHHRTAD IHEMPPWIKS VFLQWLPWIL RMGRPGRKIT
RKTILLSNRM KELELKERSS KSLLANVLDI DDDFRHTISG SQTAIGSSAS FGRPTTVEEH
HTAIGCNHKD LHLILKELQF ITARMRKADD EAELIGDWKF AAMVVDRFCL IVFTLFTIIA
TVTVLLSAPH IIVQ


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